co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G20820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:0043392: negative regulation of DNA binding	0.00E+00
3	GO:2000469: negative regulation of peroxidase activity	0.00E+00
4	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
5	GO:0009733: response to auxin	9.83E-06
6	GO:0030307: positive regulation of cell growth	9.92E-05
7	GO:0046620: regulation of organ growth	1.27E-04
8	GO:0009734: auxin-activated signaling pathway	1.40E-04
9	GO:0015904: tetracycline transport	1.69E-04
10	GO:0000023: maltose metabolic process	1.69E-04
11	GO:0000025: maltose catabolic process	1.69E-04
12	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	1.69E-04
13	GO:0030198: extracellular matrix organization	1.69E-04
14	GO:0046520: sphingoid biosynthetic process	1.69E-04
15	GO:0010480: microsporocyte differentiation	1.69E-04
16	GO:0005983: starch catabolic process	3.66E-04
17	GO:0006568: tryptophan metabolic process	3.83E-04
18	GO:0015824: proline transport	3.83E-04
19	GO:0009629: response to gravity	3.83E-04
20	GO:0007154: cell communication	3.83E-04
21	GO:0071497: cellular response to freezing	3.83E-04
22	GO:1900033: negative regulation of trichome patterning	3.83E-04
23	GO:0071398: cellular response to fatty acid	6.25E-04
24	GO:0033591: response to L-ascorbic acid	6.25E-04
25	GO:0010306: rhamnogalacturonan II biosynthetic process	8.93E-04
26	GO:0009723: response to ethylene	1.01E-03
27	GO:0009416: response to light stimulus	1.11E-03
28	GO:1901141: regulation of lignin biosynthetic process	1.18E-03
29	GO:0048629: trichome patterning	1.18E-03
30	GO:0042274: ribosomal small subunit biogenesis	1.18E-03
31	GO:0006221: pyrimidine nucleotide biosynthetic process	1.18E-03
32	GO:0042938: dipeptide transport	1.18E-03
33	GO:0009741: response to brassinosteroid	1.26E-03
34	GO:0016131: brassinosteroid metabolic process	1.50E-03
35	GO:1901657: glycosyl compound metabolic process	1.75E-03
36	GO:0010405: arabinogalactan protein metabolic process	1.85E-03
37	GO:0009959: negative gravitropism	1.85E-03
38	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.85E-03
39	GO:1902456: regulation of stomatal opening	1.85E-03
40	GO:0010252: auxin homeostasis	1.87E-03
41	GO:0009955: adaxial/abaxial pattern specification	2.22E-03
42	GO:0042026: protein refolding	2.22E-03
43	GO:0009082: branched-chain amino acid biosynthetic process	2.22E-03
44	GO:0006458: 'de novo' protein folding	2.22E-03
45	GO:0048509: regulation of meristem development	2.22E-03
46	GO:0009099: valine biosynthetic process	2.22E-03
47	GO:0030488: tRNA methylation	2.22E-03
48	GO:0010161: red light signaling pathway	2.61E-03
49	GO:0006955: immune response	2.61E-03
50	GO:0048437: floral organ development	2.61E-03
51	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.61E-03
52	GO:0009704: de-etiolation	3.02E-03
53	GO:0010099: regulation of photomorphogenesis	3.46E-03
54	GO:0009097: isoleucine biosynthetic process	3.46E-03
55	GO:0010100: negative regulation of photomorphogenesis	3.46E-03
56	GO:0006783: heme biosynthetic process	3.91E-03
57	GO:0009098: leucine biosynthetic process	4.38E-03
58	GO:0031425: chloroplast RNA processing	4.38E-03
59	GO:0009640: photomorphogenesis	4.70E-03
60	GO:0016441: posttranscriptional gene silencing	4.87E-03
61	GO:0010015: root morphogenesis	5.38E-03
62	GO:0000038: very long-chain fatty acid metabolic process	5.38E-03
63	GO:0009773: photosynthetic electron transport in photosystem I	5.38E-03
64	GO:0048229: gametophyte development	5.38E-03
65	GO:0006855: drug transmembrane transport	5.47E-03
66	GO:0015706: nitrate transport	5.91E-03
67	GO:0010075: regulation of meristem growth	6.46E-03
68	GO:0009767: photosynthetic electron transport chain	6.46E-03
69	GO:0010588: cotyledon vascular tissue pattern formation	6.46E-03
70	GO:2000012: regulation of auxin polar transport	6.46E-03
71	GO:0010102: lateral root morphogenesis	6.46E-03
72	GO:0010628: positive regulation of gene expression	6.46E-03
73	GO:0006006: glucose metabolic process	6.46E-03
74	GO:0009934: regulation of meristem structural organization	7.02E-03
75	GO:0045892: negative regulation of transcription, DNA-templated	7.60E-03
76	GO:0070588: calcium ion transmembrane transport	7.60E-03
77	GO:0019762: glucosinolate catabolic process	8.20E-03
78	GO:0005992: trehalose biosynthetic process	8.81E-03
79	GO:0010187: negative regulation of seed germination	8.81E-03
80	GO:0080147: root hair cell development	8.81E-03
81	GO:0010431: seed maturation	1.01E-02
82	GO:0061077: chaperone-mediated protein folding	1.01E-02
83	GO:0048278: vesicle docking	1.01E-02
84	GO:0016998: cell wall macromolecule catabolic process	1.01E-02
85	GO:0009753: response to jasmonic acid	1.06E-02
86	GO:0031348: negative regulation of defense response	1.08E-02
87	GO:0009693: ethylene biosynthetic process	1.14E-02
88	GO:0009686: gibberellin biosynthetic process	1.14E-02
89	GO:0007275: multicellular organism development	1.24E-02
90	GO:0010118: stomatal movement	1.36E-02
91	GO:0048653: anther development	1.36E-02
92	GO:0042335: cuticle development	1.36E-02
93	GO:0080022: primary root development	1.36E-02
94	GO:0010087: phloem or xylem histogenesis	1.36E-02
95	GO:0010268: brassinosteroid homeostasis	1.43E-02
96	GO:0009960: endosperm development	1.43E-02
97	GO:0010305: leaf vascular tissue pattern formation	1.43E-02
98	GO:0048868: pollen tube development	1.43E-02
99	GO:0040008: regulation of growth	1.49E-02
100	GO:0061025: membrane fusion	1.51E-02
101	GO:0009646: response to absence of light	1.51E-02
102	GO:0010150: leaf senescence	1.56E-02
103	GO:0000302: response to reactive oxygen species	1.66E-02
104	GO:0010583: response to cyclopentenone	1.74E-02
105	GO:0009739: response to gibberellin	1.75E-02
106	GO:0009409: response to cold	2.21E-02
107	GO:0010029: regulation of seed germination	2.24E-02
108	GO:0006906: vesicle fusion	2.33E-02
109	GO:0015995: chlorophyll biosynthetic process	2.42E-02
110	GO:0005975: carbohydrate metabolic process	2.61E-02
111	GO:0009860: pollen tube growth	2.61E-02
112	GO:0048366: leaf development	2.85E-02
113	GO:0009631: cold acclimation	2.89E-02
114	GO:0048527: lateral root development	2.89E-02
115	GO:0006865: amino acid transport	2.99E-02
116	GO:0080167: response to karrikin	3.00E-02
117	GO:0009651: response to salt stress	3.07E-02
118	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.10E-02
119	GO:0034599: cellular response to oxidative stress	3.18E-02
120	GO:0006887: exocytosis	3.49E-02
121	GO:0006631: fatty acid metabolic process	3.49E-02
122	GO:0008283: cell proliferation	3.69E-02
123	GO:0009926: auxin polar transport	3.69E-02
124	GO:0008643: carbohydrate transport	3.91E-02
125	GO:0009737: response to abscisic acid	4.28E-02
126	GO:0016042: lipid catabolic process	4.29E-02
127	GO:0009751: response to salicylic acid	4.35E-02
128	GO:0006857: oligopeptide transport	4.79E-02
129	GO:0009909: regulation of flower development	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005201: extracellular matrix structural constituent	0.00E+00
2	GO:0005363: maltose transmembrane transporter activity	0.00E+00
3	GO:0071633: dihydroceramidase activity	0.00E+00
4	GO:0000170: sphingosine hydroxylase activity	1.69E-04
5	GO:0050139: nicotinate-N-glucosyltransferase activity	1.69E-04
6	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.69E-04
7	GO:0042834: peptidoglycan binding	1.69E-04
8	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	1.69E-04
9	GO:0010313: phytochrome binding	1.69E-04
10	GO:0004134: 4-alpha-glucanotransferase activity	1.69E-04
11	GO:0008395: steroid hydroxylase activity	1.69E-04
12	GO:0042284: sphingolipid delta-4 desaturase activity	3.83E-04
13	GO:0008493: tetracycline transporter activity	3.83E-04
14	GO:0015193: L-proline transmembrane transporter activity	6.25E-04
15	GO:0005528: FK506 binding	6.49E-04
16	GO:0052655: L-valine transaminase activity	8.93E-04
17	GO:0009041: uridylate kinase activity	8.93E-04
18	GO:0052656: L-isoleucine transaminase activity	8.93E-04
19	GO:0052654: L-leucine transaminase activity	8.93E-04
20	GO:0042936: dipeptide transporter activity	1.18E-03
21	GO:0004084: branched-chain-amino-acid transaminase activity	1.18E-03
22	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.78E-03
23	GO:0080030: methyl indole-3-acetate esterase activity	1.85E-03
24	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.85E-03
25	GO:0004130: cytochrome-c peroxidase activity	1.85E-03
26	GO:0016688: L-ascorbate peroxidase activity	1.85E-03
27	GO:0003968: RNA-directed 5'-3' RNA polymerase activity	1.85E-03
28	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.22E-03
29	GO:0102483: scopolin beta-glucosidase activity	2.61E-03
30	GO:0015238: drug transmembrane transporter activity	3.03E-03
31	GO:0008173: RNA methyltransferase activity	3.46E-03
32	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.91E-03
33	GO:0008422: beta-glucosidase activity	3.98E-03
34	GO:0030234: enzyme regulator activity	4.87E-03
35	GO:0004805: trehalose-phosphatase activity	4.87E-03
36	GO:0044183: protein binding involved in protein folding	5.38E-03
37	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.47E-03
38	GO:0000976: transcription regulatory region sequence-specific DNA binding	5.91E-03
39	GO:0005262: calcium channel activity	6.46E-03
40	GO:0008146: sulfotransferase activity	7.60E-03
41	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.20E-03
42	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.20E-03
43	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.20E-03
44	GO:0031418: L-ascorbic acid binding	8.81E-03
45	GO:0005345: purine nucleobase transmembrane transporter activity	9.44E-03
46	GO:0033612: receptor serine/threonine kinase binding	1.01E-02
47	GO:0003964: RNA-directed DNA polymerase activity	1.01E-02
48	GO:0008514: organic anion transmembrane transporter activity	1.21E-02
49	GO:0003727: single-stranded RNA binding	1.21E-02
50	GO:0005506: iron ion binding	1.37E-02
51	GO:0003713: transcription coactivator activity	1.43E-02
52	GO:0015297: antiporter activity	1.49E-02
53	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.50E-02
54	GO:0005215: transporter activity	1.63E-02
55	GO:0016759: cellulose synthase activity	1.90E-02
56	GO:0005200: structural constituent of cytoskeleton	1.99E-02
57	GO:0016788: hydrolase activity, acting on ester bonds	2.47E-02
58	GO:0020037: heme binding	2.77E-02
59	GO:0004497: monooxygenase activity	3.00E-02
60	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.08E-02
61	GO:0019825: oxygen binding	3.13E-02
62	GO:0000149: SNARE binding	3.28E-02
63	GO:0042393: histone binding	3.38E-02
64	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	3.59E-02
65	GO:0005484: SNAP receptor activity	3.69E-02
66	GO:0004871: signal transducer activity	3.76E-02
67	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	3.99E-02
68	GO:0016298: lipase activity	4.68E-02
69	GO:0044212: transcription regulatory region DNA binding	4.83E-02
70	GO:0003777: microtubule motor activity	4.91E-02
71	GO:0015171: amino acid transmembrane transporter activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0019897: extrinsic component of plasma membrane	6.25E-04
2	GO:0009544: chloroplast ATP synthase complex	1.18E-03
3	GO:0009501: amyloplast	3.02E-03
4	GO:0010494: cytoplasmic stress granule	3.91E-03
5	GO:0009654: photosystem II oxygen evolving complex	9.44E-03
6	GO:0009543: chloroplast thylakoid lumen	1.13E-02
7	GO:0005770: late endosome	1.43E-02
8	GO:0019898: extrinsic component of membrane	1.58E-02
9	GO:0046658: anchored component of plasma membrane	2.07E-02
10	GO:0000932: P-body	2.16E-02
11	GO:0031201: SNARE complex	3.49E-02
12	GO:0031902: late endosome membrane	3.49E-02
13	GO:0031225: anchored component of membrane	3.51E-02
14	GO:0090406: pollen tube	3.69E-02