co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G20230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
3	GO:0009733: response to auxin	1.60E-05
4	GO:0046620: regulation of organ growth	2.41E-04
5	GO:0006285: base-excision repair, AP site formation	2.57E-04
6	GO:0046520: sphingoid biosynthetic process	2.57E-04
7	GO:0006741: NADP biosynthetic process	5.68E-04
8	GO:0031648: protein destabilization	5.68E-04
9	GO:0016255: attachment of GPI anchor to protein	9.22E-04
10	GO:0071398: cellular response to fatty acid	9.22E-04
11	GO:0048575: short-day photoperiodism, flowering	9.22E-04
12	GO:0019674: NAD metabolic process	9.22E-04
13	GO:0090506: axillary shoot meristem initiation	9.22E-04
14	GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion	9.22E-04
15	GO:0040008: regulation of growth	9.73E-04
16	GO:0006863: purine nucleobase transport	1.04E-03
17	GO:0010321: regulation of vegetative phase change	1.32E-03
18	GO:0019363: pyridine nucleotide biosynthetic process	1.32E-03
19	GO:0010371: regulation of gibberellin biosynthetic process	1.32E-03
20	GO:0009686: gibberellin biosynthetic process	1.65E-03
21	GO:0009755: hormone-mediated signaling pathway	1.76E-03
22	GO:0009734: auxin-activated signaling pathway	2.14E-03
23	GO:0010438: cellular response to sulfur starvation	2.25E-03
24	GO:0045487: gibberellin catabolic process	2.25E-03
25	GO:1902456: regulation of stomatal opening	2.77E-03
26	GO:0003006: developmental process involved in reproduction	2.77E-03
27	GO:0010358: leaf shaping	2.77E-03
28	GO:0071554: cell wall organization or biogenesis	2.79E-03
29	GO:0032502: developmental process	2.98E-03
30	GO:0031930: mitochondria-nucleus signaling pathway	3.33E-03
31	GO:0009567: double fertilization forming a zygote and endosperm	3.38E-03
32	GO:0006402: mRNA catabolic process	4.56E-03
33	GO:0010439: regulation of glucosinolate biosynthetic process	4.56E-03
34	GO:0009690: cytokinin metabolic process	4.56E-03
35	GO:0009704: de-etiolation	4.56E-03
36	GO:2000070: regulation of response to water deprivation	4.56E-03
37	GO:0009819: drought recovery	4.56E-03
38	GO:0042255: ribosome assembly	4.56E-03
39	GO:0006353: DNA-templated transcription, termination	4.56E-03
40	GO:0048573: photoperiodism, flowering	4.74E-03
41	GO:0051865: protein autoubiquitination	5.92E-03
42	GO:0009056: catabolic process	5.92E-03
43	GO:0048507: meristem development	5.92E-03
44	GO:0009739: response to gibberellin	6.44E-03
45	GO:0009867: jasmonic acid mediated signaling pathway	6.65E-03
46	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.40E-03
47	GO:0009641: shade avoidance	7.40E-03
48	GO:0006631: fatty acid metabolic process	7.91E-03
49	GO:0009682: induced systemic resistance	8.19E-03
50	GO:0009926: auxin polar transport	8.59E-03
51	GO:0010105: negative regulation of ethylene-activated signaling pathway	9.00E-03
52	GO:0012501: programmed cell death	9.00E-03
53	GO:0010582: floral meristem determinacy	9.00E-03
54	GO:0010628: positive regulation of gene expression	9.85E-03
55	GO:2000028: regulation of photoperiodism, flowering	9.85E-03
56	GO:0009767: photosynthetic electron transport chain	9.85E-03
57	GO:0010588: cotyledon vascular tissue pattern formation	9.85E-03
58	GO:0010102: lateral root morphogenesis	9.85E-03
59	GO:0010223: secondary shoot formation	1.07E-02
60	GO:0009887: animal organ morphogenesis	1.07E-02
61	GO:0006302: double-strand break repair	1.07E-02
62	GO:0048467: gynoecium development	1.07E-02
63	GO:0006351: transcription, DNA-templated	1.12E-02
64	GO:0090351: seedling development	1.16E-02
65	GO:0080147: root hair cell development	1.35E-02
66	GO:0005992: trehalose biosynthetic process	1.35E-02
67	GO:0048367: shoot system development	1.42E-02
68	GO:0051321: meiotic cell cycle	1.55E-02
69	GO:0010431: seed maturation	1.55E-02
70	GO:0006306: DNA methylation	1.55E-02
71	GO:0045892: negative regulation of transcription, DNA-templated	1.64E-02
72	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.65E-02
73	GO:0010082: regulation of root meristem growth	1.76E-02
74	GO:0001944: vasculature development	1.76E-02
75	GO:0009625: response to insect	1.76E-02
76	GO:0009693: ethylene biosynthetic process	1.76E-02
77	GO:0071215: cellular response to abscisic acid stimulus	1.76E-02
78	GO:0045492: xylan biosynthetic process	1.86E-02
79	GO:0006284: base-excision repair	1.86E-02
80	GO:0080022: primary root development	2.09E-02
81	GO:0010087: phloem or xylem histogenesis	2.09E-02
82	GO:0010118: stomatal movement	2.09E-02
83	GO:0010182: sugar mediated signaling pathway	2.20E-02
84	GO:0009741: response to brassinosteroid	2.20E-02
85	GO:0010268: brassinosteroid homeostasis	2.20E-02
86	GO:0009960: endosperm development	2.20E-02
87	GO:0010305: leaf vascular tissue pattern formation	2.20E-02
88	GO:0009753: response to jasmonic acid	2.29E-02
89	GO:0016132: brassinosteroid biosynthetic process	2.56E-02
90	GO:0010583: response to cyclopentenone	2.68E-02
91	GO:0019761: glucosinolate biosynthetic process	2.68E-02
92	GO:1901657: glycosyl compound metabolic process	2.80E-02
93	GO:0030163: protein catabolic process	2.80E-02
94	GO:0016567: protein ubiquitination	2.86E-02
95	GO:0016125: sterol metabolic process	2.93E-02
96	GO:0010027: thylakoid membrane organization	3.32E-02
97	GO:0009908: flower development	3.78E-02
98	GO:0009826: unidimensional cell growth	4.26E-02
99	GO:0009416: response to light stimulus	4.28E-02
100	GO:0048527: lateral root development	4.45E-02
101	GO:0007568: aging	4.45E-02
102	GO:0006865: amino acid transport	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0005345: purine nucleobase transmembrane transporter activity	9.22E-05
3	GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity	2.57E-04
4	GO:0042736: NADH kinase activity	2.57E-04
5	GO:0010012: steroid 22-alpha hydroxylase activity	2.57E-04
6	GO:0000170: sphingosine hydroxylase activity	2.57E-04
7	GO:0045543: gibberellin 2-beta-dioxygenase activity	5.68E-04
8	GO:0010296: prenylcysteine methylesterase activity	5.68E-04
9	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	5.68E-04
10	GO:0042284: sphingolipid delta-4 desaturase activity	5.68E-04
11	GO:0003906: DNA-(apurinic or apyrimidinic site) lyase activity	9.22E-04
12	GO:0045544: gibberellin 20-oxidase activity	1.32E-03
13	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.32E-03
14	GO:0019104: DNA N-glycosylase activity	1.76E-03
15	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.25E-03
16	GO:0004523: RNA-DNA hybrid ribonuclease activity	2.25E-03
17	GO:0080030: methyl indole-3-acetate esterase activity	2.77E-03
18	GO:0004709: MAP kinase kinase kinase activity	2.77E-03
19	GO:0004518: nuclease activity	2.98E-03
20	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.33E-03
21	GO:0016832: aldehyde-lyase activity	3.33E-03
22	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	3.33E-03
23	GO:0016413: O-acetyltransferase activity	3.80E-03
24	GO:0003951: NAD+ kinase activity	5.22E-03
25	GO:0003700: transcription factor activity, sequence-specific DNA binding	5.43E-03
26	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.92E-03
27	GO:0004805: trehalose-phosphatase activity	7.40E-03
28	GO:0043621: protein self-association	9.29E-03
29	GO:0003712: transcription cofactor activity	1.16E-02
30	GO:0004190: aspartic-type endopeptidase activity	1.16E-02
31	GO:0031418: L-ascorbic acid binding	1.35E-02
32	GO:0033612: receptor serine/threonine kinase binding	1.55E-02
33	GO:0003964: RNA-directed DNA polymerase activity	1.55E-02
34	GO:0008408: 3'-5' exonuclease activity	1.55E-02
35	GO:0016874: ligase activity	1.56E-02
36	GO:0004871: signal transducer activity	1.71E-02
37	GO:0003677: DNA binding	1.80E-02
38	GO:0003727: single-stranded RNA binding	1.86E-02
39	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.13E-02
40	GO:0005199: structural constituent of cell wall	2.20E-02
41	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.20E-02
42	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.36E-02
43	GO:0016759: cellulose synthase activity	2.93E-02
44	GO:0051213: dioxygenase activity	3.32E-02
45	GO:0102483: scopolin beta-glucosidase activity	3.73E-02
46	GO:0008236: serine-type peptidase activity	3.87E-02
47	GO:0030145: manganese ion binding	4.45E-02
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.45E-02
49	GO:0016788: hydrolase activity, acting on ester bonds	4.50E-02
50	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0000791: euchromatin	2.57E-04
2	GO:0030870: Mre11 complex	5.68E-04
3	GO:0042765: GPI-anchor transamidase complex	9.22E-04
4	GO:0009654: photosystem II oxygen evolving complex	1.27E-03
5	GO:0009544: chloroplast ATP synthase complex	1.76E-03
6	GO:0000795: synaptonemal complex	2.25E-03
7	GO:0019898: extrinsic component of membrane	2.61E-03
8	GO:0010494: cytoplasmic stress granule	5.92E-03
9	GO:0042644: chloroplast nucleoid	5.92E-03
10	GO:0030095: chloroplast photosystem II	1.07E-02
11	GO:0005875: microtubule associated complex	1.25E-02
12	GO:0009532: plastid stroma	1.55E-02
13	GO:0009504: cell plate	2.43E-02
14	GO:0000785: chromatin	2.68E-02
15	GO:0030529: intracellular ribonucleoprotein complex	3.32E-02
16	GO:0000932: P-body	3.32E-02
17	GO:0005634: nucleus	4.79E-02