Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G19500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009583: detection of light stimulus0.00E+00
2GO:2000023: regulation of lateral root development0.00E+00
3GO:0071000: response to magnetism0.00E+00
4GO:0072387: flavin adenine dinucleotide metabolic process3.73E-06
5GO:0010266: response to vitamin B13.73E-06
6GO:0010343: singlet oxygen-mediated programmed cell death1.03E-05
7GO:1901529: positive regulation of anion channel activity1.03E-05
8GO:0006898: receptor-mediated endocytosis1.03E-05
9GO:0010617: circadian regulation of calcium ion oscillation1.03E-05
10GO:0099402: plant organ development1.03E-05
11GO:0045493: xylan catabolic process1.93E-05
12GO:1902448: positive regulation of shade avoidance1.93E-05
13GO:1901672: positive regulation of systemic acquired resistance1.93E-05
14GO:0016045: detection of bacterium1.93E-05
15GO:1901332: negative regulation of lateral root development3.02E-05
16GO:1902347: response to strigolactone4.28E-05
17GO:0009229: thiamine diphosphate biosynthetic process5.67E-05
18GO:0006465: signal peptide processing5.67E-05
19GO:0010117: photoprotection5.67E-05
20GO:0046283: anthocyanin-containing compound metabolic process5.67E-05
21GO:1901371: regulation of leaf morphogenesis7.20E-05
22GO:0009228: thiamine biosynthetic process7.20E-05
23GO:0060918: auxin transport7.20E-05
24GO:0042793: transcription from plastid promoter7.20E-05
25GO:0010310: regulation of hydrogen peroxide metabolic process8.84E-05
26GO:0010244: response to low fluence blue light stimulus by blue low-fluence system8.84E-05
27GO:0051510: regulation of unidimensional cell growth1.06E-04
28GO:1900426: positive regulation of defense response to bacterium1.84E-04
29GO:0009638: phototropism1.84E-04
30GO:0010075: regulation of meristem growth2.72E-04
31GO:0009785: blue light signaling pathway2.72E-04
32GO:2000377: regulation of reactive oxygen species metabolic process3.67E-04
33GO:0006338: chromatin remodeling3.67E-04
34GO:0010073: meristem maintenance3.93E-04
35GO:0006508: proteolysis4.23E-04
36GO:0010118: stomatal movement5.49E-04
37GO:0042752: regulation of circadian rhythm6.04E-04
38GO:0009646: response to absence of light6.04E-04
39GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.68E-04
40GO:0010411: xyloglucan metabolic process9.29E-04
41GO:0018298: protein-chromophore linkage9.92E-04
42GO:0010311: lateral root formation1.02E-03
43GO:0010218: response to far red light1.06E-03
44GO:0048527: lateral root development1.09E-03
45GO:0009637: response to blue light1.15E-03
46GO:0010114: response to red light1.36E-03
47GO:0009640: photomorphogenesis1.36E-03
48GO:0008283: cell proliferation1.36E-03
49GO:0009644: response to high light intensity1.43E-03
50GO:0009733: response to auxin1.45E-03
51GO:0009736: cytokinin-activated signaling pathway1.65E-03
52GO:0046686: response to cadmium ion2.00E-03
53GO:0016569: covalent chromatin modification2.01E-03
54GO:0040008: regulation of growth2.93E-03
55GO:0007623: circadian rhythm3.02E-03
56GO:0009739: response to gibberellin3.26E-03
57GO:0009723: response to ethylene4.49E-03
58GO:0048366: leaf development4.54E-03
59GO:0046777: protein autophosphorylation4.93E-03
60GO:0045892: negative regulation of transcription, DNA-templated5.38E-03
61GO:0048364: root development6.33E-03
62GO:0009734: auxin-activated signaling pathway7.80E-03
63GO:0009416: response to light stimulus9.17E-03
64GO:0045893: positive regulation of transcription, DNA-templated1.01E-02
65GO:0006457: protein folding1.10E-02
66GO:0009414: response to water deprivation1.48E-02
67GO:0071555: cell wall organization1.51E-02
68GO:0007275: multicellular organism development2.45E-02
69GO:0009793: embryo development ending in seed dormancy2.75E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
3GO:0080041: ADP-ribose pyrophosphohydrolase activity1.03E-05
4GO:0008237: metallopeptidase activity1.14E-05
5GO:0016805: dipeptidase activity1.93E-05
6GO:0032549: ribonucleoside binding1.93E-05
7GO:0004222: metalloendopeptidase activity2.07E-05
8GO:0009882: blue light photoreceptor activity3.02E-05
9GO:0046556: alpha-L-arabinofuranosidase activity4.28E-05
10GO:0009044: xylan 1,4-beta-xylosidase activity4.28E-05
11GO:0071949: FAD binding1.63E-04
12GO:0003678: DNA helicase activity1.63E-04
13GO:0001054: RNA polymerase I activity2.27E-04
14GO:0046872: metal ion binding2.86E-04
15GO:0051536: iron-sulfur cluster binding3.67E-04
16GO:0004176: ATP-dependent peptidase activity4.18E-04
17GO:0016887: ATPase activity5.85E-04
18GO:0030246: carbohydrate binding8.83E-04
19GO:0051539: 4 iron, 4 sulfur cluster binding1.25E-03
20GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.65E-03
21GO:0004386: helicase activity2.22E-03
22GO:0016829: lyase activity2.56E-03
23GO:0042802: identical protein binding3.55E-03
24GO:0042803: protein homodimerization activity5.50E-03
25GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.12E-02
26GO:0003824: catalytic activity1.61E-02
27GO:0046983: protein dimerization activity1.86E-02
28GO:0003677: DNA binding1.93E-02
29GO:0004672: protein kinase activity1.99E-02
30GO:0005524: ATP binding2.71E-02
31GO:0043565: sequence-specific DNA binding4.84E-02
RankGO TermAdjusted P value
1GO:0016605: PML body1.93E-05
2GO:0031982: vesicle1.24E-04
3GO:0005736: DNA-directed RNA polymerase I complex1.63E-04
4GO:0016604: nuclear body1.84E-04
5GO:0009508: plastid chromosome2.72E-04
6GO:0009295: nucleoid7.77E-04
7GO:0009507: chloroplast3.93E-03
8GO:0048046: apoplast4.60E-03
9GO:0031969: chloroplast membrane4.71E-03
10GO:0009536: plastid1.75E-02
11GO:0009505: plant-type cell wall1.77E-02
12GO:0005789: endoplasmic reticulum membrane2.04E-02
13GO:0005618: cell wall4.04E-02
14GO:0009941: chloroplast envelope4.56E-02
15GO:0005773: vacuole4.97E-02
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Gene type



Gene DE type