GO Enrichment Analysis of Co-expressed Genes with
AT4G19060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 2 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 3 | GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA | 0.00E+00 |
| 4 | GO:0090063: positive regulation of microtubule nucleation | 1.58E-04 |
| 5 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.58E-04 |
| 6 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 1.58E-04 |
| 7 | GO:0043971: histone H3-K18 acetylation | 1.58E-04 |
| 8 | GO:0019478: D-amino acid catabolic process | 1.58E-04 |
| 9 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 3.60E-04 |
| 10 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 3.60E-04 |
| 11 | GO:0033566: gamma-tubulin complex localization | 3.60E-04 |
| 12 | GO:0080175: phragmoplast microtubule organization | 3.60E-04 |
| 13 | GO:0009451: RNA modification | 3.74E-04 |
| 14 | GO:0080188: RNA-directed DNA methylation | 4.83E-04 |
| 15 | GO:0006013: mannose metabolic process | 5.89E-04 |
| 16 | GO:0009650: UV protection | 8.43E-04 |
| 17 | GO:0010306: rhamnogalacturonan II biosynthetic process | 8.43E-04 |
| 18 | GO:1902290: positive regulation of defense response to oomycetes | 8.43E-04 |
| 19 | GO:0015846: polyamine transport | 1.12E-03 |
| 20 | GO:0044205: 'de novo' UMP biosynthetic process | 1.12E-03 |
| 21 | GO:0009956: radial pattern formation | 1.12E-03 |
| 22 | GO:0016558: protein import into peroxisome matrix | 1.41E-03 |
| 23 | GO:0051225: spindle assembly | 1.41E-03 |
| 24 | GO:0009616: virus induced gene silencing | 1.41E-03 |
| 25 | GO:0071493: cellular response to UV-B | 1.41E-03 |
| 26 | GO:0002229: defense response to oomycetes | 1.41E-03 |
| 27 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.74E-03 |
| 28 | GO:0035194: posttranscriptional gene silencing by RNA | 1.74E-03 |
| 29 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 1.74E-03 |
| 30 | GO:0009088: threonine biosynthetic process | 2.09E-03 |
| 31 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.09E-03 |
| 32 | GO:0006401: RNA catabolic process | 2.45E-03 |
| 33 | GO:0009610: response to symbiotic fungus | 2.45E-03 |
| 34 | GO:0007050: cell cycle arrest | 2.45E-03 |
| 35 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 2.45E-03 |
| 36 | GO:0006353: DNA-templated transcription, termination | 2.84E-03 |
| 37 | GO:0044030: regulation of DNA methylation | 3.25E-03 |
| 38 | GO:0009657: plastid organization | 3.25E-03 |
| 39 | GO:0009056: catabolic process | 3.67E-03 |
| 40 | GO:0008202: steroid metabolic process | 4.12E-03 |
| 41 | GO:1900426: positive regulation of defense response to bacterium | 4.12E-03 |
| 42 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.05E-03 |
| 43 | GO:0016485: protein processing | 5.05E-03 |
| 44 | GO:0048229: gametophyte development | 5.05E-03 |
| 45 | GO:0031347: regulation of defense response | 5.19E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.55E-03 |
| 47 | GO:0010540: basipetal auxin transport | 6.59E-03 |
| 48 | GO:0010020: chloroplast fission | 6.59E-03 |
| 49 | GO:0009933: meristem structural organization | 6.59E-03 |
| 50 | GO:0009825: multidimensional cell growth | 7.13E-03 |
| 51 | GO:0009116: nucleoside metabolic process | 8.27E-03 |
| 52 | GO:0007010: cytoskeleton organization | 8.27E-03 |
| 53 | GO:0006306: DNA methylation | 9.46E-03 |
| 54 | GO:0016226: iron-sulfur cluster assembly | 1.01E-02 |
| 55 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.01E-02 |
| 56 | GO:0042127: regulation of cell proliferation | 1.14E-02 |
| 57 | GO:0010051: xylem and phloem pattern formation | 1.27E-02 |
| 58 | GO:0048868: pollen tube development | 1.34E-02 |
| 59 | GO:0010305: leaf vascular tissue pattern formation | 1.34E-02 |
| 60 | GO:0009793: embryo development ending in seed dormancy | 1.40E-02 |
| 61 | GO:0008654: phospholipid biosynthetic process | 1.48E-02 |
| 62 | GO:0006635: fatty acid beta-oxidation | 1.56E-02 |
| 63 | GO:0080156: mitochondrial mRNA modification | 1.56E-02 |
| 64 | GO:0031047: gene silencing by RNA | 1.63E-02 |
| 65 | GO:0007264: small GTPase mediated signal transduction | 1.63E-02 |
| 66 | GO:0016126: sterol biosynthetic process | 2.02E-02 |
| 67 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.10E-02 |
| 68 | GO:0006974: cellular response to DNA damage stimulus | 2.19E-02 |
| 69 | GO:0009658: chloroplast organization | 2.21E-02 |
| 70 | GO:0005975: carbohydrate metabolic process | 2.28E-02 |
| 71 | GO:0009832: plant-type cell wall biogenesis | 2.53E-02 |
| 72 | GO:0009926: auxin polar transport | 3.46E-02 |
| 73 | GO:0009965: leaf morphogenesis | 3.76E-02 |
| 74 | GO:0016042: lipid catabolic process | 3.92E-02 |
| 75 | GO:0006629: lipid metabolic process | 4.03E-02 |
| 76 | GO:0009664: plant-type cell wall organization | 4.07E-02 |
| 77 | GO:0006397: mRNA processing | 4.21E-02 |
| 78 | GO:0006364: rRNA processing | 4.28E-02 |
| 79 | GO:0008152: metabolic process | 4.44E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0019808: polyamine binding | 0.00E+00 |
| 4 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 5 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 6 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 1.58E-04 |
| 7 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 1.58E-04 |
| 8 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 1.58E-04 |
| 9 | GO:0004795: threonine synthase activity | 1.58E-04 |
| 10 | GO:0019903: protein phosphatase binding | 3.60E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 3.60E-04 |
| 12 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.89E-04 |
| 13 | GO:0000254: C-4 methylsterol oxidase activity | 8.43E-04 |
| 14 | GO:0010385: double-stranded methylated DNA binding | 1.12E-03 |
| 15 | GO:0019901: protein kinase binding | 1.32E-03 |
| 16 | GO:0004462: lactoylglutathione lyase activity | 1.74E-03 |
| 17 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.74E-03 |
| 18 | GO:0004519: endonuclease activity | 1.99E-03 |
| 19 | GO:0004559: alpha-mannosidase activity | 2.09E-03 |
| 20 | GO:0004806: triglyceride lipase activity | 2.38E-03 |
| 21 | GO:0019899: enzyme binding | 2.45E-03 |
| 22 | GO:0008142: oxysterol binding | 3.25E-03 |
| 23 | GO:0003724: RNA helicase activity | 3.25E-03 |
| 24 | GO:0008970: phosphatidylcholine 1-acylhydrolase activity | 3.25E-03 |
| 25 | GO:0015020: glucuronosyltransferase activity | 4.58E-03 |
| 26 | GO:0004713: protein tyrosine kinase activity | 4.58E-03 |
| 27 | GO:0043621: protein self-association | 4.64E-03 |
| 28 | GO:0008327: methyl-CpG binding | 5.05E-03 |
| 29 | GO:0009982: pseudouridine synthase activity | 6.06E-03 |
| 30 | GO:0000175: 3'-5'-exoribonuclease activity | 6.06E-03 |
| 31 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 6.59E-03 |
| 32 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 7.50E-03 |
| 33 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 7.50E-03 |
| 34 | GO:0003714: transcription corepressor activity | 8.27E-03 |
| 35 | GO:0003924: GTPase activity | 8.66E-03 |
| 36 | GO:0004176: ATP-dependent peptidase activity | 9.46E-03 |
| 37 | GO:0008408: 3'-5' exonuclease activity | 9.46E-03 |
| 38 | GO:0004540: ribonuclease activity | 9.46E-03 |
| 39 | GO:0004402: histone acetyltransferase activity | 1.27E-02 |
| 40 | GO:0008080: N-acetyltransferase activity | 1.34E-02 |
| 41 | GO:0008017: microtubule binding | 1.49E-02 |
| 42 | GO:0008194: UDP-glycosyltransferase activity | 1.59E-02 |
| 43 | GO:0000166: nucleotide binding | 1.79E-02 |
| 44 | GO:0008237: metallopeptidase activity | 1.86E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 2.25E-02 |
| 46 | GO:0016740: transferase activity | 2.31E-02 |
| 47 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.54E-02 |
| 48 | GO:0030246: carbohydrate binding | 2.61E-02 |
| 49 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.62E-02 |
| 50 | GO:0004222: metalloendopeptidase activity | 2.62E-02 |
| 51 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.71E-02 |
| 52 | GO:0052689: carboxylic ester hydrolase activity | 3.03E-02 |
| 53 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 3.08E-02 |
| 54 | GO:0042393: histone binding | 3.17E-02 |
| 55 | GO:0005525: GTP binding | 3.34E-02 |
| 56 | GO:0042803: protein homodimerization activity | 3.43E-02 |
| 57 | GO:0035091: phosphatidylinositol binding | 3.66E-02 |
| 58 | GO:0016301: kinase activity | 3.90E-02 |
| 59 | GO:0003723: RNA binding | 4.42E-02 |
| 60 | GO:0003777: microtubule motor activity | 4.60E-02 |
| 61 | GO:0004674: protein serine/threonine kinase activity | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035452: extrinsic component of plastid membrane | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0010370: perinucleolar chromocenter | 1.58E-04 |
| 4 | GO:0005819: spindle | 4.18E-04 |
| 5 | GO:0070652: HAUS complex | 5.89E-04 |
| 6 | GO:0009531: secondary cell wall | 8.43E-04 |
| 7 | GO:0000930: gamma-tubulin complex | 1.12E-03 |
| 8 | GO:0009505: plant-type cell wall | 1.30E-03 |
| 9 | GO:0000178: exosome (RNase complex) | 1.41E-03 |
| 10 | GO:0010005: cortical microtubule, transverse to long axis | 2.09E-03 |
| 11 | GO:0000922: spindle pole | 3.67E-03 |
| 12 | GO:0005720: nuclear heterochromatin | 3.67E-03 |
| 13 | GO:0055028: cortical microtubule | 4.58E-03 |
| 14 | GO:0005938: cell cortex | 6.06E-03 |
| 15 | GO:0016602: CCAAT-binding factor complex | 6.06E-03 |
| 16 | GO:0000419: DNA-directed RNA polymerase V complex | 7.69E-03 |
| 17 | GO:0043231: intracellular membrane-bounded organelle | 9.81E-03 |
| 18 | GO:0009524: phragmoplast | 1.09E-02 |
| 19 | GO:0009507: chloroplast | 1.10E-02 |
| 20 | GO:0010319: stromule | 1.86E-02 |
| 21 | GO:0000932: P-body | 2.02E-02 |
| 22 | GO:0009707: chloroplast outer membrane | 2.44E-02 |
| 23 | GO:0005874: microtubule | 2.65E-02 |
| 24 | GO:0009570: chloroplast stroma | 3.22E-02 |
| 25 | GO:0031977: thylakoid lumen | 3.27E-02 |
| 26 | GO:0005856: cytoskeleton | 3.76E-02 |
| 27 | GO:0005635: nuclear envelope | 4.49E-02 |