co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061157: mRNA destabilization	0.00E+00
2	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
4	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
5	GO:0080127: fruit septum development	0.00E+00
6	GO:0009733: response to auxin	2.09E-08
7	GO:0009734: auxin-activated signaling pathway	2.93E-07
8	GO:0046620: regulation of organ growth	1.53E-05
9	GO:0048497: maintenance of floral organ identity	1.43E-04
10	GO:0034757: negative regulation of iron ion transport	3.92E-04
11	GO:0006434: seryl-tRNA aminoacylation	3.92E-04
12	GO:0000025: maltose catabolic process	3.92E-04
13	GO:0046520: sphingoid biosynthetic process	3.92E-04
14	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	3.92E-04
15	GO:0032958: inositol phosphate biosynthetic process	3.92E-04
16	GO:0010480: microsporocyte differentiation	3.92E-04
17	GO:0015904: tetracycline transport	3.92E-04
18	GO:0040008: regulation of growth	5.14E-04
19	GO:1900865: chloroplast RNA modification	7.75E-04
20	GO:0043039: tRNA aminoacylation	8.49E-04
21	GO:0006423: cysteinyl-tRNA aminoacylation	8.49E-04
22	GO:1900871: chloroplast mRNA modification	8.49E-04
23	GO:0010271: regulation of chlorophyll catabolic process	8.49E-04
24	GO:0080009: mRNA methylation	8.49E-04
25	GO:0009786: regulation of asymmetric cell division	8.49E-04
26	GO:0048829: root cap development	9.02E-04
27	GO:0010588: cotyledon vascular tissue pattern formation	1.34E-03
28	GO:0090506: axillary shoot meristem initiation	1.38E-03
29	GO:0033591: response to L-ascorbic acid	1.38E-03
30	GO:0080117: secondary growth	1.38E-03
31	GO:0071398: cellular response to fatty acid	1.38E-03
32	GO:0000160: phosphorelay signal transduction system	1.52E-03
33	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.87E-03
34	GO:0043207: response to external biotic stimulus	1.99E-03
35	GO:0010371: regulation of gibberellin biosynthetic process	1.99E-03
36	GO:0006020: inositol metabolic process	1.99E-03
37	GO:0009926: auxin polar transport	2.66E-03
38	GO:0006021: inositol biosynthetic process	2.67E-03
39	GO:0009755: hormone-mediated signaling pathway	2.67E-03
40	GO:0006351: transcription, DNA-templated	2.73E-03
41	GO:0071215: cellular response to abscisic acid stimulus	3.04E-03
42	GO:0010438: cellular response to sulfur starvation	3.42E-03
43	GO:0045487: gibberellin catabolic process	3.42E-03
44	GO:0016131: brassinosteroid metabolic process	3.42E-03
45	GO:0010087: phloem or xylem histogenesis	3.87E-03
46	GO:0009736: cytokinin-activated signaling pathway	3.90E-03
47	GO:0010358: leaf shaping	4.23E-03
48	GO:0016554: cytidine to uridine editing	4.23E-03
49	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.23E-03
50	GO:0009913: epidermal cell differentiation	4.23E-03
51	GO:1902456: regulation of stomatal opening	4.23E-03
52	GO:0048831: regulation of shoot system development	4.23E-03
53	GO:0003006: developmental process involved in reproduction	4.23E-03
54	GO:0010405: arabinogalactan protein metabolic process	4.23E-03
55	GO:0031930: mitochondria-nucleus signaling pathway	5.09E-03
56	GO:0006694: steroid biosynthetic process	5.09E-03
57	GO:0048509: regulation of meristem development	5.09E-03
58	GO:0030488: tRNA methylation	5.09E-03
59	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	5.09E-03
60	GO:0071554: cell wall organization or biogenesis	5.15E-03
61	GO:0016132: brassinosteroid biosynthetic process	5.15E-03
62	GO:0030497: fatty acid elongation	6.02E-03
63	GO:0048437: floral organ development	6.02E-03
64	GO:0010098: suspensor development	6.02E-03
65	GO:0030307: positive regulation of cell growth	6.02E-03
66	GO:0007275: multicellular organism development	6.27E-03
67	GO:0006355: regulation of transcription, DNA-templated	6.66E-03
68	GO:0009819: drought recovery	7.00E-03
69	GO:0006402: mRNA catabolic process	7.00E-03
70	GO:0010439: regulation of glucosinolate biosynthetic process	7.00E-03
71	GO:0009704: de-etiolation	7.00E-03
72	GO:2000070: regulation of response to water deprivation	7.00E-03
73	GO:0000105: histidine biosynthetic process	7.00E-03
74	GO:0048573: photoperiodism, flowering	8.80E-03
75	GO:0048507: meristem development	9.12E-03
76	GO:0009056: catabolic process	9.12E-03
77	GO:0009416: response to light stimulus	9.54E-03
78	GO:0045892: negative regulation of transcription, DNA-templated	9.69E-03
79	GO:0009638: phototropism	1.03E-02
80	GO:0010018: far-red light signaling pathway	1.03E-02
81	GO:0009299: mRNA transcription	1.14E-02
82	GO:0009641: shade avoidance	1.14E-02
83	GO:0006865: amino acid transport	1.18E-02
84	GO:0009867: jasmonic acid mediated signaling pathway	1.24E-02
85	GO:0009682: induced systemic resistance	1.27E-02
86	GO:0048229: gametophyte development	1.27E-02
87	GO:0006790: sulfur compound metabolic process	1.40E-02
88	GO:0012501: programmed cell death	1.40E-02
89	GO:0005983: starch catabolic process	1.40E-02
90	GO:0010582: floral meristem determinacy	1.40E-02
91	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.40E-02
92	GO:0006631: fatty acid metabolic process	1.48E-02
93	GO:2000012: regulation of auxin polar transport	1.53E-02
94	GO:0010102: lateral root morphogenesis	1.53E-02
95	GO:0009785: blue light signaling pathway	1.53E-02
96	GO:0010628: positive regulation of gene expression	1.53E-02
97	GO:0006006: glucose metabolic process	1.53E-02
98	GO:2000028: regulation of photoperiodism, flowering	1.53E-02
99	GO:0010075: regulation of meristem growth	1.53E-02
100	GO:0009725: response to hormone	1.53E-02
101	GO:0009767: photosynthetic electron transport chain	1.53E-02
102	GO:0048467: gynoecium development	1.66E-02
103	GO:0010223: secondary shoot formation	1.66E-02
104	GO:0009887: animal organ morphogenesis	1.66E-02
105	GO:0009266: response to temperature stimulus	1.66E-02
106	GO:0009934: regulation of meristem structural organization	1.66E-02
107	GO:0042546: cell wall biogenesis	1.67E-02
108	GO:0009636: response to toxic substance	1.80E-02
109	GO:0090351: seedling development	1.81E-02
110	GO:0046854: phosphatidylinositol phosphorylation	1.81E-02
111	GO:0042753: positive regulation of circadian rhythm	1.95E-02
112	GO:0006863: purine nucleobase transport	1.95E-02
113	GO:0080147: root hair cell development	2.10E-02
114	GO:0005992: trehalose biosynthetic process	2.10E-02
115	GO:0006418: tRNA aminoacylation for protein translation	2.25E-02
116	GO:0009793: embryo development ending in seed dormancy	2.28E-02
117	GO:0016114: terpenoid biosynthetic process	2.41E-02
118	GO:0003333: amino acid transmembrane transport	2.41E-02
119	GO:0010431: seed maturation	2.41E-02
120	GO:0007005: mitochondrion organization	2.57E-02
121	GO:0009693: ethylene biosynthetic process	2.73E-02
122	GO:0009686: gibberellin biosynthetic process	2.73E-02
123	GO:0010082: regulation of root meristem growth	2.73E-02
124	GO:0001944: vasculature development	2.73E-02
125	GO:0009625: response to insect	2.73E-02
126	GO:0006284: base-excision repair	2.90E-02
127	GO:0010091: trichome branching	2.90E-02
128	GO:0070417: cellular response to cold	3.07E-02
129	GO:0048653: anther development	3.25E-02
130	GO:0080022: primary root development	3.25E-02
131	GO:0010118: stomatal movement	3.25E-02
132	GO:0009742: brassinosteroid mediated signaling pathway	3.27E-02
133	GO:0006468: protein phosphorylation	3.28E-02
134	GO:0010268: brassinosteroid homeostasis	3.42E-02
135	GO:0009960: endosperm development	3.42E-02
136	GO:0010305: leaf vascular tissue pattern formation	3.42E-02
137	GO:0010182: sugar mediated signaling pathway	3.42E-02
138	GO:0009741: response to brassinosteroid	3.42E-02
139	GO:0009646: response to absence of light	3.61E-02
140	GO:0007018: microtubule-based movement	3.61E-02
141	GO:0048825: cotyledon development	3.79E-02
142	GO:0010583: response to cyclopentenone	4.17E-02
143	GO:0032502: developmental process	4.17E-02
144	GO:0030163: protein catabolic process	4.36E-02
145	GO:1901657: glycosyl compound metabolic process	4.36E-02
146	GO:0016042: lipid catabolic process	4.38E-02
147	GO:0009567: double fertilization forming a zygote and endosperm	4.56E-02
148	GO:0016125: sterol metabolic process	4.56E-02
149	GO:0009639: response to red or far red light	4.56E-02
150	GO:0006464: cellular protein modification process	4.56E-02
151	GO:0051607: defense response to virus	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
4	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
5	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
6	GO:0001872: (1->3)-beta-D-glucan binding	5.22E-05
7	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.92E-04
8	GO:0000829: inositol heptakisphosphate kinase activity	3.92E-04
9	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.92E-04
10	GO:0005227: calcium activated cation channel activity	3.92E-04
11	GO:0004828: serine-tRNA ligase activity	3.92E-04
12	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	3.92E-04
13	GO:0000828: inositol hexakisphosphate kinase activity	3.92E-04
14	GO:0004134: 4-alpha-glucanotransferase activity	3.92E-04
15	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	3.92E-04
16	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.92E-04
17	GO:0010012: steroid 22-alpha hydroxylase activity	3.92E-04
18	GO:0000170: sphingosine hydroxylase activity	3.92E-04
19	GO:0050139: nicotinate-N-glucosyltransferase activity	3.92E-04
20	GO:0052832: inositol monophosphate 3-phosphatase activity	8.49E-04
21	GO:0004817: cysteine-tRNA ligase activity	8.49E-04
22	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	8.49E-04
23	GO:0042284: sphingolipid delta-4 desaturase activity	8.49E-04
24	GO:0008934: inositol monophosphate 1-phosphatase activity	8.49E-04
25	GO:0008493: tetracycline transporter activity	8.49E-04
26	GO:0052833: inositol monophosphate 4-phosphatase activity	8.49E-04
27	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	8.49E-04
28	GO:0050736: O-malonyltransferase activity	8.49E-04
29	GO:0009884: cytokinin receptor activity	8.49E-04
30	GO:0017118: lipoyltransferase activity	8.49E-04
31	GO:0045543: gibberellin 2-beta-dioxygenase activity	8.49E-04
32	GO:0043425: bHLH transcription factor binding	8.49E-04
33	GO:0010296: prenylcysteine methylesterase activity	8.49E-04
34	GO:0005034: osmosensor activity	1.38E-03
35	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.99E-03
36	GO:0005345: purine nucleobase transmembrane transporter activity	2.31E-03
37	GO:0033612: receptor serine/threonine kinase binding	2.54E-03
38	GO:0004871: signal transducer activity	2.62E-03
39	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.67E-03
40	GO:0019199: transmembrane receptor protein kinase activity	2.67E-03
41	GO:0004523: RNA-DNA hybrid ribonuclease activity	3.42E-03
42	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.42E-03
43	GO:0008725: DNA-3-methyladenine glycosylase activity	3.42E-03
44	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.23E-03
45	GO:0004709: MAP kinase kinase kinase activity	4.23E-03
46	GO:0000293: ferric-chelate reductase activity	4.23E-03
47	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	5.09E-03
48	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.09E-03
49	GO:0016832: aldehyde-lyase activity	5.09E-03
50	GO:0019900: kinase binding	5.09E-03
51	GO:0004518: nuclease activity	5.51E-03
52	GO:0000156: phosphorelay response regulator activity	5.87E-03
53	GO:0016413: O-acetyltransferase activity	7.05E-03
54	GO:0008173: RNA methyltransferase activity	8.03E-03
55	GO:0030247: polysaccharide binding	8.80E-03
56	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	9.12E-03
57	GO:0004674: protein serine/threonine kinase activity	1.03E-02
58	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.13E-02
59	GO:0004673: protein histidine kinase activity	1.14E-02
60	GO:0004805: trehalose-phosphatase activity	1.14E-02
61	GO:0009055: electron carrier activity	1.45E-02
62	GO:0003677: DNA binding	1.48E-02
63	GO:0003725: double-stranded RNA binding	1.53E-02
64	GO:0000155: phosphorelay sensor kinase activity	1.53E-02
65	GO:0003723: RNA binding	1.64E-02
66	GO:0042802: identical protein binding	1.67E-02
67	GO:0008146: sulfotransferase activity	1.81E-02
68	GO:0003712: transcription cofactor activity	1.81E-02
69	GO:0004190: aspartic-type endopeptidase activity	1.81E-02
70	GO:0031418: L-ascorbic acid binding	2.10E-02
71	GO:0008289: lipid binding	2.13E-02
72	GO:0016298: lipase activity	2.24E-02
73	GO:0043424: protein histidine kinase binding	2.25E-02
74	GO:0051087: chaperone binding	2.25E-02
75	GO:0003777: microtubule motor activity	2.40E-02
76	GO:0015171: amino acid transmembrane transporter activity	2.40E-02
77	GO:0003964: RNA-directed DNA polymerase activity	2.41E-02
78	GO:0010333: terpene synthase activity	2.41E-02
79	GO:0003727: single-stranded RNA binding	2.90E-02
80	GO:0016874: ligase activity	2.90E-02
81	GO:0004812: aminoacyl-tRNA ligase activity	3.07E-02
82	GO:0015035: protein disulfide oxidoreductase activity	3.17E-02
83	GO:0052689: carboxylic ester hydrolase activity	3.17E-02
84	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	3.42E-02
85	GO:0050662: coenzyme binding	3.61E-02
86	GO:0016301: kinase activity	3.64E-02
87	GO:0042803: protein homodimerization activity	3.71E-02
88	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.96E-02
89	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.98E-02
90	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.38E-02
91	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.56E-02
92	GO:0016759: cellulose synthase activity	4.56E-02
93	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0019897: extrinsic component of plasma membrane	1.38E-03
3	GO:0030139: endocytic vesicle	1.38E-03
4	GO:0032585: multivesicular body membrane	1.99E-03
5	GO:0009654: photosystem II oxygen evolving complex	2.31E-03
6	GO:0009544: chloroplast ATP synthase complex	2.67E-03
7	GO:0019898: extrinsic component of membrane	4.81E-03
8	GO:0009986: cell surface	6.02E-03
9	GO:0009501: amyloplast	7.00E-03
10	GO:0010494: cytoplasmic stress granule	9.12E-03
11	GO:0005886: plasma membrane	1.63E-02
12	GO:0030095: chloroplast photosystem II	1.66E-02
13	GO:0046658: anchored component of plasma membrane	1.76E-02
14	GO:0005875: microtubule associated complex	1.95E-02
15	GO:0005871: kinesin complex	3.07E-02
16	GO:0009504: cell plate	3.79E-02