GO Enrichment Analysis of Co-expressed Genes with
AT4G18520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042352: GDP-L-fucose salvage | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0043007: maintenance of rDNA | 4.60E-05 |
| 4 | GO:0005980: glycogen catabolic process | 4.60E-05 |
| 5 | GO:0006741: NADP biosynthetic process | 1.13E-04 |
| 6 | GO:0071497: cellular response to freezing | 1.13E-04 |
| 7 | GO:0009662: etioplast organization | 1.13E-04 |
| 8 | GO:0090342: regulation of cell aging | 1.13E-04 |
| 9 | GO:0042325: regulation of phosphorylation | 1.13E-04 |
| 10 | GO:0071452: cellular response to singlet oxygen | 1.13E-04 |
| 11 | GO:0016255: attachment of GPI anchor to protein | 1.95E-04 |
| 12 | GO:0016050: vesicle organization | 1.95E-04 |
| 13 | GO:0019674: NAD metabolic process | 1.95E-04 |
| 14 | GO:0019363: pyridine nucleotide biosynthetic process | 2.85E-04 |
| 15 | GO:1902347: response to strigolactone | 3.84E-04 |
| 16 | GO:0006808: regulation of nitrogen utilization | 3.84E-04 |
| 17 | GO:1901141: regulation of lignin biosynthetic process | 3.84E-04 |
| 18 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.84E-04 |
| 19 | GO:0010027: thylakoid membrane organization | 4.15E-04 |
| 20 | GO:0042793: transcription from plastid promoter | 5.98E-04 |
| 21 | GO:0010310: regulation of hydrogen peroxide metabolic process | 7.13E-04 |
| 22 | GO:2000033: regulation of seed dormancy process | 7.13E-04 |
| 23 | GO:0010098: suspensor development | 8.33E-04 |
| 24 | GO:0009642: response to light intensity | 9.57E-04 |
| 25 | GO:0042255: ribosome assembly | 9.57E-04 |
| 26 | GO:0006353: DNA-templated transcription, termination | 9.57E-04 |
| 27 | GO:0006506: GPI anchor biosynthetic process | 9.57E-04 |
| 28 | GO:0010206: photosystem II repair | 1.22E-03 |
| 29 | GO:0005982: starch metabolic process | 1.36E-03 |
| 30 | GO:0045036: protein targeting to chloroplast | 1.51E-03 |
| 31 | GO:0010629: negative regulation of gene expression | 1.51E-03 |
| 32 | GO:0006820: anion transport | 1.81E-03 |
| 33 | GO:0005983: starch catabolic process | 1.81E-03 |
| 34 | GO:0009266: response to temperature stimulus | 2.14E-03 |
| 35 | GO:0010020: chloroplast fission | 2.14E-03 |
| 36 | GO:0090351: seedling development | 2.31E-03 |
| 37 | GO:0080188: RNA-directed DNA methylation | 2.31E-03 |
| 38 | GO:0048278: vesicle docking | 3.04E-03 |
| 39 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.43E-03 |
| 40 | GO:0009658: chloroplast organization | 4.21E-03 |
| 41 | GO:0048544: recognition of pollen | 4.47E-03 |
| 42 | GO:0061025: membrane fusion | 4.47E-03 |
| 43 | GO:0071554: cell wall organization or biogenesis | 4.91E-03 |
| 44 | GO:0009828: plant-type cell wall loosening | 5.60E-03 |
| 45 | GO:0006906: vesicle fusion | 6.82E-03 |
| 46 | GO:0009631: cold acclimation | 8.41E-03 |
| 47 | GO:0006887: exocytosis | 1.01E-02 |
| 48 | GO:0006897: endocytosis | 1.01E-02 |
| 49 | GO:0009664: plant-type cell wall organization | 1.26E-02 |
| 50 | GO:0006857: oligopeptide transport | 1.39E-02 |
| 51 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 52 | GO:0009620: response to fungus | 1.59E-02 |
| 53 | GO:0016310: phosphorylation | 1.66E-02 |
| 54 | GO:0009742: brassinosteroid mediated signaling pathway | 1.77E-02 |
| 55 | GO:0006508: proteolysis | 2.21E-02 |
| 56 | GO:0006633: fatty acid biosynthetic process | 2.34E-02 |
| 57 | GO:0006413: translational initiation | 2.38E-02 |
| 58 | GO:0009451: RNA modification | 2.54E-02 |
| 59 | GO:0008380: RNA splicing | 2.84E-02 |
| 60 | GO:0010468: regulation of gene expression | 2.84E-02 |
| 61 | GO:0009826: unidimensional cell growth | 3.32E-02 |
| 62 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 63 | GO:0006886: intracellular protein transport | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097100: supercoiled DNA binding | 0.00E+00 |
| 2 | GO:0047341: fucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 3 | GO:0051752: phosphoglucan, water dikinase activity | 0.00E+00 |
| 4 | GO:0050201: fucokinase activity | 0.00E+00 |
| 5 | GO:0004645: phosphorylase activity | 4.60E-05 |
| 6 | GO:0042736: NADH kinase activity | 4.60E-05 |
| 7 | GO:0008184: glycogen phosphorylase activity | 4.60E-05 |
| 8 | GO:0019200: carbohydrate kinase activity | 1.13E-04 |
| 9 | GO:0017150: tRNA dihydrouridine synthase activity | 1.95E-04 |
| 10 | GO:0009041: uridylate kinase activity | 2.85E-04 |
| 11 | GO:0004335: galactokinase activity | 3.84E-04 |
| 12 | GO:2001070: starch binding | 5.98E-04 |
| 13 | GO:0003951: NAD+ kinase activity | 1.09E-03 |
| 14 | GO:0019888: protein phosphatase regulator activity | 1.98E-03 |
| 15 | GO:0004176: ATP-dependent peptidase activity | 3.04E-03 |
| 16 | GO:0008408: 3'-5' exonuclease activity | 3.04E-03 |
| 17 | GO:0003727: single-stranded RNA binding | 3.63E-03 |
| 18 | GO:0008168: methyltransferase activity | 4.05E-03 |
| 19 | GO:0004527: exonuclease activity | 4.25E-03 |
| 20 | GO:0008237: metallopeptidase activity | 5.84E-03 |
| 21 | GO:0016413: O-acetyltransferase activity | 6.08E-03 |
| 22 | GO:0008236: serine-type peptidase activity | 7.34E-03 |
| 23 | GO:0004222: metalloendopeptidase activity | 8.14E-03 |
| 24 | GO:0000149: SNARE binding | 9.53E-03 |
| 25 | GO:0042393: histone binding | 9.82E-03 |
| 26 | GO:0005484: SNAP receptor activity | 1.07E-02 |
| 27 | GO:0043621: protein self-association | 1.13E-02 |
| 28 | GO:0005198: structural molecule activity | 1.16E-02 |
| 29 | GO:0003690: double-stranded DNA binding | 1.35E-02 |
| 30 | GO:0016298: lipase activity | 1.35E-02 |
| 31 | GO:0004386: helicase activity | 1.80E-02 |
| 32 | GO:0019843: rRNA binding | 1.99E-02 |
| 33 | GO:0030170: pyridoxal phosphate binding | 2.14E-02 |
| 34 | GO:0004252: serine-type endopeptidase activity | 2.14E-02 |
| 35 | GO:0044212: transcription regulatory region DNA binding | 2.77E-02 |
| 36 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 37 | GO:0042802: identical protein binding | 2.97E-02 |
| 38 | GO:0005524: ATP binding | 3.11E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 40 | GO:0008233: peptidase activity | 3.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042644: chloroplast nucleoid | 2.71E-05 |
| 2 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.13E-04 |
| 3 | GO:0042765: GPI-anchor transamidase complex | 1.95E-04 |
| 4 | GO:0009507: chloroplast | 2.33E-04 |
| 5 | GO:0042646: plastid nucleoid | 2.85E-04 |
| 6 | GO:0009570: chloroplast stroma | 3.01E-04 |
| 7 | GO:0009295: nucleoid | 3.70E-04 |
| 8 | GO:0009534: chloroplast thylakoid | 4.48E-04 |
| 9 | GO:0005655: nucleolar ribonuclease P complex | 7.13E-04 |
| 10 | GO:0000159: protein phosphatase type 2A complex | 1.66E-03 |
| 11 | GO:0009508: plastid chromosome | 1.98E-03 |
| 12 | GO:0009536: plastid | 6.89E-03 |
| 13 | GO:0043231: intracellular membrane-bounded organelle | 8.47E-03 |
| 14 | GO:0031977: thylakoid lumen | 1.01E-02 |
| 15 | GO:0031201: SNARE complex | 1.01E-02 |
| 16 | GO:0009535: chloroplast thylakoid membrane | 1.48E-02 |
| 17 | GO:0012505: endomembrane system | 1.66E-02 |
| 18 | GO:0009706: chloroplast inner membrane | 1.70E-02 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 1.99E-02 |
| 20 | GO:0005623: cell | 2.03E-02 |
| 21 | GO:0005622: intracellular | 2.43E-02 |