Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G17810

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902171: regulation of tocopherol cyclase activity0.00E+00
2GO:1901918: negative regulation of exoribonuclease activity0.00E+00
3GO:0033494: ferulate metabolic process0.00E+00
4GO:0090279: regulation of calcium ion import0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0042820: vitamin B6 catabolic process0.00E+00
7GO:0006480: N-terminal protein amino acid methylation0.00E+00
8GO:0015882: L-ascorbic acid transport0.00E+00
9GO:0046471: phosphatidylglycerol metabolic process0.00E+00
10GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
11GO:0008298: intracellular mRNA localization0.00E+00
12GO:0071474: cellular hyperosmotic response0.00E+00
13GO:0009657: plastid organization8.20E-06
14GO:0010207: photosystem II assembly4.92E-05
15GO:0009854: oxidative photosynthetic carbon pathway1.49E-04
16GO:0000476: maturation of 4.5S rRNA2.63E-04
17GO:0009443: pyridoxal 5'-phosphate salvage2.63E-04
18GO:0000967: rRNA 5'-end processing2.63E-04
19GO:0046467: membrane lipid biosynthetic process2.63E-04
20GO:0031426: polycistronic mRNA processing2.63E-04
21GO:0006637: acyl-CoA metabolic process2.63E-04
22GO:0043953: protein transport by the Tat complex2.63E-04
23GO:0015671: oxygen transport2.63E-04
24GO:0051775: response to redox state2.63E-04
25GO:0071277: cellular response to calcium ion2.63E-04
26GO:0000481: maturation of 5S rRNA2.63E-04
27GO:0042371: vitamin K biosynthetic process2.63E-04
28GO:0065002: intracellular protein transmembrane transport2.63E-04
29GO:0071461: cellular response to redox state2.63E-04
30GO:0010028: xanthophyll cycle2.63E-04
31GO:0034337: RNA folding2.63E-04
32GO:0009791: post-embryonic development2.75E-04
33GO:0019252: starch biosynthetic process2.75E-04
34GO:0071482: cellular response to light stimulus3.06E-04
35GO:0009658: chloroplast organization4.23E-04
36GO:0005982: starch metabolic process4.38E-04
37GO:0051262: protein tetramerization5.78E-04
38GO:0034470: ncRNA processing5.78E-04
39GO:0051645: Golgi localization5.78E-04
40GO:0080005: photosystem stoichiometry adjustment5.78E-04
41GO:0010541: acropetal auxin transport5.78E-04
42GO:0034755: iron ion transmembrane transport5.78E-04
43GO:0060151: peroxisome localization5.78E-04
44GO:0000256: allantoin catabolic process5.78E-04
45GO:0071457: cellular response to ozone5.78E-04
46GO:0015995: chlorophyll biosynthetic process6.03E-04
47GO:0009767: photosynthetic electron transport chain7.67E-04
48GO:0010218: response to far red light7.76E-04
49GO:0048467: gynoecium development8.62E-04
50GO:0010020: chloroplast fission8.62E-04
51GO:0009637: response to blue light9.22E-04
52GO:0090391: granum assembly9.39E-04
53GO:0010136: ureide catabolic process9.39E-04
54GO:0051646: mitochondrion localization9.39E-04
55GO:0010160: formation of animal organ boundary9.39E-04
56GO:0090436: leaf pavement cell development9.39E-04
57GO:0015940: pantothenate biosynthetic process9.39E-04
58GO:0005977: glycogen metabolic process9.39E-04
59GO:0006636: unsaturated fatty acid biosynthetic process1.07E-03
60GO:0009768: photosynthesis, light harvesting in photosystem I1.30E-03
61GO:0009152: purine ribonucleotide biosynthetic process1.34E-03
62GO:0046653: tetrahydrofolate metabolic process1.34E-03
63GO:0006107: oxaloacetate metabolic process1.34E-03
64GO:0010239: chloroplast mRNA processing1.34E-03
65GO:0009052: pentose-phosphate shunt, non-oxidative branch1.34E-03
66GO:0043481: anthocyanin accumulation in tissues in response to UV light1.34E-03
67GO:0006145: purine nucleobase catabolic process1.34E-03
68GO:0010731: protein glutathionylation1.34E-03
69GO:0071786: endoplasmic reticulum tubular network organization1.34E-03
70GO:2001141: regulation of RNA biosynthetic process1.34E-03
71GO:0071484: cellular response to light intensity1.34E-03
72GO:0015689: molybdate ion transport1.79E-03
73GO:0009765: photosynthesis, light harvesting1.79E-03
74GO:2000122: negative regulation of stomatal complex development1.79E-03
75GO:0006021: inositol biosynthetic process1.79E-03
76GO:0006734: NADH metabolic process1.79E-03
77GO:0010021: amylopectin biosynthetic process1.79E-03
78GO:0010037: response to carbon dioxide1.79E-03
79GO:0015976: carbon utilization1.79E-03
80GO:0071486: cellular response to high light intensity1.79E-03
81GO:0006465: signal peptide processing2.29E-03
82GO:0071493: cellular response to UV-B2.29E-03
83GO:0006564: L-serine biosynthetic process2.29E-03
84GO:0043097: pyrimidine nucleoside salvage2.29E-03
85GO:0000278: mitotic cell cycle2.29E-03
86GO:0009958: positive gravitropism2.32E-03
87GO:0005975: carbohydrate metabolic process2.59E-03
88GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.82E-03
89GO:0060918: auxin transport2.82E-03
90GO:0010190: cytochrome b6f complex assembly2.82E-03
91GO:0006206: pyrimidine nucleobase metabolic process2.82E-03
92GO:0009228: thiamine biosynthetic process2.82E-03
93GO:0046855: inositol phosphate dephosphorylation2.82E-03
94GO:0050665: hydrogen peroxide biosynthetic process2.82E-03
95GO:0042549: photosystem II stabilization2.82E-03
96GO:0071333: cellular response to glucose stimulus3.40E-03
97GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity3.40E-03
98GO:0010019: chloroplast-nucleus signaling pathway3.40E-03
99GO:0015979: photosynthesis3.57E-03
100GO:1900056: negative regulation of leaf senescence4.00E-03
101GO:0009645: response to low light intensity stimulus4.00E-03
102GO:0009769: photosynthesis, light harvesting in photosystem II4.00E-03
103GO:0009058: biosynthetic process4.10E-03
104GO:0010078: maintenance of root meristem identity4.65E-03
105GO:0070413: trehalose metabolism in response to stress4.65E-03
106GO:0009704: de-etiolation4.65E-03
107GO:0032508: DNA duplex unwinding4.65E-03
108GO:0050821: protein stabilization4.65E-03
109GO:0052543: callose deposition in cell wall4.65E-03
110GO:0016559: peroxisome fission4.65E-03
111GO:0055114: oxidation-reduction process4.97E-03
112GO:0019430: removal of superoxide radicals5.32E-03
113GO:0010204: defense response signaling pathway, resistance gene-independent5.32E-03
114GO:0043562: cellular response to nitrogen levels5.32E-03
115GO:0017004: cytochrome complex assembly5.32E-03
116GO:0018298: protein-chromophore linkage5.39E-03
117GO:0006811: ion transport5.95E-03
118GO:0098656: anion transmembrane transport6.03E-03
119GO:0009821: alkaloid biosynthetic process6.03E-03
120GO:0006098: pentose-phosphate shunt6.03E-03
121GO:0090333: regulation of stomatal closure6.03E-03
122GO:0019432: triglyceride biosynthetic process6.03E-03
123GO:0048507: meristem development6.03E-03
124GO:0048527: lateral root development6.23E-03
125GO:0010380: regulation of chlorophyll biosynthetic process6.77E-03
126GO:0007346: regulation of mitotic cell cycle6.77E-03
127GO:0009853: photorespiration6.83E-03
128GO:0006810: transport7.49E-03
129GO:0019684: photosynthesis, light reaction8.35E-03
130GO:0009089: lysine biosynthetic process via diaminopimelate8.35E-03
131GO:0043085: positive regulation of catalytic activity8.35E-03
132GO:0006879: cellular iron ion homeostasis8.35E-03
133GO:0006352: DNA-templated transcription, initiation8.35E-03
134GO:0018119: peptidyl-cysteine S-nitrosylation8.35E-03
135GO:0009684: indoleacetic acid biosynthetic process8.35E-03
136GO:0010114: response to red light8.82E-03
137GO:0008361: regulation of cell size9.17E-03
138GO:0006790: sulfur compound metabolic process9.17E-03
139GO:0010588: cotyledon vascular tissue pattern formation1.00E-02
140GO:0030048: actin filament-based movement1.00E-02
141GO:0006108: malate metabolic process1.00E-02
142GO:0006094: gluconeogenesis1.00E-02
143GO:0010143: cutin biosynthetic process1.09E-02
144GO:0019253: reductive pentose-phosphate cycle1.09E-02
145GO:0010540: basipetal auxin transport1.09E-02
146GO:0019853: L-ascorbic acid biosynthetic process1.18E-02
147GO:0046854: phosphatidylinositol phosphorylation1.18E-02
148GO:0042023: DNA endoreduplication1.28E-02
149GO:0009833: plant-type primary cell wall biogenesis1.28E-02
150GO:0080167: response to karrikin1.33E-02
151GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.38E-02
152GO:0005992: trehalose biosynthetic process1.38E-02
153GO:0019915: lipid storage1.58E-02
154GO:0009269: response to desiccation1.58E-02
155GO:0016114: terpenoid biosynthetic process1.58E-02
156GO:0003333: amino acid transmembrane transport1.58E-02
157GO:0030433: ubiquitin-dependent ERAD pathway1.68E-02
158GO:0019748: secondary metabolic process1.68E-02
159GO:0071215: cellular response to abscisic acid stimulus1.79E-02
160GO:0006817: phosphate ion transport1.90E-02
161GO:0048443: stamen development1.90E-02
162GO:0009306: protein secretion1.90E-02
163GO:0016310: phosphorylation2.01E-02
164GO:0042631: cellular response to water deprivation2.13E-02
165GO:0080022: primary root development2.13E-02
166GO:0010087: phloem or xylem histogenesis2.13E-02
167GO:0006520: cellular amino acid metabolic process2.24E-02
168GO:0071472: cellular response to salt stress2.24E-02
169GO:0010154: fruit development2.24E-02
170GO:0007059: chromosome segregation2.36E-02
171GO:0048825: cotyledon development2.48E-02
172GO:0009851: auxin biosynthetic process2.48E-02
173GO:0007264: small GTPase mediated signal transduction2.73E-02
174GO:0032502: developmental process2.73E-02
175GO:0006413: translational initiation2.74E-02
176GO:0010090: trichome morphogenesis2.86E-02
177GO:1901657: glycosyl compound metabolic process2.86E-02
178GO:0009567: double fertilization forming a zygote and endosperm2.99E-02
179GO:0009639: response to red or far red light2.99E-02
180GO:0010027: thylakoid membrane organization3.39E-02
181GO:0042128: nitrate assimilation3.66E-02
182GO:0009627: systemic acquired resistance3.66E-02
183GO:0006950: response to stress3.80E-02
184GO:0016311: dephosphorylation3.95E-02
185GO:0016049: cell growth3.95E-02
186GO:0009735: response to cytokinin3.96E-02
187GO:0030244: cellulose biosynthetic process4.09E-02
188GO:0009910: negative regulation of flower development4.53E-02
189GO:0010119: regulation of stomatal movement4.53E-02
190GO:0009631: cold acclimation4.53E-02
191GO:0006970: response to osmotic stress4.88E-02
192GO:0051301: cell division4.91E-02
193GO:0034599: cellular response to oxidative stress4.99E-02
194GO:0006099: tricarboxylic acid cycle4.99E-02
RankGO TermAdjusted P value
1GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
2GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
3GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
4GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
5GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
6GO:0008974: phosphoribulokinase activity0.00E+00
7GO:0015229: L-ascorbic acid transporter activity0.00E+00
8GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
9GO:0008465: glycerate dehydrogenase activity0.00E+00
10GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
11GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
12GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
13GO:0009011: starch synthase activity2.99E-07
14GO:0046906: tetrapyrrole binding2.63E-04
15GO:0005227: calcium activated cation channel activity2.63E-04
16GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity2.63E-04
17GO:0008746: NAD(P)+ transhydrogenase activity2.63E-04
18GO:0004328: formamidase activity2.63E-04
19GO:0010347: L-galactose-1-phosphate phosphatase activity2.63E-04
20GO:0005344: oxygen transporter activity2.63E-04
21GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity5.78E-04
22GO:0052832: inositol monophosphate 3-phosphatase activity5.78E-04
23GO:0033201: alpha-1,4-glucan synthase activity5.78E-04
24GO:0004312: fatty acid synthase activity5.78E-04
25GO:0080097: L-tryptophan:pyruvate aminotransferase activity5.78E-04
26GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity5.78E-04
27GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity5.78E-04
28GO:0008934: inositol monophosphate 1-phosphatase activity5.78E-04
29GO:0052833: inositol monophosphate 4-phosphatase activity5.78E-04
30GO:0019156: isoamylase activity5.78E-04
31GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase5.78E-04
32GO:0004103: choline kinase activity5.78E-04
33GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity5.78E-04
34GO:0009977: proton motive force dependent protein transmembrane transporter activity5.78E-04
35GO:0004617: phosphoglycerate dehydrogenase activity5.78E-04
36GO:0016491: oxidoreductase activity5.80E-04
37GO:0004565: beta-galactosidase activity7.67E-04
38GO:0005315: inorganic phosphate transmembrane transporter activity7.67E-04
39GO:0004373: glycogen (starch) synthase activity9.39E-04
40GO:0050734: hydroxycinnamoyltransferase activity9.39E-04
41GO:0004848: ureidoglycolate hydrolase activity9.39E-04
42GO:0004751: ribose-5-phosphate isomerase activity9.39E-04
43GO:0016742: hydroxymethyl-, formyl- and related transferase activity9.39E-04
44GO:0070402: NADPH binding9.39E-04
45GO:0008864: formyltetrahydrofolate deformylase activity9.39E-04
46GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity9.39E-04
47GO:0031409: pigment binding1.07E-03
48GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.34E-03
49GO:0048027: mRNA 5'-UTR binding1.34E-03
50GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.34E-03
51GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.34E-03
52GO:0016851: magnesium chelatase activity1.34E-03
53GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.34E-03
54GO:0001872: (1->3)-beta-D-glucan binding1.34E-03
55GO:0004045: aminoacyl-tRNA hydrolase activity1.79E-03
56GO:0080032: methyl jasmonate esterase activity1.79E-03
57GO:0016987: sigma factor activity1.79E-03
58GO:0015098: molybdate ion transmembrane transporter activity1.79E-03
59GO:0008891: glycolate oxidase activity1.79E-03
60GO:0001053: plastid sigma factor activity1.79E-03
61GO:0016788: hydrolase activity, acting on ester bonds2.17E-03
62GO:0016846: carbon-sulfur lyase activity2.29E-03
63GO:0004332: fructose-bisphosphate aldolase activity2.82E-03
64GO:0004556: alpha-amylase activity2.82E-03
65GO:0000293: ferric-chelate reductase activity2.82E-03
66GO:0004784: superoxide dismutase activity2.82E-03
67GO:0016615: malate dehydrogenase activity2.82E-03
68GO:2001070: starch binding2.82E-03
69GO:0080030: methyl indole-3-acetate esterase activity2.82E-03
70GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity3.40E-03
71GO:0004849: uridine kinase activity3.40E-03
72GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.40E-03
73GO:0030060: L-malate dehydrogenase activity3.40E-03
74GO:0005261: cation channel activity3.40E-03
75GO:0019899: enzyme binding4.00E-03
76GO:0016168: chlorophyll binding4.37E-03
77GO:0004033: aldo-keto reductase (NADP) activity4.65E-03
78GO:0008135: translation factor activity, RNA binding5.32E-03
79GO:0005381: iron ion transmembrane transporter activity6.77E-03
80GO:0015174: basic amino acid transmembrane transporter activity6.77E-03
81GO:0047617: acyl-CoA hydrolase activity6.77E-03
82GO:0016844: strictosidine synthase activity6.77E-03
83GO:0003993: acid phosphatase activity7.15E-03
84GO:0042802: identical protein binding7.85E-03
85GO:0004185: serine-type carboxypeptidase activity8.82E-03
86GO:0010329: auxin efflux transmembrane transporter activity1.00E-02
87GO:0004022: alcohol dehydrogenase (NAD) activity1.00E-02
88GO:0004089: carbonate dehydratase activity1.00E-02
89GO:0051287: NAD binding1.07E-02
90GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.09E-02
91GO:0008266: poly(U) RNA binding1.09E-02
92GO:0003774: motor activity1.09E-02
93GO:0043130: ubiquitin binding1.38E-02
94GO:0005528: FK506 binding1.38E-02
95GO:0005216: ion channel activity1.48E-02
96GO:0016760: cellulose synthase (UDP-forming) activity1.79E-02
97GO:0003727: single-stranded RNA binding1.90E-02
98GO:0008514: organic anion transmembrane transporter activity1.90E-02
99GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.91E-02
100GO:0010181: FMN binding2.36E-02
101GO:0019901: protein kinase binding2.48E-02
102GO:0048038: quinone binding2.61E-02
103GO:0016791: phosphatase activity2.99E-02
104GO:0016759: cellulose synthase activity2.99E-02
105GO:0008237: metallopeptidase activity3.12E-02
106GO:0016597: amino acid binding3.25E-02
107GO:0102483: scopolin beta-glucosidase activity3.80E-02
108GO:0030247: polysaccharide binding3.80E-02
109GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.95E-02
110GO:0005215: transporter activity4.15E-02
111GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.38E-02
112GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.53E-02
113GO:0003746: translation elongation factor activity4.84E-02
114GO:0000987: core promoter proximal region sequence-specific DNA binding4.99E-02
RankGO TermAdjusted P value
1GO:0043235: receptor complex0.00E+00
2GO:0009507: chloroplast1.30E-24
3GO:0009570: chloroplast stroma5.55E-09
4GO:0009535: chloroplast thylakoid membrane3.67E-08
5GO:0009941: chloroplast envelope1.11E-07
6GO:0033281: TAT protein transport complex1.15E-05
7GO:0009543: chloroplast thylakoid lumen9.43E-05
8GO:0009522: photosystem I2.50E-04
9GO:0031361: integral component of thylakoid membrane2.63E-04
10GO:0005787: signal peptidase complex2.63E-04
11GO:0009344: nitrite reductase complex [NAD(P)H]2.63E-04
12GO:0009523: photosystem II2.75E-04
13GO:0009579: thylakoid3.18E-04
14GO:0009534: chloroplast thylakoid3.26E-04
15GO:0005773: vacuole3.53E-04
16GO:0043036: starch grain5.78E-04
17GO:0010287: plastoglobule6.16E-04
18GO:0031969: chloroplast membrane6.24E-04
19GO:0010007: magnesium chelatase complex9.39E-04
20GO:0030076: light-harvesting complex9.62E-04
21GO:0031977: thylakoid lumen1.14E-03
22GO:0030658: transport vesicle membrane1.34E-03
23GO:0071782: endoplasmic reticulum tubular network1.34E-03
24GO:0009526: plastid envelope1.79E-03
25GO:0009517: PSII associated light-harvesting complex II1.79E-03
26GO:0048046: apoplast2.42E-03
27GO:0005777: peroxisome4.30E-03
28GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane4.65E-03
29GO:0009501: amyloplast4.65E-03
30GO:0000307: cyclin-dependent protein kinase holoenzyme complex5.32E-03
31GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)6.03E-03
32GO:0042644: chloroplast nucleoid6.03E-03
33GO:0016459: myosin complex7.54E-03
34GO:0005765: lysosomal membrane8.35E-03
35GO:0032040: small-subunit processome9.17E-03
36GO:0016021: integral component of membrane9.64E-03
37GO:0030095: chloroplast photosystem II1.09E-02
38GO:0009654: photosystem II oxygen evolving complex1.48E-02
39GO:0009706: chloroplast inner membrane1.70E-02
40GO:0019898: extrinsic component of membrane2.48E-02
41GO:0010319: stromule3.12E-02
42GO:0030529: intracellular ribonucleoprotein complex3.39E-02
43GO:0005886: plasma membrane3.88E-02
44GO:0019005: SCF ubiquitin ligase complex4.09E-02
45GO:0009707: chloroplast outer membrane4.09E-02
<
Gene type



Gene DE type