co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0010055: atrichoblast differentiation	0.00E+00
3	GO:0006216: cytidine catabolic process	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
6	GO:0018063: cytochrome c-heme linkage	0.00E+00
7	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
8	GO:0009617: response to bacterium	1.42E-05
9	GO:0051607: defense response to virus	1.91E-05
10	GO:0000162: tryptophan biosynthetic process	4.33E-05
11	GO:0009407: toxin catabolic process	4.43E-05
12	GO:0042742: defense response to bacterium	1.20E-04
13	GO:1900057: positive regulation of leaf senescence	1.40E-04
14	GO:0032107: regulation of response to nutrient levels	2.11E-04
15	GO:0010230: alternative respiration	2.11E-04
16	GO:0006680: glucosylceramide catabolic process	2.11E-04
17	GO:1900384: regulation of flavonol biosynthetic process	2.11E-04
18	GO:0010112: regulation of systemic acquired resistance	2.70E-04
19	GO:0009627: systemic acquired resistance	3.77E-04
20	GO:0050684: regulation of mRNA processing	4.71E-04
21	GO:0019632: shikimate metabolic process	4.71E-04
22	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.71E-04
23	GO:0051252: regulation of RNA metabolic process	4.71E-04
24	GO:0010102: lateral root morphogenesis	5.67E-04
25	GO:0050832: defense response to fungus	6.26E-04
26	GO:0071398: cellular response to fatty acid	7.67E-04
27	GO:0072661: protein targeting to plasma membrane	7.67E-04
28	GO:0010366: negative regulation of ethylene biosynthetic process	7.67E-04
29	GO:0010476: gibberellin mediated signaling pathway	7.67E-04
30	GO:0010325: raffinose family oligosaccharide biosynthetic process	7.67E-04
31	GO:0010272: response to silver ion	7.67E-04
32	GO:0002230: positive regulation of defense response to virus by host	7.67E-04
33	GO:0032784: regulation of DNA-templated transcription, elongation	7.67E-04
34	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.67E-04
35	GO:0009636: response to toxic substance	9.90E-04
36	GO:0016998: cell wall macromolecule catabolic process	1.05E-03
37	GO:0070301: cellular response to hydrogen peroxide	1.09E-03
38	GO:1902290: positive regulation of defense response to oomycetes	1.09E-03
39	GO:0001676: long-chain fatty acid metabolic process	1.09E-03
40	GO:0071456: cellular response to hypoxia	1.15E-03
41	GO:0006012: galactose metabolic process	1.25E-03
42	GO:0045227: capsule polysaccharide biosynthetic process	1.45E-03
43	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.45E-03
44	GO:0048830: adventitious root development	1.45E-03
45	GO:0033358: UDP-L-arabinose biosynthetic process	1.45E-03
46	GO:0010600: regulation of auxin biosynthetic process	1.45E-03
47	GO:1901002: positive regulation of response to salt stress	1.45E-03
48	GO:0010188: response to microbial phytotoxin	1.45E-03
49	GO:0009620: response to fungus	1.72E-03
50	GO:0046283: anthocyanin-containing compound metabolic process	1.85E-03
51	GO:0006564: L-serine biosynthetic process	1.85E-03
52	GO:0031365: N-terminal protein amino acid modification	1.85E-03
53	GO:0009611: response to wounding	2.01E-03
54	GO:0010193: response to ozone	2.10E-03
55	GO:0010256: endomembrane system organization	2.28E-03
56	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.28E-03
57	GO:0002238: response to molecule of fungal origin	2.28E-03
58	GO:0009972: cytidine deamination	2.28E-03
59	GO:0009759: indole glucosinolate biosynthetic process	2.28E-03
60	GO:0048444: floral organ morphogenesis	2.74E-03
61	GO:0009423: chorismate biosynthetic process	2.74E-03
62	GO:0009615: response to virus	3.03E-03
63	GO:0009751: response to salicylic acid	3.20E-03
64	GO:0050829: defense response to Gram-negative bacterium	3.23E-03
65	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.23E-03
66	GO:0006102: isocitrate metabolic process	3.74E-03
67	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.74E-03
68	GO:0009819: drought recovery	3.74E-03
69	GO:0043068: positive regulation of programmed cell death	3.74E-03
70	GO:0008152: metabolic process	3.79E-03
71	GO:0010150: leaf senescence	3.87E-03
72	GO:0010311: lateral root formation	4.14E-03
73	GO:0017004: cytochrome complex assembly	4.29E-03
74	GO:0010204: defense response signaling pathway, resistance gene-independent	4.29E-03
75	GO:0009056: catabolic process	4.85E-03
76	GO:0009835: fruit ripening	4.85E-03
77	GO:0046685: response to arsenic-containing substance	4.85E-03
78	GO:0051865: protein autoubiquitination	4.85E-03
79	GO:0006099: tricarboxylic acid cycle	5.21E-03
80	GO:1900426: positive regulation of defense response to bacterium	5.44E-03
81	GO:0006631: fatty acid metabolic process	5.93E-03
82	GO:0009641: shade avoidance	6.06E-03
83	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.06E-03
84	GO:0006032: chitin catabolic process	6.06E-03
85	GO:0042542: response to hydrogen peroxide	6.17E-03
86	GO:0051707: response to other organism	6.43E-03
87	GO:0009684: indoleacetic acid biosynthetic process	6.69E-03
88	GO:0009682: induced systemic resistance	6.69E-03
89	GO:0052544: defense response by callose deposition in cell wall	6.69E-03
90	GO:0009073: aromatic amino acid family biosynthetic process	6.69E-03
91	GO:0000272: polysaccharide catabolic process	6.69E-03
92	GO:0006979: response to oxidative stress	6.75E-03
93	GO:0071365: cellular response to auxin stimulus	7.36E-03
94	GO:0012501: programmed cell death	7.36E-03
95	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.36E-03
96	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	8.04E-03
97	GO:0006952: defense response	8.24E-03
98	GO:0002237: response to molecule of bacterial origin	8.75E-03
99	GO:0009225: nucleotide-sugar metabolic process	9.48E-03
100	GO:0080147: root hair cell development	1.10E-02
101	GO:0010073: meristem maintenance	1.18E-02
102	GO:0051302: regulation of cell division	1.18E-02
103	GO:0006874: cellular calcium ion homeostasis	1.18E-02
104	GO:0043622: cortical microtubule organization	1.18E-02
105	GO:0030433: ubiquitin-dependent ERAD pathway	1.34E-02
106	GO:0010227: floral organ abscission	1.43E-02
107	GO:0009693: ethylene biosynthetic process	1.43E-02
108	GO:0006629: lipid metabolic process	1.46E-02
109	GO:0042147: retrograde transport, endosome to Golgi	1.61E-02
110	GO:0042391: regulation of membrane potential	1.70E-02
111	GO:0006468: protein phosphorylation	1.77E-02
112	GO:0006520: cellular amino acid metabolic process	1.79E-02
113	GO:0006662: glycerol ether metabolic process	1.79E-02
114	GO:0006814: sodium ion transport	1.88E-02
115	GO:0048544: recognition of pollen	1.88E-02
116	GO:0009851: auxin biosynthetic process	1.98E-02
117	GO:0006623: protein targeting to vacuole	1.98E-02
118	GO:0000302: response to reactive oxygen species	2.08E-02
119	GO:0006891: intra-Golgi vesicle-mediated transport	2.08E-02
120	GO:0045490: pectin catabolic process	2.14E-02
121	GO:0055114: oxidation-reduction process	2.72E-02
122	GO:0009816: defense response to bacterium, incompatible interaction	2.81E-02
123	GO:0006906: vesicle fusion	2.92E-02
124	GO:0006974: cellular response to DNA damage stimulus	2.92E-02
125	GO:0015031: protein transport	3.21E-02
126	GO:0009817: defense response to fungus, incompatible interaction	3.27E-02
127	GO:0006970: response to osmotic stress	3.57E-02
128	GO:0010043: response to zinc ion	3.62E-02
129	GO:0007568: aging	3.62E-02
130	GO:0048527: lateral root development	3.62E-02
131	GO:0034599: cellular response to oxidative stress	3.99E-02
132	GO:0010200: response to chitin	4.24E-02
133	GO:0046686: response to cadmium ion	4.30E-02
134	GO:0016192: vesicle-mediated transport	4.32E-02
135	GO:0006887: exocytosis	4.37E-02
136	GO:0010114: response to red light	4.63E-02
137	GO:0000209: protein polyubiquitination	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0047844: deoxycytidine deaminase activity	0.00E+00
4	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
5	GO:0004364: glutathione transferase activity	8.64E-05
6	GO:0102391: decanoate--CoA ligase activity	1.06E-04
7	GO:0043295: glutathione binding	1.40E-04
8	GO:0004467: long-chain fatty acid-CoA ligase activity	1.40E-04
9	GO:0010179: IAA-Ala conjugate hydrolase activity	2.11E-04
10	GO:2001227: quercitrin binding	2.11E-04
11	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.11E-04
12	GO:0051669: fructan beta-fructosidase activity	2.11E-04
13	GO:0004348: glucosylceramidase activity	2.11E-04
14	GO:0031219: levanase activity	2.11E-04
15	GO:2001147: camalexin binding	2.11E-04
16	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.11E-04
17	GO:0004649: poly(ADP-ribose) glycohydrolase activity	2.11E-04
18	GO:0004806: triglyceride lipase activity	4.04E-04
19	GO:0010331: gibberellin binding	4.71E-04
20	GO:0004617: phosphoglycerate dehydrogenase activity	4.71E-04
21	GO:0008428: ribonuclease inhibitor activity	4.71E-04
22	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	4.71E-04
23	GO:0004049: anthranilate synthase activity	7.67E-04
24	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	7.67E-04
25	GO:0043169: cation binding	7.67E-04
26	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	7.67E-04
27	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.09E-03
28	GO:0005432: calcium:sodium antiporter activity	1.09E-03
29	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.09E-03
30	GO:0050373: UDP-arabinose 4-epimerase activity	1.45E-03
31	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.45E-03
32	GO:0008948: oxaloacetate decarboxylase activity	1.85E-03
33	GO:0018685: alkane 1-monooxygenase activity	1.85E-03
34	GO:0008200: ion channel inhibitor activity	2.28E-03
35	GO:0008237: metallopeptidase activity	2.70E-03
36	GO:0004126: cytidine deaminase activity	2.74E-03
37	GO:0003978: UDP-glucose 4-epimerase activity	2.74E-03
38	GO:0004656: procollagen-proline 4-dioxygenase activity	2.74E-03
39	GO:0008235: metalloexopeptidase activity	3.23E-03
40	GO:0008320: protein transmembrane transporter activity	3.23E-03
41	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.74E-03
42	GO:0004034: aldose 1-epimerase activity	3.74E-03
43	GO:0015491: cation:cation antiporter activity	3.74E-03
44	GO:0016301: kinase activity	4.70E-03
45	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.85E-03
46	GO:0050661: NADP binding	5.68E-03
47	GO:0004568: chitinase activity	6.06E-03
48	GO:0004674: protein serine/threonine kinase activity	6.24E-03
49	GO:0004177: aminopeptidase activity	6.69E-03
50	GO:0031072: heat shock protein binding	8.04E-03
51	GO:0031624: ubiquitin conjugating enzyme binding	8.75E-03
52	GO:0030552: cAMP binding	9.48E-03
53	GO:0004867: serine-type endopeptidase inhibitor activity	9.48E-03
54	GO:0030553: cGMP binding	9.48E-03
55	GO:0005217: intracellular ligand-gated ion channel activity	9.48E-03
56	GO:0008061: chitin binding	9.48E-03
57	GO:0004970: ionotropic glutamate receptor activity	9.48E-03
58	GO:0031418: L-ascorbic acid binding	1.10E-02
59	GO:0001046: core promoter sequence-specific DNA binding	1.10E-02
60	GO:0004871: signal transducer activity	1.18E-02
61	GO:0005216: ion channel activity	1.18E-02
62	GO:0015035: protein disulfide oxidoreductase activity	1.27E-02
63	GO:0016746: transferase activity, transferring acyl groups	1.27E-02
64	GO:0005507: copper ion binding	1.33E-02
65	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.52E-02
66	GO:0003727: single-stranded RNA binding	1.52E-02
67	GO:0047134: protein-disulfide reductase activity	1.61E-02
68	GO:0005249: voltage-gated potassium channel activity	1.70E-02
69	GO:0030551: cyclic nucleotide binding	1.70E-02
70	GO:0001085: RNA polymerase II transcription factor binding	1.79E-02
71	GO:0004791: thioredoxin-disulfide reductase activity	1.88E-02
72	GO:0016853: isomerase activity	1.88E-02
73	GO:0010181: FMN binding	1.88E-02
74	GO:0005509: calcium ion binding	2.00E-02
75	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.28E-02
76	GO:0008194: UDP-glycosyltransferase activity	2.40E-02
77	GO:0008483: transaminase activity	2.49E-02
78	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.49E-02
79	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.49E-02
80	GO:0016597: amino acid binding	2.59E-02
81	GO:0004683: calmodulin-dependent protein kinase activity	3.04E-02
82	GO:0030247: polysaccharide binding	3.04E-02
83	GO:0004601: peroxidase activity	3.32E-02
84	GO:0005096: GTPase activator activity	3.38E-02
85	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.62E-02
86	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.86E-02
87	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.11E-02
88	GO:0000149: SNARE binding	4.11E-02
89	GO:0061630: ubiquitin protein ligase activity	4.32E-02
90	GO:0030246: carbohydrate binding	4.32E-02
91	GO:0020037: heme binding	4.38E-02
92	GO:0005484: SNAP receptor activity	4.63E-02
93	GO:0005516: calmodulin binding	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	1.78E-04
2	GO:0045252: oxoglutarate dehydrogenase complex	2.11E-04
3	GO:0005886: plasma membrane	2.54E-04
4	GO:0005950: anthranilate synthase complex	4.71E-04
5	GO:0030658: transport vesicle membrane	1.09E-03
6	GO:0005788: endoplasmic reticulum lumen	3.20E-03
7	GO:0031901: early endosome membrane	4.85E-03
8	GO:0005768: endosome	5.54E-03
9	GO:0017119: Golgi transport complex	6.06E-03
10	GO:0016021: integral component of membrane	7.77E-03
11	GO:0048046: apoplast	8.58E-03
12	GO:0009505: plant-type cell wall	9.86E-03
13	GO:0005789: endoplasmic reticulum membrane	1.39E-02
14	GO:0005783: endoplasmic reticulum	1.40E-02
15	GO:0005802: trans-Golgi network	1.59E-02
16	GO:0019898: extrinsic component of membrane	1.98E-02
17	GO:0009504: cell plate	1.98E-02
18	GO:0031965: nuclear membrane	1.98E-02
19	GO:0009705: plant-type vacuole membrane	2.14E-02
20	GO:0071944: cell periphery	2.28E-02
21	GO:0032580: Golgi cisterna membrane	2.38E-02
22	GO:0005618: cell wall	2.72E-02
23	GO:0046658: anchored component of plasma membrane	2.84E-02
24	GO:0005667: transcription factor complex	2.92E-02
25	GO:0000151: ubiquitin ligase complex	3.27E-02
26	GO:0005737: cytoplasm	4.14E-02
27	GO:0031201: SNARE complex	4.37E-02
28	GO:0005576: extracellular region	4.39E-02