co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046486: glycerolipid metabolic process	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0044154: histone H3-K14 acetylation	0.00E+00
4	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
5	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
6	GO:0045176: apical protein localization	0.00E+00
7	GO:0000372: Group I intron splicing	0.00E+00
8	GO:0043972: histone H3-K23 acetylation	0.00E+00
9	GO:0080127: fruit septum development	0.00E+00
10	GO:0006664: glycolipid metabolic process	0.00E+00
11	GO:0000373: Group II intron splicing	6.40E-05
12	GO:0009451: RNA modification	3.06E-04
13	GO:0005992: trehalose biosynthetic process	3.69E-04
14	GO:0043087: regulation of GTPase activity	5.40E-04
15	GO:0000066: mitochondrial ornithine transport	5.40E-04
16	GO:0050801: ion homeostasis	5.40E-04
17	GO:0034757: negative regulation of iron ion transport	5.40E-04
18	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	5.40E-04
19	GO:0043971: histone H3-K18 acetylation	5.40E-04
20	GO:0019478: D-amino acid catabolic process	5.40E-04
21	GO:0009958: positive gravitropism	9.01E-04
22	GO:0001736: establishment of planar polarity	1.16E-03
23	GO:0006650: glycerophospholipid metabolic process	1.16E-03
24	GO:0010271: regulation of chlorophyll catabolic process	1.16E-03
25	GO:0045493: xylan catabolic process	1.91E-03
26	GO:0030029: actin filament-based process	1.91E-03
27	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	1.91E-03
28	GO:0010447: response to acidic pH	1.91E-03
29	GO:0031022: nuclear migration along microfilament	1.91E-03
30	GO:0046168: glycerol-3-phosphate catabolic process	1.91E-03
31	GO:0010582: floral meristem determinacy	1.91E-03
32	GO:0080117: secondary growth	1.91E-03
33	GO:0042780: tRNA 3'-end processing	1.91E-03
34	GO:0010540: basipetal auxin transport	2.45E-03
35	GO:0080188: RNA-directed DNA methylation	2.74E-03
36	GO:0045017: glycerolipid biosynthetic process	2.76E-03
37	GO:0051513: regulation of monopolar cell growth	2.76E-03
38	GO:0009102: biotin biosynthetic process	2.76E-03
39	GO:0051639: actin filament network formation	2.76E-03
40	GO:0034059: response to anoxia	2.76E-03
41	GO:0010239: chloroplast mRNA processing	2.76E-03
42	GO:0044211: CTP salvage	2.76E-03
43	GO:0006072: glycerol-3-phosphate metabolic process	2.76E-03
44	GO:0009800: cinnamic acid biosynthetic process	2.76E-03
45	GO:2000904: regulation of starch metabolic process	2.76E-03
46	GO:0009956: radial pattern formation	3.72E-03
47	GO:0051764: actin crosslink formation	3.72E-03
48	GO:0044206: UMP salvage	3.72E-03
49	GO:0006021: inositol biosynthetic process	3.72E-03
50	GO:0009107: lipoate biosynthetic process	4.78E-03
51	GO:0010158: abaxial cell fate specification	4.78E-03
52	GO:0009696: salicylic acid metabolic process	4.78E-03
53	GO:0080110: sporopollenin biosynthetic process	4.78E-03
54	GO:0009904: chloroplast accumulation movement	4.78E-03
55	GO:0009793: embryo development ending in seed dormancy	5.13E-03
56	GO:0048827: phyllome development	5.92E-03
57	GO:0016554: cytidine to uridine editing	5.92E-03
58	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	5.92E-03
59	GO:0006559: L-phenylalanine catabolic process	5.92E-03
60	GO:0006206: pyrimidine nucleobase metabolic process	5.92E-03
61	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	5.92E-03
62	GO:0048831: regulation of shoot system development	5.92E-03
63	GO:0003006: developmental process involved in reproduction	5.92E-03
64	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	7.16E-03
65	GO:2000067: regulation of root morphogenesis	7.16E-03
66	GO:0048509: regulation of meristem development	7.16E-03
67	GO:0009903: chloroplast avoidance movement	7.16E-03
68	GO:0009416: response to light stimulus	7.44E-03
69	GO:0009610: response to symbiotic fungus	8.47E-03
70	GO:0010050: vegetative phase change	8.47E-03
71	GO:0010098: suspensor development	8.47E-03
72	GO:0000105: histidine biosynthetic process	9.87E-03
73	GO:0006353: DNA-templated transcription, termination	9.87E-03
74	GO:0070413: trehalose metabolism in response to stress	9.87E-03
75	GO:0009850: auxin metabolic process	9.87E-03
76	GO:0009639: response to red or far red light	1.02E-02
77	GO:0009658: chloroplast organization	1.09E-02
78	GO:0071482: cellular response to light stimulus	1.13E-02
79	GO:0009827: plant-type cell wall modification	1.13E-02
80	GO:0007186: G-protein coupled receptor signaling pathway	1.13E-02
81	GO:0009657: plastid organization	1.13E-02
82	GO:0032544: plastid translation	1.13E-02
83	GO:0044030: regulation of DNA methylation	1.13E-02
84	GO:0009056: catabolic process	1.29E-02
85	GO:0048507: meristem development	1.29E-02
86	GO:0009627: systemic acquired resistance	1.37E-02
87	GO:0010411: xyloglucan metabolic process	1.44E-02
88	GO:0016573: histone acetylation	1.45E-02
89	GO:0010018: far-red light signaling pathway	1.45E-02
90	GO:1900865: chloroplast RNA modification	1.45E-02
91	GO:0016571: histone methylation	1.45E-02
92	GO:0008202: steroid metabolic process	1.45E-02
93	GO:0030244: cellulose biosynthetic process	1.60E-02
94	GO:0048829: root cap development	1.62E-02
95	GO:0010192: mucilage biosynthetic process	1.62E-02
96	GO:0006535: cysteine biosynthetic process from serine	1.62E-02
97	GO:0000160: phosphorelay signal transduction system	1.68E-02
98	GO:0016485: protein processing	1.80E-02
99	GO:0048765: root hair cell differentiation	1.80E-02
100	GO:0006415: translational termination	1.80E-02
101	GO:0009089: lysine biosynthetic process via diaminopimelate	1.80E-02
102	GO:0007568: aging	1.85E-02
103	GO:0006790: sulfur compound metabolic process	1.98E-02
104	GO:0045037: protein import into chloroplast stroma	1.98E-02
105	GO:0010229: inflorescence development	2.17E-02
106	GO:0009266: response to temperature stimulus	2.36E-02
107	GO:0048467: gynoecium development	2.36E-02
108	GO:0010020: chloroplast fission	2.36E-02
109	GO:0009933: meristem structural organization	2.36E-02
110	GO:0046854: phosphatidylinositol phosphorylation	2.56E-02
111	GO:0009825: multidimensional cell growth	2.56E-02
112	GO:0010039: response to iron ion	2.56E-02
113	GO:0009926: auxin polar transport	2.62E-02
114	GO:0006863: purine nucleobase transport	2.77E-02
115	GO:0009833: plant-type primary cell wall biogenesis	2.77E-02
116	GO:0042753: positive regulation of circadian rhythm	2.77E-02
117	GO:0009636: response to toxic substance	2.95E-02
118	GO:0009965: leaf morphogenesis	2.95E-02
119	GO:0019344: cysteine biosynthetic process	2.98E-02
120	GO:0030150: protein import into mitochondrial matrix	2.98E-02
121	GO:0006338: chromatin remodeling	2.98E-02
122	GO:0051017: actin filament bundle assembly	2.98E-02
123	GO:0006289: nucleotide-excision repair	2.98E-02
124	GO:0006306: DNA methylation	3.42E-02
125	GO:0003333: amino acid transmembrane transport	3.42E-02
126	GO:0009736: cytokinin-activated signaling pathway	3.53E-02
127	GO:0035428: hexose transmembrane transport	3.65E-02
128	GO:0016226: iron-sulfur cluster assembly	3.65E-02
129	GO:0071215: cellular response to abscisic acid stimulus	3.88E-02
130	GO:0009686: gibberellin biosynthetic process	3.88E-02
131	GO:0010584: pollen exine formation	4.12E-02
132	GO:0006284: base-excision repair	4.12E-02
133	GO:0016117: carotenoid biosynthetic process	4.36E-02
134	GO:0070417: cellular response to cold	4.36E-02
135	GO:0009734: auxin-activated signaling pathway	4.44E-02
136	GO:0010087: phloem or xylem histogenesis	4.61E-02
137	GO:0048653: anther development	4.61E-02
138	GO:0010182: sugar mediated signaling pathway	4.86E-02
139	GO:0048868: pollen tube development	4.86E-02
140	GO:0046323: glucose import	4.86E-02
141	GO:0045489: pectin biosynthetic process	4.86E-02
142	GO:0010305: leaf vascular tissue pattern formation	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0004401: histidinol-phosphatase activity	0.00E+00
4	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
5	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
6	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
7	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
8	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
9	GO:0008805: carbon-monoxide oxygenase activity	1.28E-05
10	GO:0004805: trehalose-phosphatase activity	1.07E-04
11	GO:0010347: L-galactose-1-phosphate phosphatase activity	5.40E-04
12	GO:0005227: calcium activated cation channel activity	5.40E-04
13	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	5.40E-04
14	GO:0008836: diaminopimelate decarboxylase activity	5.40E-04
15	GO:0005290: L-histidine transmembrane transporter activity	5.40E-04
16	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	5.40E-04
17	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.40E-04
18	GO:0004519: endonuclease activity	8.17E-04
19	GO:0050017: L-3-cyanoalanine synthase activity	1.16E-03
20	GO:0017118: lipoyltransferase activity	1.16E-03
21	GO:0010296: prenylcysteine methylesterase activity	1.16E-03
22	GO:0016415: octanoyltransferase activity	1.16E-03
23	GO:0004047: aminomethyltransferase activity	1.16E-03
24	GO:0052832: inositol monophosphate 3-phosphatase activity	1.16E-03
25	GO:0008934: inositol monophosphate 1-phosphatase activity	1.16E-03
26	GO:0052833: inositol monophosphate 4-phosphatase activity	1.16E-03
27	GO:0000064: L-ornithine transmembrane transporter activity	1.16E-03
28	GO:0050736: O-malonyltransferase activity	1.16E-03
29	GO:0009884: cytokinin receptor activity	1.16E-03
30	GO:0004871: signal transducer activity	1.73E-03
31	GO:0005034: osmosensor activity	1.91E-03
32	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.91E-03
33	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.91E-03
34	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	1.91E-03
35	GO:0045548: phenylalanine ammonia-lyase activity	1.91E-03
36	GO:0042781: 3'-tRNA processing endoribonuclease activity	1.91E-03
37	GO:0004148: dihydrolipoyl dehydrogenase activity	1.91E-03
38	GO:0080031: methyl salicylate esterase activity	2.76E-03
39	GO:0015189: L-lysine transmembrane transporter activity	2.76E-03
40	GO:0015181: arginine transmembrane transporter activity	2.76E-03
41	GO:0017172: cysteine dioxygenase activity	2.76E-03
42	GO:0046556: alpha-L-arabinofuranosidase activity	3.72E-03
43	GO:0004845: uracil phosphoribosyltransferase activity	3.72E-03
44	GO:0010011: auxin binding	3.72E-03
45	GO:0010328: auxin influx transmembrane transporter activity	3.72E-03
46	GO:0010385: double-stranded methylated DNA binding	3.72E-03
47	GO:0070628: proteasome binding	3.72E-03
48	GO:0046527: glucosyltransferase activity	3.72E-03
49	GO:0009044: xylan 1,4-beta-xylosidase activity	3.72E-03
50	GO:0003723: RNA binding	4.06E-03
51	GO:0005471: ATP:ADP antiporter activity	4.78E-03
52	GO:0008725: DNA-3-methyladenine glycosylase activity	4.78E-03
53	GO:0043621: protein self-association	5.48E-03
54	GO:0080030: methyl indole-3-acetate esterase activity	5.92E-03
55	GO:0004709: MAP kinase kinase kinase activity	5.92E-03
56	GO:0000293: ferric-chelate reductase activity	5.92E-03
57	GO:0031593: polyubiquitin binding	5.92E-03
58	GO:0004462: lactoylglutathione lyase activity	5.92E-03
59	GO:0019900: kinase binding	7.16E-03
60	GO:0004124: cysteine synthase activity	7.16E-03
61	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	7.16E-03
62	GO:0004849: uridine kinase activity	7.16E-03
63	GO:0019899: enzyme binding	8.47E-03
64	GO:0016759: cellulose synthase activity	1.02E-02
65	GO:0008142: oxysterol binding	1.13E-02
66	GO:0016413: O-acetyltransferase activity	1.15E-02
67	GO:0003747: translation release factor activity	1.29E-02
68	GO:0015020: glucuronosyltransferase activity	1.62E-02
69	GO:0004673: protein histidine kinase activity	1.62E-02
70	GO:0005096: GTPase activator activity	1.68E-02
71	GO:0004222: metalloendopeptidase activity	1.77E-02
72	GO:0008327: methyl-CpG binding	1.80E-02
73	GO:0000155: phosphorelay sensor kinase activity	2.17E-02
74	GO:0009982: pseudouridine synthase activity	2.17E-02
75	GO:0015266: protein channel activity	2.17E-02
76	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.22E-02
77	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.77E-02
78	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.77E-02
79	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.77E-02
80	GO:0035091: phosphatidylinositol binding	2.84E-02
81	GO:0031418: L-ascorbic acid binding	2.98E-02
82	GO:0004857: enzyme inhibitor activity	2.98E-02
83	GO:0043130: ubiquitin binding	2.98E-02
84	GO:0008134: transcription factor binding	2.98E-02
85	GO:0043424: protein histidine kinase binding	3.20E-02
86	GO:0005345: purine nucleobase transmembrane transporter activity	3.20E-02
87	GO:0016760: cellulose synthase (UDP-forming) activity	3.88E-02
88	GO:0030570: pectate lyase activity	3.88E-02
89	GO:0016788: hydrolase activity, acting on ester bonds	4.03E-02
90	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.58E-02
91	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.58E-02
92	GO:0004402: histone acetyltransferase activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0009507: chloroplast	1.02E-04
5	GO:0010370: perinucleolar chromocenter	5.40E-04
6	GO:0009513: etioplast	1.16E-03
7	GO:0009509: chromoplast	1.91E-03
8	GO:0009707: chloroplast outer membrane	2.64E-03
9	GO:0032432: actin filament bundle	2.76E-03
10	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.76E-03
11	GO:0009986: cell surface	8.47E-03
12	GO:0031305: integral component of mitochondrial inner membrane	9.87E-03
13	GO:0048226: Casparian strip	9.87E-03
14	GO:0009501: amyloplast	9.87E-03
15	GO:0030529: intracellular ribonucleoprotein complex	1.22E-02
16	GO:0005720: nuclear heterochromatin	1.29E-02
17	GO:0005884: actin filament	1.80E-02
18	GO:0016602: CCAAT-binding factor complex	2.17E-02
19	GO:0009574: preprophase band	2.17E-02
20	GO:0030095: chloroplast photosystem II	2.36E-02
21	GO:0031977: thylakoid lumen	2.42E-02
22	GO:0000419: DNA-directed RNA polymerase V complex	2.77E-02
23	GO:0043231: intracellular membrane-bounded organelle	3.12E-02
24	GO:0009654: photosystem II oxygen evolving complex	3.20E-02
25	GO:0009532: plastid stroma	3.42E-02
26	GO:0009570: chloroplast stroma	3.84E-02
27	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.12E-02
28	GO:0005871: kinesin complex	4.36E-02
29	GO:0005770: late endosome	4.86E-02