GO Enrichment Analysis of Co-expressed Genes with
AT4G16660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 2 | GO:0005993: trehalose catabolic process | 0.00E+00 |
| 3 | GO:0052386: cell wall thickening | 0.00E+00 |
| 4 | GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress | 0.00E+00 |
| 5 | GO:0080149: sucrose induced translational repression | 0.00E+00 |
| 6 | GO:0097250: mitochondrial respiratory chain supercomplex assembly | 0.00E+00 |
| 7 | GO:0010407: non-classical arabinogalactan protein metabolic process | 0.00E+00 |
| 8 | GO:2000068: regulation of defense response to insect | 0.00E+00 |
| 9 | GO:0006457: protein folding | 6.51E-07 |
| 10 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.29E-06 |
| 11 | GO:0000077: DNA damage checkpoint | 1.56E-04 |
| 12 | GO:0042350: GDP-L-fucose biosynthetic process | 1.56E-04 |
| 13 | GO:1990641: response to iron ion starvation | 1.56E-04 |
| 14 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 1.56E-04 |
| 15 | GO:1990022: RNA polymerase III complex localization to nucleus | 1.56E-04 |
| 16 | GO:0043182: vacuolar sequestering of sodium ion | 1.56E-04 |
| 17 | GO:0044376: RNA polymerase II complex import to nucleus | 1.56E-04 |
| 18 | GO:0051090: regulation of sequence-specific DNA binding transcription factor activity | 1.56E-04 |
| 19 | GO:1903648: positive regulation of chlorophyll catabolic process | 1.56E-04 |
| 20 | GO:0006886: intracellular protein transport | 2.34E-04 |
| 21 | GO:0015031: protein transport | 3.32E-04 |
| 22 | GO:0006568: tryptophan metabolic process | 3.55E-04 |
| 23 | GO:0042853: L-alanine catabolic process | 3.55E-04 |
| 24 | GO:0040020: regulation of meiotic nuclear division | 3.55E-04 |
| 25 | GO:0052542: defense response by callose deposition | 3.55E-04 |
| 26 | GO:0006101: citrate metabolic process | 3.55E-04 |
| 27 | GO:0034976: response to endoplasmic reticulum stress | 5.28E-04 |
| 28 | GO:0032504: multicellular organism reproduction | 5.82E-04 |
| 29 | GO:0009410: response to xenobiotic stimulus | 5.82E-04 |
| 30 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 5.82E-04 |
| 31 | GO:0009863: salicylic acid mediated signaling pathway | 5.84E-04 |
| 32 | GO:0072334: UDP-galactose transmembrane transport | 8.33E-04 |
| 33 | GO:0009963: positive regulation of flavonoid biosynthetic process | 8.33E-04 |
| 34 | GO:0009226: nucleotide-sugar biosynthetic process | 8.33E-04 |
| 35 | GO:0071323: cellular response to chitin | 8.33E-04 |
| 36 | GO:0055070: copper ion homeostasis | 8.33E-04 |
| 37 | GO:0007275: multicellular organism development | 8.85E-04 |
| 38 | GO:0009306: protein secretion | 9.07E-04 |
| 39 | GO:0016192: vesicle-mediated transport | 1.02E-03 |
| 40 | GO:1902584: positive regulation of response to water deprivation | 1.10E-03 |
| 41 | GO:0006621: protein retention in ER lumen | 1.10E-03 |
| 42 | GO:1901002: positive regulation of response to salt stress | 1.10E-03 |
| 43 | GO:0000003: reproduction | 1.10E-03 |
| 44 | GO:0006623: protein targeting to vacuole | 1.30E-03 |
| 45 | GO:0045927: positive regulation of growth | 1.40E-03 |
| 46 | GO:0006097: glyoxylate cycle | 1.40E-03 |
| 47 | GO:0009408: response to heat | 1.70E-03 |
| 48 | GO:0047484: regulation of response to osmotic stress | 1.72E-03 |
| 49 | GO:0009759: indole glucosinolate biosynthetic process | 1.72E-03 |
| 50 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.06E-03 |
| 51 | GO:0034389: lipid particle organization | 2.06E-03 |
| 52 | GO:0017148: negative regulation of translation | 2.06E-03 |
| 53 | GO:0006744: ubiquinone biosynthetic process | 2.42E-03 |
| 54 | GO:0080186: developmental vegetative growth | 2.42E-03 |
| 55 | GO:1900057: positive regulation of leaf senescence | 2.42E-03 |
| 56 | GO:0010044: response to aluminum ion | 2.42E-03 |
| 57 | GO:0007155: cell adhesion | 2.80E-03 |
| 58 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 2.80E-03 |
| 59 | GO:1900150: regulation of defense response to fungus | 2.80E-03 |
| 60 | GO:0006605: protein targeting | 2.80E-03 |
| 61 | GO:0006102: isocitrate metabolic process | 2.80E-03 |
| 62 | GO:0006002: fructose 6-phosphate metabolic process | 3.21E-03 |
| 63 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 3.21E-03 |
| 64 | GO:0010417: glucuronoxylan biosynthetic process | 3.21E-03 |
| 65 | GO:0015780: nucleotide-sugar transport | 3.63E-03 |
| 66 | GO:0010332: response to gamma radiation | 3.63E-03 |
| 67 | GO:0090332: stomatal closure | 4.06E-03 |
| 68 | GO:0009086: methionine biosynthetic process | 4.06E-03 |
| 69 | GO:0008202: steroid metabolic process | 4.06E-03 |
| 70 | GO:0000209: protein polyubiquitination | 4.38E-03 |
| 71 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.52E-03 |
| 72 | GO:0052544: defense response by callose deposition in cell wall | 4.99E-03 |
| 73 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 5.09E-03 |
| 74 | GO:0000266: mitochondrial fission | 5.48E-03 |
| 75 | GO:0045037: protein import into chloroplast stroma | 5.48E-03 |
| 76 | GO:0007034: vacuolar transport | 6.50E-03 |
| 77 | GO:0006096: glycolytic process | 6.69E-03 |
| 78 | GO:0010053: root epidermal cell differentiation | 7.04E-03 |
| 79 | GO:0007030: Golgi organization | 7.04E-03 |
| 80 | GO:0070588: calcium ion transmembrane transport | 7.04E-03 |
| 81 | GO:0000162: tryptophan biosynthetic process | 7.59E-03 |
| 82 | GO:0009553: embryo sac development | 7.82E-03 |
| 83 | GO:0030150: protein import into mitochondrial matrix | 8.16E-03 |
| 84 | GO:0008299: isoprenoid biosynthetic process | 8.74E-03 |
| 85 | GO:0019915: lipid storage | 9.34E-03 |
| 86 | GO:0009269: response to desiccation | 9.34E-03 |
| 87 | GO:0048278: vesicle docking | 9.34E-03 |
| 88 | GO:0009814: defense response, incompatible interaction | 9.96E-03 |
| 89 | GO:0030433: ubiquitin-dependent ERAD pathway | 9.96E-03 |
| 90 | GO:0009411: response to UV | 1.06E-02 |
| 91 | GO:0009058: biosynthetic process | 1.07E-02 |
| 92 | GO:0010584: pollen exine formation | 1.12E-02 |
| 93 | GO:0009790: embryo development | 1.18E-02 |
| 94 | GO:0010051: xylem and phloem pattern formation | 1.25E-02 |
| 95 | GO:0006413: translational initiation | 1.30E-02 |
| 96 | GO:0045489: pectin biosynthetic process | 1.32E-02 |
| 97 | GO:0008360: regulation of cell shape | 1.32E-02 |
| 98 | GO:0010197: polar nucleus fusion | 1.32E-02 |
| 99 | GO:0061025: membrane fusion | 1.39E-02 |
| 100 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.54E-02 |
| 101 | GO:0016032: viral process | 1.61E-02 |
| 102 | GO:0009738: abscisic acid-activated signaling pathway | 1.68E-02 |
| 103 | GO:0009555: pollen development | 1.75E-02 |
| 104 | GO:0001666: response to hypoxia | 1.99E-02 |
| 105 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.07E-02 |
| 106 | GO:0009816: defense response to bacterium, incompatible interaction | 2.07E-02 |
| 107 | GO:0045893: positive regulation of transcription, DNA-templated | 2.09E-02 |
| 108 | GO:0006906: vesicle fusion | 2.16E-02 |
| 109 | GO:0046686: response to cadmium ion | 2.31E-02 |
| 110 | GO:0048767: root hair elongation | 2.50E-02 |
| 111 | GO:0009867: jasmonic acid mediated signaling pathway | 2.85E-02 |
| 112 | GO:0045087: innate immune response | 2.85E-02 |
| 113 | GO:0016051: carbohydrate biosynthetic process | 2.85E-02 |
| 114 | GO:0006099: tricarboxylic acid cycle | 2.94E-02 |
| 115 | GO:0006631: fatty acid metabolic process | 3.22E-02 |
| 116 | GO:0009744: response to sucrose | 3.42E-02 |
| 117 | GO:0051707: response to other organism | 3.42E-02 |
| 118 | GO:0010114: response to red light | 3.42E-02 |
| 119 | GO:0009965: leaf morphogenesis | 3.71E-02 |
| 120 | GO:0016042: lipid catabolic process | 3.85E-02 |
| 121 | GO:0042538: hyperosmotic salinity response | 4.01E-02 |
| 122 | GO:0048364: root development | 4.13E-02 |
| 123 | GO:0006486: protein glycosylation | 4.22E-02 |
| 124 | GO:0006351: transcription, DNA-templated | 4.25E-02 |
| 125 | GO:0006979: response to oxidative stress | 4.26E-02 |
| 126 | GO:0010224: response to UV-B | 4.33E-02 |
| 127 | GO:0006857: oligopeptide transport | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004555: alpha,alpha-trehalase activity | 0.00E+00 |
| 2 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 4 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 5 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 6 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 7 | GO:0051082: unfolded protein binding | 1.02E-05 |
| 8 | GO:0005460: UDP-glucose transmembrane transporter activity | 1.03E-05 |
| 9 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.14E-05 |
| 10 | GO:0050577: GDP-L-fucose synthase activity | 1.56E-04 |
| 11 | GO:0015927: trehalase activity | 1.56E-04 |
| 12 | GO:1990381: ubiquitin-specific protease binding | 1.56E-04 |
| 13 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 1.56E-04 |
| 14 | GO:0003994: aconitate hydratase activity | 3.55E-04 |
| 15 | GO:0050347: trans-octaprenyltranstransferase activity | 3.55E-04 |
| 16 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 3.55E-04 |
| 17 | GO:0000774: adenyl-nucleotide exchange factor activity | 3.55E-04 |
| 18 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.55E-04 |
| 19 | GO:0005388: calcium-transporting ATPase activity | 3.74E-04 |
| 20 | GO:0000975: regulatory region DNA binding | 5.82E-04 |
| 21 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 8.33E-04 |
| 22 | GO:0004834: tryptophan synthase activity | 1.10E-03 |
| 23 | GO:0046923: ER retention sequence binding | 1.10E-03 |
| 24 | GO:0070628: proteasome binding | 1.10E-03 |
| 25 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 1.10E-03 |
| 26 | GO:0004659: prenyltransferase activity | 1.10E-03 |
| 27 | GO:0004623: phospholipase A2 activity | 1.40E-03 |
| 28 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.06E-03 |
| 29 | GO:0003872: 6-phosphofructokinase activity | 2.42E-03 |
| 30 | GO:0008320: protein transmembrane transporter activity | 2.42E-03 |
| 31 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 2.80E-03 |
| 32 | GO:0008142: oxysterol binding | 3.21E-03 |
| 33 | GO:0003843: 1,3-beta-D-glucan synthase activity | 3.21E-03 |
| 34 | GO:0004630: phospholipase D activity | 3.21E-03 |
| 35 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 3.21E-03 |
| 36 | GO:0003746: translation elongation factor activity | 3.27E-03 |
| 37 | GO:0004743: pyruvate kinase activity | 4.06E-03 |
| 38 | GO:0030955: potassium ion binding | 4.06E-03 |
| 39 | GO:0030234: enzyme regulator activity | 4.52E-03 |
| 40 | GO:0004161: dimethylallyltranstransferase activity | 4.99E-03 |
| 41 | GO:0008378: galactosyltransferase activity | 5.48E-03 |
| 42 | GO:0015198: oligopeptide transporter activity | 5.48E-03 |
| 43 | GO:0005524: ATP binding | 5.74E-03 |
| 44 | GO:0031072: heat shock protein binding | 5.98E-03 |
| 45 | GO:0042803: protein homodimerization activity | 6.87E-03 |
| 46 | GO:0008061: chitin binding | 7.04E-03 |
| 47 | GO:0003712: transcription cofactor activity | 7.04E-03 |
| 48 | GO:0022857: transmembrane transporter activity | 7.59E-03 |
| 49 | GO:0031418: L-ascorbic acid binding | 8.16E-03 |
| 50 | GO:0043130: ubiquitin binding | 8.16E-03 |
| 51 | GO:0003924: GTPase activity | 8.46E-03 |
| 52 | GO:0051087: chaperone binding | 8.74E-03 |
| 53 | GO:0016758: transferase activity, transferring hexosyl groups | 9.83E-03 |
| 54 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 9.96E-03 |
| 55 | GO:0005509: calcium ion binding | 1.05E-02 |
| 56 | GO:0003756: protein disulfide isomerase activity | 1.12E-02 |
| 57 | GO:0030170: pyridoxal phosphate binding | 1.12E-02 |
| 58 | GO:0005102: receptor binding | 1.19E-02 |
| 59 | GO:0016853: isomerase activity | 1.39E-02 |
| 60 | GO:0050662: coenzyme binding | 1.39E-02 |
| 61 | GO:0004872: receptor activity | 1.46E-02 |
| 62 | GO:0003743: translation initiation factor activity | 1.63E-02 |
| 63 | GO:0043565: sequence-specific DNA binding | 1.95E-02 |
| 64 | GO:0030247: polysaccharide binding | 2.24E-02 |
| 65 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.41E-02 |
| 66 | GO:0004222: metalloendopeptidase activity | 2.58E-02 |
| 67 | GO:0050897: cobalt ion binding | 2.67E-02 |
| 68 | GO:0005507: copper ion binding | 2.73E-02 |
| 69 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.85E-02 |
| 70 | GO:0000149: SNARE binding | 3.04E-02 |
| 71 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.13E-02 |
| 72 | GO:0005484: SNAP receptor activity | 3.42E-02 |
| 73 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.61E-02 |
| 74 | GO:0035091: phosphatidylinositol binding | 3.61E-02 |
| 75 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 3.97E-02 |
| 76 | GO:0045735: nutrient reservoir activity | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005788: endoplasmic reticulum lumen | 1.01E-05 |
| 2 | GO:0005789: endoplasmic reticulum membrane | 2.04E-05 |
| 3 | GO:0005801: cis-Golgi network | 6.56E-05 |
| 4 | GO:0000836: Hrd1p ubiquitin ligase complex | 1.56E-04 |
| 5 | GO:0044322: endoplasmic reticulum quality control compartment | 1.56E-04 |
| 6 | GO:0001405: presequence translocase-associated import motor | 1.56E-04 |
| 7 | GO:0030665: clathrin-coated vesicle membrane | 2.08E-04 |
| 8 | GO:0005783: endoplasmic reticulum | 2.10E-04 |
| 9 | GO:0017119: Golgi transport complex | 2.46E-04 |
| 10 | GO:0030134: ER to Golgi transport vesicle | 3.55E-04 |
| 11 | GO:0016021: integral component of membrane | 4.21E-04 |
| 12 | GO:0031902: late endosome membrane | 4.55E-04 |
| 13 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.74E-04 |
| 14 | GO:0030658: transport vesicle membrane | 8.33E-04 |
| 15 | GO:0036513: Derlin-1 retrotranslocation complex | 8.33E-04 |
| 16 | GO:0005945: 6-phosphofructokinase complex | 1.40E-03 |
| 17 | GO:0000139: Golgi membrane | 1.46E-03 |
| 18 | GO:0016592: mediator complex | 1.48E-03 |
| 19 | GO:0005794: Golgi apparatus | 1.48E-03 |
| 20 | GO:0030173: integral component of Golgi membrane | 2.06E-03 |
| 21 | GO:0016272: prefoldin complex | 2.06E-03 |
| 22 | GO:0005774: vacuolar membrane | 3.04E-03 |
| 23 | GO:0000148: 1,3-beta-D-glucan synthase complex | 3.21E-03 |
| 24 | GO:0005811: lipid particle | 3.21E-03 |
| 25 | GO:0008541: proteasome regulatory particle, lid subcomplex | 4.99E-03 |
| 26 | GO:0005886: plasma membrane | 6.71E-03 |
| 27 | GO:0005795: Golgi stack | 7.04E-03 |
| 28 | GO:0031410: cytoplasmic vesicle | 9.96E-03 |
| 29 | GO:0005623: cell | 1.04E-02 |
| 30 | GO:0005887: integral component of plasma membrane | 1.25E-02 |
| 31 | GO:0005773: vacuole | 2.10E-02 |
| 32 | GO:0005874: microtubule | 2.60E-02 |
| 33 | GO:0000325: plant-type vacuole | 2.67E-02 |
| 34 | GO:0005802: trans-Golgi network | 3.16E-02 |
| 35 | GO:0005739: mitochondrion | 3.18E-02 |
| 36 | GO:0031201: SNARE complex | 3.22E-02 |
| 37 | GO:0005768: endosome | 3.71E-02 |
| 38 | GO:0043231: intracellular membrane-bounded organelle | 4.36E-02 |
| 39 | GO:0005834: heterotrimeric G-protein complex | 4.97E-02 |