co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046396: D-galacturonate metabolic process	0.00E+00
2	GO:0007389: pattern specification process	8.31E-05
3	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.10E-04
4	GO:0051171: regulation of nitrogen compound metabolic process	1.10E-04
5	GO:0080005: photosystem stoichiometry adjustment	2.57E-04
6	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.57E-04
7	GO:0006013: mannose metabolic process	4.25E-04
8	GO:0010255: glucose mediated signaling pathway	6.10E-04
9	GO:0015846: polyamine transport	8.10E-04
10	GO:0016558: protein import into peroxisome matrix	1.02E-03
11	GO:0010252: auxin homeostasis	1.05E-03
12	GO:0042549: photosystem II stabilization	1.25E-03
13	GO:0009942: longitudinal axis specification	1.49E-03
14	GO:0048444: floral organ morphogenesis	1.49E-03
15	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.49E-03
16	GO:0046835: carbohydrate phosphorylation	1.49E-03
17	GO:0006401: RNA catabolic process	1.75E-03
18	GO:0009704: de-etiolation	2.03E-03
19	GO:0010052: guard cell differentiation	2.32E-03
20	GO:0006002: fructose 6-phosphate metabolic process	2.32E-03
21	GO:0009926: auxin polar transport	2.61E-03
22	GO:0008202: steroid metabolic process	2.93E-03
23	GO:0010380: regulation of chlorophyll biosynthetic process	2.93E-03
24	GO:0009750: response to fructose	3.59E-03
25	GO:0009934: regulation of meristem structural organization	4.66E-03
26	GO:0009740: gibberellic acid mediated signaling pathway	4.69E-03
27	GO:0010187: negative regulation of seed germination	5.84E-03
28	GO:0051302: regulation of cell division	6.25E-03
29	GO:0010082: regulation of root meristem growth	7.55E-03
30	GO:0006012: galactose metabolic process	7.55E-03
31	GO:0006284: base-excision repair	8.00E-03
32	GO:0007623: circadian rhythm	8.60E-03
33	GO:0009451: RNA modification	8.79E-03
34	GO:0048868: pollen tube development	9.41E-03
35	GO:0010468: regulation of gene expression	1.03E-02
36	GO:0009749: response to glucose	1.04E-02
37	GO:0006635: fatty acid beta-oxidation	1.09E-02
38	GO:0002229: defense response to oomycetes	1.09E-02
39	GO:0010583: response to cyclopentenone	1.14E-02
40	GO:0071281: cellular response to iron ion	1.20E-02
41	GO:0009658: chloroplast organization	1.33E-02
42	GO:0080167: response to karrikin	1.66E-02
43	GO:0006355: regulation of transcription, DNA-templated	1.68E-02
44	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.71E-02
45	GO:0000160: phosphorelay signal transduction system	1.77E-02
46	GO:0007568: aging	1.89E-02
47	GO:0009910: negative regulation of flower development	1.89E-02
48	GO:0009853: photorespiration	2.02E-02
49	GO:0009744: response to sucrose	2.42E-02
50	GO:0051707: response to other organism	2.42E-02
51	GO:0048364: root development	2.55E-02
52	GO:0008152: metabolic process	2.70E-02
53	GO:0006260: DNA replication	2.77E-02
54	GO:0009736: cytokinin-activated signaling pathway	2.99E-02
55	GO:0006364: rRNA processing	2.99E-02
56	GO:0051603: proteolysis involved in cellular protein catabolic process	3.07E-02
57	GO:0009873: ethylene-activated signaling pathway	3.16E-02
58	GO:0006417: regulation of translation	3.22E-02
59	GO:0006096: glycolytic process	3.37E-02
60	GO:0043086: negative regulation of catalytic activity	3.37E-02
61	GO:0009734: auxin-activated signaling pathway	3.44E-02
62	GO:0009553: embryo sac development	3.77E-02
63	GO:0051726: regulation of cell cycle	4.01E-02
64	GO:0009416: response to light stimulus	4.33E-02
65	GO:0035556: intracellular signal transduction	4.56E-02
66	GO:0042744: hydrogen peroxide catabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0047912: galacturonokinase activity	0.00E+00
2	GO:0019808: polyamine binding	0.00E+00
3	GO:0003858: 3-hydroxybutyrate dehydrogenase activity	0.00E+00
4	GO:0008859: exoribonuclease II activity	0.00E+00
5	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	1.10E-04
6	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	1.10E-04
7	GO:0009672: auxin:proton symporter activity	1.24E-04
8	GO:0010329: auxin efflux transmembrane transporter activity	2.30E-04
9	GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity	2.57E-04
10	GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity	2.57E-04
11	GO:0030267: glyoxylate reductase (NADP) activity	4.25E-04
12	GO:0004335: galactokinase activity	8.10E-04
13	GO:0008725: DNA-3-methyladenine glycosylase activity	1.02E-03
14	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.49E-03
15	GO:0004559: alpha-mannosidase activity	1.49E-03
16	GO:0019899: enzyme binding	1.75E-03
17	GO:0003872: 6-phosphofructokinase activity	1.75E-03
18	GO:0008142: oxysterol binding	2.32E-03
19	GO:0051537: 2 iron, 2 sulfur cluster binding	2.82E-03
20	GO:0015020: glucuronosyltransferase activity	3.25E-03
21	GO:0008327: methyl-CpG binding	3.59E-03
22	GO:0009982: pseudouridine synthase activity	4.30E-03
23	GO:0000175: 3'-5'-exoribonuclease activity	4.30E-03
24	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.55E-03
25	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.55E-03
26	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	4.66E-03
27	GO:0004857: enzyme inhibitor activity	5.84E-03
28	GO:0004540: ribonuclease activity	6.67E-03
29	GO:0008080: N-acetyltransferase activity	9.41E-03
30	GO:0001085: RNA polymerase II transcription factor binding	9.41E-03
31	GO:0008194: UDP-glycosyltransferase activity	9.62E-03
32	GO:0004672: protein kinase activity	1.02E-02
33	GO:0019901: protein kinase binding	1.04E-02
34	GO:0000156: phosphorelay response regulator activity	1.20E-02
35	GO:0008236: serine-type peptidase activity	1.65E-02
36	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.83E-02
37	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.89E-02
38	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.02E-02
39	GO:0003993: acid phosphatase activity	2.09E-02
40	GO:0004185: serine-type carboxypeptidase activity	2.42E-02
41	GO:0043621: protein self-association	2.56E-02
42	GO:0035091: phosphatidylinositol binding	2.56E-02
43	GO:0005215: transporter activity	2.62E-02
44	GO:0051287: NAD binding	2.77E-02
45	GO:0003777: microtubule motor activity	3.22E-02
46	GO:0046872: metal ion binding	3.28E-02
47	GO:0051082: unfolded protein binding	3.85E-02
48	GO:0016758: transferase activity, transferring hexosyl groups	4.43E-02
49	GO:0019843: rRNA binding	4.51E-02
50	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0010370: perinucleolar chromocenter	1.10E-04
3	GO:0000178: exosome (RNase complex)	1.02E-03
4	GO:0005945: 6-phosphofructokinase complex	1.02E-03
5	GO:0005720: nuclear heterochromatin	2.62E-03
6	GO:0045271: respiratory chain complex I	6.25E-03
7	GO:0000932: P-body	1.42E-02
8	GO:0005667: transcription factor complex	1.53E-02
9	GO:0009507: chloroplast	1.56E-02
10	GO:0009707: chloroplast outer membrane	1.71E-02
11	GO:0005819: spindle	2.15E-02
12	GO:0031977: thylakoid lumen	2.29E-02
13	GO:0043231: intracellular membrane-bounded organelle	2.70E-02
14	GO:0031966: mitochondrial membrane	2.85E-02
15	GO:0005747: mitochondrial respiratory chain complex I	3.45E-02
16	GO:0009543: chloroplast thylakoid lumen	4.51E-02