Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G16600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080180: 2-methylguanosine metabolic process0.00E+00
2GO:0071731: response to nitric oxide0.00E+00
3GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic2.32E-06
4GO:0042780: tRNA 3'-end processing1.23E-05
5GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic1.23E-05
6GO:0000460: maturation of 5.8S rRNA2.77E-05
7GO:0000956: nuclear-transcribed mRNA catabolic process2.77E-05
8GO:0000470: maturation of LSU-rRNA4.74E-05
9GO:0033962: cytoplasmic mRNA processing body assembly5.85E-05
10GO:0000245: spliceosomal complex assembly5.85E-05
11GO:0006400: tRNA modification7.04E-05
12GO:0000387: spliceosomal snRNP assembly1.24E-04
13GO:0000027: ribosomal large subunit assembly2.54E-04
14GO:0007005: mitochondrion organization3.08E-04
15GO:0016049: cell growth6.76E-04
16GO:0048527: lateral root development7.68E-04
17GO:0042542: response to hydrogen peroxide9.32E-04
18GO:0009644: response to high light intensity1.01E-03
19GO:0009793: embryo development ending in seed dormancy1.68E-03
20GO:0009723: response to ethylene3.09E-03
21GO:0032259: methylation4.10E-03
22GO:0009408: response to heat4.23E-03
23GO:0051301: cell division6.65E-03
24GO:0006511: ubiquitin-dependent protein catabolic process7.76E-03
25GO:0006979: response to oxidative stress1.03E-02
26GO:0009733: response to auxin1.11E-02
27GO:0016567: protein ubiquitination2.26E-02
28GO:0009651: response to salt stress2.43E-02
RankGO TermAdjusted P value
1GO:0042134: rRNA primary transcript binding2.32E-06
2GO:0043141: ATP-dependent 5'-3' DNA helicase activity6.50E-06
3GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters6.50E-06
4GO:0042781: 3'-tRNA processing endoribonuclease activity1.23E-05
5GO:0017070: U6 snRNA binding3.71E-05
6GO:0003678: DNA helicase activity1.10E-04
7GO:0008168: methyltransferase activity2.73E-03
8GO:0003824: catalytic activity1.10E-02
9GO:0004842: ubiquitin-protein transferase activity1.29E-02
10GO:0003676: nucleic acid binding2.81E-02
RankGO TermAdjusted P value
1GO:0005730: nucleolus2.21E-06
2GO:0097526: spliceosomal tri-snRNP complex3.71E-05
3GO:0030687: preribosome, large subunit precursor7.04E-05
4GO:0005688: U6 snRNP8.28E-05
5GO:0000932: P-body5.89E-04
6GO:0019005: SCF ubiquitin ligase complex6.99E-04
7GO:0005747: mitochondrial respiratory chain complex I1.32E-03
8GO:0005732: small nucleolar ribonucleoprotein complex1.54E-03
9GO:0046658: anchored component of plasma membrane2.52E-03
10GO:0031225: anchored component of membrane8.55E-03
11GO:0005774: vacuolar membrane2.48E-02
12GO:0005773: vacuole3.37E-02
13GO:0005829: cytosol4.26E-02
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Gene type



Gene DE type