Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G16500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006654: phosphatidic acid biosynthetic process0.00E+00
2GO:0005993: trehalose catabolic process0.00E+00
3GO:0080149: sucrose induced translational repression0.00E+00
4GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
5GO:0010407: non-classical arabinogalactan protein metabolic process0.00E+00
6GO:1903648: positive regulation of chlorophyll catabolic process1.44E-04
7GO:0000077: DNA damage checkpoint1.44E-04
8GO:0042350: GDP-L-fucose biosynthetic process1.44E-04
9GO:1990641: response to iron ion starvation1.44E-04
10GO:0099132: ATP hydrolysis coupled cation transmembrane transport1.44E-04
11GO:0015031: protein transport2.50E-04
12GO:0080151: positive regulation of salicylic acid mediated signaling pathway3.29E-04
13GO:0042853: L-alanine catabolic process3.29E-04
14GO:0040020: regulation of meiotic nuclear division3.29E-04
15GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex3.29E-04
16GO:0006101: citrate metabolic process3.29E-04
17GO:0051707: response to other organism4.36E-04
18GO:0042351: 'de novo' GDP-L-fucose biosynthetic process5.40E-04
19GO:0072661: protein targeting to plasma membrane5.40E-04
20GO:0006065: UDP-glucuronate biosynthetic process5.40E-04
21GO:0052546: cell wall pectin metabolic process5.40E-04
22GO:0055070: copper ion homeostasis7.73E-04
23GO:0055089: fatty acid homeostasis7.73E-04
24GO:0051639: actin filament network formation7.73E-04
25GO:0072334: UDP-galactose transmembrane transport7.73E-04
26GO:0009226: nucleotide-sugar biosynthetic process7.73E-04
27GO:0016192: vesicle-mediated transport8.61E-04
28GO:0051764: actin crosslink formation1.02E-03
29GO:1902584: positive regulation of response to water deprivation1.02E-03
30GO:0006621: protein retention in ER lumen1.02E-03
31GO:0033356: UDP-L-arabinose metabolic process1.02E-03
32GO:0006886: intracellular protein transport1.09E-03
33GO:0006623: protein targeting to vacuole1.16E-03
34GO:0006097: glyoxylate cycle1.29E-03
35GO:0045927: positive regulation of growth1.29E-03
36GO:0006777: Mo-molybdopterin cofactor biosynthetic process1.59E-03
37GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.59E-03
38GO:0034389: lipid particle organization1.91E-03
39GO:0017148: negative regulation of translation1.91E-03
40GO:0010044: response to aluminum ion2.24E-03
41GO:0080186: developmental vegetative growth2.24E-03
42GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.24E-03
43GO:0071669: plant-type cell wall organization or biogenesis2.24E-03
44GO:2000014: regulation of endosperm development2.24E-03
45GO:1900057: positive regulation of leaf senescence2.24E-03
46GO:0006605: protein targeting2.60E-03
47GO:0045010: actin nucleation2.60E-03
48GO:0006102: isocitrate metabolic process2.60E-03
49GO:0007155: cell adhesion2.60E-03
50GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.60E-03
51GO:0030968: endoplasmic reticulum unfolded protein response2.96E-03
52GO:0006002: fructose 6-phosphate metabolic process2.96E-03
53GO:0009738: abscisic acid-activated signaling pathway3.25E-03
54GO:0000902: cell morphogenesis3.35E-03
55GO:0007338: single fertilization3.35E-03
56GO:0010332: response to gamma radiation3.35E-03
57GO:0008202: steroid metabolic process3.76E-03
58GO:0090332: stomatal closure3.76E-03
59GO:0000103: sulfate assimilation4.18E-03
60GO:0009688: abscisic acid biosynthetic process4.18E-03
61GO:0045037: protein import into chloroplast stroma5.06E-03
62GO:0030036: actin cytoskeleton organization5.52E-03
63GO:0007015: actin filament organization6.00E-03
64GO:0034605: cellular response to heat6.00E-03
65GO:0070588: calcium ion transmembrane transport6.50E-03
66GO:0010053: root epidermal cell differentiation6.50E-03
67GO:0006636: unsaturated fatty acid biosynthetic process7.00E-03
68GO:0000162: tryptophan biosynthetic process7.00E-03
69GO:0051017: actin filament bundle assembly7.52E-03
70GO:0006289: nucleotide-excision repair7.52E-03
71GO:0030150: protein import into mitochondrial matrix7.52E-03
72GO:0007275: multicellular organism development8.34E-03
73GO:0006334: nucleosome assembly8.61E-03
74GO:0019915: lipid storage8.61E-03
75GO:0009411: response to UV9.75E-03
76GO:0010584: pollen exine formation1.03E-02
77GO:0010118: stomatal movement1.16E-02
78GO:0006662: glycerol ether metabolic process1.22E-02
79GO:0010182: sugar mediated signaling pathway1.22E-02
80GO:0009960: endosperm development1.22E-02
81GO:0006891: intra-Golgi vesicle-mediated transport1.41E-02
82GO:0016032: viral process1.48E-02
83GO:0008380: RNA splicing1.49E-02
84GO:0009567: double fertilization forming a zygote and endosperm1.62E-02
85GO:0071805: potassium ion transmembrane transport1.69E-02
86GO:0051607: defense response to virus1.76E-02
87GO:0001666: response to hypoxia1.84E-02
88GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.91E-02
89GO:0009816: defense response to bacterium, incompatible interaction1.91E-02
90GO:0006906: vesicle fusion1.99E-02
91GO:0006457: protein folding2.10E-02
92GO:0030244: cellulose biosynthetic process2.22E-02
93GO:0006511: ubiquitin-dependent protein catabolic process2.23E-02
94GO:0048767: root hair elongation2.30E-02
95GO:0009832: plant-type cell wall biogenesis2.30E-02
96GO:0006499: N-terminal protein myristoylation2.38E-02
97GO:0000724: double-strand break repair via homologous recombination2.54E-02
98GO:0034599: cellular response to oxidative stress2.71E-02
99GO:0006099: tricarboxylic acid cycle2.71E-02
100GO:0006887: exocytosis2.97E-02
101GO:0006631: fatty acid metabolic process2.97E-02
102GO:0010114: response to red light3.15E-02
103GO:0009744: response to sucrose3.15E-02
104GO:0000209: protein polyubiquitination3.23E-02
105GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.60E-02
106GO:0009846: pollen germination3.70E-02
107GO:0006486: protein glycosylation3.89E-02
108GO:0006813: potassium ion transport3.89E-02
109GO:0051603: proteolysis involved in cellular protein catabolic process3.98E-02
110GO:0010224: response to UV-B3.98E-02
111GO:0006096: glycolytic process4.38E-02
112GO:0009553: embryo sac development4.89E-02
RankGO TermAdjusted P value
1GO:0005046: KDEL sequence binding0.00E+00
2GO:0061133: endopeptidase activator activity0.00E+00
3GO:0034338: short-chain carboxylesterase activity0.00E+00
4GO:0004555: alpha,alpha-trehalase activity0.00E+00
5GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity0.00E+00
6GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
7GO:0008320: protein transmembrane transporter activity7.70E-05
8GO:0009000: selenocysteine lyase activity1.44E-04
9GO:0050577: GDP-L-fucose synthase activity1.44E-04
10GO:0015927: trehalase activity1.44E-04
11GO:0030942: endoplasmic reticulum signal peptide binding1.44E-04
12GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity1.44E-04
13GO:0003994: aconitate hydratase activity3.29E-04
14GO:0000774: adenyl-nucleotide exchange factor activity3.29E-04
15GO:0032934: sterol binding3.29E-04
16GO:0052691: UDP-arabinopyranose mutase activity3.29E-04
17GO:0048531: beta-1,3-galactosyltransferase activity3.29E-04
18GO:0003979: UDP-glucose 6-dehydrogenase activity5.40E-04
19GO:0008265: Mo-molybdopterin cofactor sulfurase activity5.40E-04
20GO:0000975: regulatory region DNA binding5.40E-04
21GO:0005460: UDP-glucose transmembrane transporter activity7.73E-04
22GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity7.73E-04
23GO:0035529: NADH pyrophosphatase activity7.73E-04
24GO:0004834: tryptophan synthase activity1.02E-03
25GO:0046923: ER retention sequence binding1.02E-03
26GO:0016866: intramolecular transferase activity1.02E-03
27GO:0070628: proteasome binding1.02E-03
28GO:0047631: ADP-ribose diphosphatase activity1.29E-03
29GO:0030151: molybdenum ion binding1.29E-03
30GO:0005459: UDP-galactose transmembrane transporter activity1.29E-03
31GO:0045300: acyl-[acyl-carrier-protein] desaturase activity1.29E-03
32GO:0004623: phospholipase A2 activity1.29E-03
33GO:0030170: pyridoxal phosphate binding1.48E-03
34GO:0000210: NAD+ diphosphatase activity1.59E-03
35GO:0004656: procollagen-proline 4-dioxygenase activity1.91E-03
36GO:0003872: 6-phosphofructokinase activity2.24E-03
37GO:0008312: 7S RNA binding2.60E-03
38GO:0008142: oxysterol binding2.96E-03
39GO:0051287: NAD binding4.54E-03
40GO:0008378: galactosyltransferase activity5.06E-03
41GO:0005388: calcium-transporting ATPase activity5.52E-03
42GO:0004175: endopeptidase activity6.00E-03
43GO:0003712: transcription cofactor activity6.50E-03
44GO:0031418: L-ascorbic acid binding7.52E-03
45GO:0043130: ubiquitin binding7.52E-03
46GO:0051087: chaperone binding8.06E-03
47GO:0015079: potassium ion transmembrane transporter activity8.06E-03
48GO:0004298: threonine-type endopeptidase activity8.61E-03
49GO:0016760: cellulose synthase (UDP-forming) activity9.75E-03
50GO:0008565: protein transporter activity1.08E-02
51GO:0047134: protein-disulfide reductase activity1.09E-02
52GO:0005102: receptor binding1.09E-02
53GO:0004791: thioredoxin-disulfide reductase activity1.28E-02
54GO:0016853: isomerase activity1.28E-02
55GO:0050662: coenzyme binding1.28E-02
56GO:0004872: receptor activity1.35E-02
57GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.55E-02
58GO:0051015: actin filament binding1.55E-02
59GO:0004806: triglyceride lipase activity2.06E-02
60GO:0030247: polysaccharide binding2.06E-02
61GO:0005507: copper ion binding2.36E-02
62GO:0004222: metalloendopeptidase activity2.38E-02
63GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.63E-02
64GO:0003746: translation elongation factor activity2.63E-02
65GO:0000149: SNARE binding2.80E-02
66GO:0051539: 4 iron, 4 sulfur cluster binding2.88E-02
67GO:0042803: protein homodimerization activity3.00E-02
68GO:0005484: SNAP receptor activity3.15E-02
69GO:0005509: calcium ion binding3.31E-02
70GO:0051537: 2 iron, 2 sulfur cluster binding3.33E-02
71GO:0046872: metal ion binding3.91E-02
72GO:0022857: transmembrane transporter activity4.78E-02
73GO:0051082: unfolded protein binding4.99E-02
RankGO TermAdjusted P value
1GO:0005801: cis-Golgi network5.74E-05
2GO:0000138: Golgi trans cisterna1.44E-04
3GO:0001405: presequence translocase-associated import motor1.44E-04
4GO:0030665: clathrin-coated vesicle membrane1.84E-04
5GO:0017119: Golgi transport complex2.18E-04
6GO:0030134: ER to Golgi transport vesicle3.29E-04
7GO:0005789: endoplasmic reticulum membrane3.87E-04
8GO:0031902: late endosome membrane3.92E-04
9GO:0005795: Golgi stack4.23E-04
10GO:0032432: actin filament bundle7.73E-04
11GO:0030658: transport vesicle membrane7.73E-04
12GO:0005794: Golgi apparatus1.02E-03
13GO:0016021: integral component of membrane1.12E-03
14GO:0005945: 6-phosphofructokinase complex1.29E-03
15GO:0016272: prefoldin complex1.91E-03
16GO:0005885: Arp2/3 protein complex1.91E-03
17GO:0030173: integral component of Golgi membrane1.91E-03
18GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane2.24E-03
19GO:0005774: vacuolar membrane2.35E-03
20GO:0005786: signal recognition particle, endoplasmic reticulum targeting2.96E-03
21GO:0005811: lipid particle2.96E-03
22GO:0031901: early endosome membrane3.35E-03
23GO:0008540: proteasome regulatory particle, base subcomplex3.76E-03
24GO:0005783: endoplasmic reticulum3.88E-03
25GO:0008541: proteasome regulatory particle, lid subcomplex4.61E-03
26GO:0005884: actin filament4.61E-03
27GO:0000502: proteasome complex5.05E-03
28GO:0030176: integral component of endoplasmic reticulum membrane6.50E-03
29GO:0005839: proteasome core complex8.61E-03
30GO:0005887: integral component of plasma membrane1.08E-02
31GO:0009504: cell plate1.35E-02
32GO:0000139: Golgi membrane1.57E-02
33GO:0032580: Golgi cisterna membrane1.62E-02
34GO:0005829: cytosol1.81E-02
35GO:0000325: plant-type vacuole2.46E-02
36GO:0031201: SNARE complex2.97E-02
37GO:0005768: endosome3.21E-02
38GO:0005681: spliceosomal complex4.38E-02
39GO:0016607: nuclear speck4.48E-02
40GO:0005834: heterotrimeric G-protein complex4.58E-02
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Gene type



Gene DE type