co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G15545

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098586: cellular response to virus	0.00E+00
2	GO:0010203: response to very low fluence red light stimulus	0.00E+00
3	GO:0017009: protein-phycocyanobilin linkage	0.00E+00
4	GO:0051503: adenine nucleotide transport	0.00E+00
5	GO:0015969: guanosine tetraphosphate metabolic process	3.37E-05
6	GO:0042547: cell wall modification involved in multidimensional cell growth	3.37E-05
7	GO:0015798: myo-inositol transport	3.37E-05
8	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	3.37E-05
9	GO:0043087: regulation of GTPase activity	3.37E-05
10	GO:0048508: embryonic meristem development	3.37E-05
11	GO:0090351: seedling development	5.51E-05
12	GO:0046741: transport of virus in host, tissue to tissue	8.48E-05
13	GO:0009945: radial axis specification	8.48E-05
14	GO:0006435: threonyl-tRNA aminoacylation	8.48E-05
15	GO:0043255: regulation of carbohydrate biosynthetic process	8.48E-05
16	GO:0000256: allantoin catabolic process	8.48E-05
17	GO:2000082: regulation of L-ascorbic acid biosynthetic process	1.47E-04
18	GO:0010136: ureide catabolic process	1.47E-04
19	GO:0017006: protein-tetrapyrrole linkage	1.47E-04
20	GO:0009584: detection of visible light	2.18E-04
21	GO:0046902: regulation of mitochondrial membrane permeability	2.18E-04
22	GO:0006145: purine nucleobase catabolic process	2.18E-04
23	GO:0043572: plastid fission	2.18E-04
24	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.18E-04
25	GO:0051322: anaphase	2.95E-04
26	GO:0006183: GTP biosynthetic process	2.95E-04
27	GO:0006552: leucine catabolic process	2.95E-04
28	GO:0071483: cellular response to blue light	2.95E-04
29	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.63E-04
30	GO:0050665: hydrogen peroxide biosynthetic process	4.63E-04
31	GO:0009612: response to mechanical stimulus	5.53E-04
32	GO:0017148: negative regulation of translation	5.53E-04
33	GO:0009942: longitudinal axis specification	5.53E-04
34	GO:0009854: oxidative photosynthetic carbon pathway	5.53E-04
35	GO:0009645: response to low light intensity stimulus	6.47E-04
36	GO:0022904: respiratory electron transport chain	6.47E-04
37	GO:0010161: red light signaling pathway	6.47E-04
38	GO:0009585: red, far-red light phototransduction	7.87E-04
39	GO:0009932: cell tip growth	8.45E-04
40	GO:0071482: cellular response to light stimulus	8.45E-04
41	GO:0009808: lignin metabolic process	8.45E-04
42	GO:0046685: response to arsenic-containing substance	9.49E-04
43	GO:0009821: alkaloid biosynthetic process	9.49E-04
44	GO:0090305: nucleic acid phosphodiester bond hydrolysis	9.49E-04
45	GO:0000373: Group II intron splicing	9.49E-04
46	GO:0009638: phototropism	1.06E-03
47	GO:0010215: cellulose microfibril organization	1.17E-03
48	GO:0006352: DNA-templated transcription, initiation	1.28E-03
49	GO:0010152: pollen maturation	1.40E-03
50	GO:0009058: biosynthetic process	1.43E-03
51	GO:0009767: photosynthetic electron transport chain	1.52E-03
52	GO:0010020: chloroplast fission	1.65E-03
53	GO:0009825: multidimensional cell growth	1.78E-03
54	GO:0055085: transmembrane transport	1.78E-03
55	GO:0009833: plant-type primary cell wall biogenesis	1.91E-03
56	GO:0006833: water transport	1.91E-03
57	GO:0051302: regulation of cell division	2.19E-03
58	GO:0010073: meristem maintenance	2.19E-03
59	GO:0006825: copper ion transport	2.19E-03
60	GO:0051260: protein homooligomerization	2.33E-03
61	GO:0006730: one-carbon metabolic process	2.48E-03
62	GO:0009814: defense response, incompatible interaction	2.48E-03
63	GO:0031348: negative regulation of defense response	2.48E-03
64	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.94E-03
65	GO:0048653: anther development	3.09E-03
66	GO:0034220: ion transmembrane transport	3.09E-03
67	GO:0071555: cell wall organization	3.22E-03
68	GO:0007059: chromosome segregation	3.42E-03
69	GO:0009646: response to absence of light	3.42E-03
70	GO:0007018: microtubule-based movement	3.42E-03
71	GO:0000302: response to reactive oxygen species	3.76E-03
72	GO:0016032: viral process	3.93E-03
73	GO:0009630: gravitropism	3.93E-03
74	GO:0019760: glucosinolate metabolic process	4.28E-03
75	GO:0000910: cytokinesis	4.64E-03
76	GO:0016126: sterol biosynthetic process	4.83E-03
77	GO:0006810: transport	5.23E-03
78	GO:0010411: xyloglucan metabolic process	5.40E-03
79	GO:0030244: cellulose biosynthetic process	5.79E-03
80	GO:0018298: protein-chromophore linkage	5.79E-03
81	GO:0009834: plant-type secondary cell wall biogenesis	6.20E-03
82	GO:0010218: response to far red light	6.20E-03
83	GO:0009853: photorespiration	6.82E-03
84	GO:0045087: innate immune response	6.82E-03
85	GO:0009640: photomorphogenesis	8.14E-03
86	GO:0042546: cell wall biogenesis	8.37E-03
87	GO:0009793: embryo development ending in seed dormancy	9.31E-03
88	GO:0009846: pollen germination	9.54E-03
89	GO:0009809: lignin biosynthetic process	1.00E-02
90	GO:0048316: seed development	1.15E-02
91	GO:0048367: shoot system development	1.15E-02
92	GO:0006508: proteolysis	1.33E-02
93	GO:0009414: response to water deprivation	1.82E-02
94	GO:0045490: pectin catabolic process	1.89E-02
95	GO:0007166: cell surface receptor signaling pathway	2.08E-02
96	GO:0009826: unidimensional cell growth	2.51E-02
97	GO:0009658: chloroplast organization	2.58E-02
98	GO:0042254: ribosome biogenesis	2.62E-02
99	GO:0007049: cell cycle	2.79E-02
100	GO:0006952: defense response	2.81E-02
101	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.08E-02
102	GO:0046777: protein autophosphorylation	3.16E-02
103	GO:0055114: oxidation-reduction process	3.24E-02
104	GO:0009737: response to abscisic acid	3.97E-02
105	GO:0048364: root development	4.10E-02
106	GO:0006397: mRNA processing	4.10E-02
107	GO:0009753: response to jasmonic acid	4.18E-02
108	GO:0006468: protein phosphorylation	4.24E-02
109	GO:0009873: ethylene-activated signaling pathway	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
2	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
3	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
4	GO:0048039: ubiquinone binding	0.00E+00
5	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
6	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
7	GO:0004008: copper-exporting ATPase activity	3.37E-05
8	GO:0031516: far-red light photoreceptor activity	3.37E-05
9	GO:0003938: IMP dehydrogenase activity	8.48E-05
10	GO:0004829: threonine-tRNA ligase activity	8.48E-05
11	GO:0008728: GTP diphosphokinase activity	8.48E-05
12	GO:0005366: myo-inositol:proton symporter activity	8.48E-05
13	GO:0009883: red or far-red light photoreceptor activity	8.48E-05
14	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.48E-05
15	GO:0004180: carboxypeptidase activity	1.47E-04
16	GO:0008020: G-protein coupled photoreceptor activity	1.47E-04
17	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.18E-04
18	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.18E-04
19	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.18E-04
20	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.95E-04
21	GO:0016987: sigma factor activity	2.95E-04
22	GO:0004506: squalene monooxygenase activity	2.95E-04
23	GO:0008891: glycolate oxidase activity	2.95E-04
24	GO:0001053: plastid sigma factor activity	2.95E-04
25	GO:0005471: ATP:ADP antiporter activity	3.77E-04
26	GO:0009927: histidine phosphotransfer kinase activity	5.53E-04
27	GO:0043022: ribosome binding	7.44E-04
28	GO:0005375: copper ion transmembrane transporter activity	8.45E-04
29	GO:0016844: strictosidine synthase activity	1.06E-03
30	GO:0004673: protein histidine kinase activity	1.17E-03
31	GO:0016829: lyase activity	1.47E-03
32	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.52E-03
33	GO:0000155: phosphorelay sensor kinase activity	1.52E-03
34	GO:0004190: aspartic-type endopeptidase activity	1.78E-03
35	GO:0008017: microtubule binding	1.94E-03
36	GO:0042802: identical protein binding	2.35E-03
37	GO:0016779: nucleotidyltransferase activity	2.48E-03
38	GO:0030570: pectate lyase activity	2.63E-03
39	GO:0016760: cellulose synthase (UDP-forming) activity	2.63E-03
40	GO:0010181: FMN binding	3.42E-03
41	GO:0048038: quinone binding	3.76E-03
42	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.76E-03
43	GO:0004518: nuclease activity	3.93E-03
44	GO:0016759: cellulose synthase activity	4.28E-03
45	GO:0004871: signal transducer activity	4.41E-03
46	GO:0042803: protein homodimerization activity	4.41E-03
47	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.46E-03
48	GO:0015250: water channel activity	4.83E-03
49	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.40E-03
50	GO:0008236: serine-type peptidase activity	5.60E-03
51	GO:0005096: GTPase activator activity	5.99E-03
52	GO:0051539: 4 iron, 4 sulfur cluster binding	7.47E-03
53	GO:0035091: phosphatidylinositol binding	8.60E-03
54	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.00E-02
55	GO:0003777: microtubule motor activity	1.08E-02
56	GO:0005525: GTP binding	1.52E-02
57	GO:0015144: carbohydrate transmembrane transporter activity	1.71E-02
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.80E-02
59	GO:0005351: sugar:proton symporter activity	1.86E-02
60	GO:0005515: protein binding	2.35E-02
61	GO:0016491: oxidoreductase activity	2.46E-02
62	GO:0016788: hydrolase activity, acting on ester bonds	2.62E-02
63	GO:0004672: protein kinase activity	2.75E-02
64	GO:0003729: mRNA binding	2.78E-02
65	GO:0050660: flavin adenine dinucleotide binding	2.87E-02
66	GO:0008233: peptidase activity	2.97E-02
67	GO:0005524: ATP binding	3.05E-02
68	GO:0052689: carboxylic ester hydrolase activity	3.23E-02
69	GO:0009055: electron carrier activity	4.18E-02
70	GO:0046872: metal ion binding	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0046658: anchored component of plasma membrane	1.40E-05
4	GO:0009574: preprophase band	4.16E-05
5	GO:0016328: lateral plasma membrane	1.47E-04
6	GO:0009897: external side of plasma membrane	1.47E-04
7	GO:0030660: Golgi-associated vesicle membrane	2.95E-04
8	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.95E-04
9	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	7.44E-04
10	GO:0031305: integral component of mitochondrial inner membrane	7.44E-04
11	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.49E-04
12	GO:0016604: nuclear body	1.06E-03
13	GO:0005740: mitochondrial envelope	1.17E-03
14	GO:0005765: lysosomal membrane	1.28E-03
15	GO:0005773: vacuole	1.56E-03
16	GO:0031225: anchored component of membrane	2.31E-03
17	GO:0005871: kinesin complex	2.94E-03
18	GO:0005874: microtubule	3.41E-03
19	GO:0048046: apoplast	3.73E-03
20	GO:0009505: plant-type cell wall	4.28E-03
21	GO:0030529: intracellular ribonucleoprotein complex	4.83E-03
22	GO:0019005: SCF ubiquitin ligase complex	5.79E-03
23	GO:0009707: chloroplast outer membrane	5.79E-03
24	GO:0005887: integral component of plasma membrane	7.03E-03
25	GO:0009507: chloroplast	7.17E-03
26	GO:0009506: plasmodesma	7.71E-03
27	GO:0005777: peroxisome	1.06E-02
28	GO:0010008: endosome membrane	1.15E-02
29	GO:0016607: nuclear speck	1.15E-02
30	GO:0005834: heterotrimeric G-protein complex	1.18E-02
31	GO:0009524: phragmoplast	1.56E-02
32	GO:0005768: endosome	1.68E-02
33	GO:0005759: mitochondrial matrix	1.77E-02
34	GO:0005618: cell wall	1.84E-02
35	GO:0009705: plant-type vacuole membrane	1.89E-02
36	GO:0005886: plasma membrane	1.96E-02
37	GO:0009536: plastid	2.29E-02
38	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.76E-02
39	GO:0016020: membrane	3.20E-02
40	GO:0009570: chloroplast stroma	3.46E-02
41	GO:0005783: endoplasmic reticulum	3.74E-02
42	GO:0005743: mitochondrial inner membrane	3.77E-02
43	GO:0009535: chloroplast thylakoid membrane	4.17E-02