Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G14550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061157: mRNA destabilization0.00E+00
2GO:0045014: negative regulation of transcription by glucose0.00E+00
3GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
4GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
5GO:0080127: fruit septum development0.00E+00
6GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
7GO:0006907: pinocytosis0.00E+00
8GO:0070125: mitochondrial translational elongation0.00E+00
9GO:0009733: response to auxin3.65E-07
10GO:0009734: auxin-activated signaling pathway9.16E-06
11GO:0043039: tRNA aminoacylation4.11E-05
12GO:0040008: regulation of growth1.13E-04
13GO:0046620: regulation of organ growth1.42E-04
14GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.31E-04
15GO:0000373: Group II intron splicing2.52E-04
16GO:0009686: gibberellin biosynthetic process2.85E-04
17GO:0048829: root cap development3.98E-04
18GO:0016131: brassinosteroid metabolic process6.21E-04
19GO:0048497: maintenance of floral organ identity6.21E-04
20GO:0010583: response to cyclopentenone7.45E-04
21GO:0015904: tetracycline transport1.01E-03
22GO:0034757: negative regulation of iron ion transport1.01E-03
23GO:0006434: seryl-tRNA aminoacylation1.01E-03
24GO:0000025: maltose catabolic process1.01E-03
25GO:0010726: positive regulation of hydrogen peroxide metabolic process1.01E-03
26GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process1.01E-03
27GO:0006438: valyl-tRNA aminoacylation1.01E-03
28GO:0046520: sphingoid biosynthetic process1.01E-03
29GO:0032958: inositol phosphate biosynthetic process1.01E-03
30GO:0010480: microsporocyte differentiation1.01E-03
31GO:0006351: transcription, DNA-templated1.10E-03
32GO:0030488: tRNA methylation1.13E-03
33GO:0009736: cytokinin-activated signaling pathway1.43E-03
34GO:0009658: chloroplast organization1.46E-03
35GO:0000105: histidine biosynthetic process1.80E-03
36GO:0000160: phosphorelay signal transduction system1.94E-03
37GO:2000123: positive regulation of stomatal complex development2.20E-03
38GO:0006741: NADP biosynthetic process2.20E-03
39GO:0061062: regulation of nematode larval development2.20E-03
40GO:0010271: regulation of chlorophyll catabolic process2.20E-03
41GO:0018026: peptidyl-lysine monomethylation2.20E-03
42GO:0071497: cellular response to freezing2.20E-03
43GO:0001736: establishment of planar polarity2.20E-03
44GO:0080009: mRNA methylation2.20E-03
45GO:0009786: regulation of asymmetric cell division2.20E-03
46GO:0031648: protein destabilization2.20E-03
47GO:0006355: regulation of transcription, DNA-templated2.33E-03
48GO:0006865: amino acid transport2.42E-03
49GO:0009741: response to brassinosteroid3.00E-03
50GO:0019674: NAD metabolic process3.65E-03
51GO:0045910: negative regulation of DNA recombination3.65E-03
52GO:0090506: axillary shoot meristem initiation3.65E-03
53GO:0033591: response to L-ascorbic acid3.65E-03
54GO:1902448: positive regulation of shade avoidance3.65E-03
55GO:0080117: secondary growth3.65E-03
56GO:0071398: cellular response to fatty acid3.65E-03
57GO:0048575: short-day photoperiodism, flowering3.65E-03
58GO:0009926: auxin polar transport3.84E-03
59GO:0005983: starch catabolic process4.92E-03
60GO:0006020: inositol metabolic process5.34E-03
61GO:0051513: regulation of monopolar cell growth5.34E-03
62GO:0051639: actin filament network formation5.34E-03
63GO:0034059: response to anoxia5.34E-03
64GO:0007276: gamete generation5.34E-03
65GO:0006424: glutamyl-tRNA aminoacylation5.34E-03
66GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity5.34E-03
67GO:1990019: protein storage vacuole organization5.34E-03
68GO:0010321: regulation of vegetative phase change5.34E-03
69GO:0019363: pyridine nucleotide biosynthetic process5.34E-03
70GO:0010371: regulation of gibberellin biosynthetic process5.34E-03
71GO:0010588: cotyledon vascular tissue pattern formation5.61E-03
72GO:2000012: regulation of auxin polar transport5.61E-03
73GO:0009725: response to hormone5.61E-03
74GO:0010020: chloroplast fission6.34E-03
75GO:0009887: animal organ morphogenesis6.34E-03
76GO:0051764: actin crosslink formation7.24E-03
77GO:0042274: ribosomal small subunit biogenesis7.24E-03
78GO:0009765: photosynthesis, light harvesting7.24E-03
79GO:2000038: regulation of stomatal complex development7.24E-03
80GO:0042991: transcription factor import into nucleus7.24E-03
81GO:0006021: inositol biosynthetic process7.24E-03
82GO:0009755: hormone-mediated signaling pathway7.24E-03
83GO:1901141: regulation of lignin biosynthetic process7.24E-03
84GO:0048629: trichome patterning7.24E-03
85GO:0006863: purine nucleobase transport7.97E-03
86GO:0051017: actin filament bundle assembly8.86E-03
87GO:0016123: xanthophyll biosynthetic process9.34E-03
88GO:0010438: cellular response to sulfur starvation9.34E-03
89GO:0080110: sporopollenin biosynthetic process9.34E-03
90GO:0010375: stomatal complex patterning9.34E-03
91GO:0009696: salicylic acid metabolic process9.34E-03
92GO:0016120: carotene biosynthetic process9.34E-03
93GO:0045487: gibberellin catabolic process9.34E-03
94GO:0009107: lipoate biosynthetic process9.34E-03
95GO:0009740: gibberellic acid mediated signaling pathway9.54E-03
96GO:0003333: amino acid transmembrane transport1.08E-02
97GO:0009959: negative gravitropism1.16E-02
98GO:0009913: epidermal cell differentiation1.16E-02
99GO:0010358: leaf shaping1.16E-02
100GO:1902456: regulation of stomatal opening1.16E-02
101GO:0016554: cytidine to uridine editing1.16E-02
102GO:0042793: transcription from plastid promoter1.16E-02
103GO:0048831: regulation of shoot system development1.16E-02
104GO:0003006: developmental process involved in reproduction1.16E-02
105GO:0018258: protein O-linked glycosylation via hydroxyproline1.16E-02
106GO:0010942: positive regulation of cell death1.16E-02
107GO:0010405: arabinogalactan protein metabolic process1.16E-02
108GO:0007005: mitochondrion organization1.18E-02
109GO:0071215: cellular response to abscisic acid stimulus1.29E-02
110GO:0042127: regulation of cell proliferation1.41E-02
111GO:0006694: steroid biosynthetic process1.41E-02
112GO:0048509: regulation of meristem development1.41E-02
113GO:2000033: regulation of seed dormancy process1.41E-02
114GO:0031930: mitochondria-nucleus signaling pathway1.41E-02
115GO:0009861: jasmonic acid and ethylene-dependent systemic resistance1.41E-02
116GO:0009826: unidimensional cell growth1.43E-02
117GO:0016042: lipid catabolic process1.49E-02
118GO:0010087: phloem or xylem histogenesis1.66E-02
119GO:1900056: negative regulation of leaf senescence1.68E-02
120GO:0030497: fatty acid elongation1.68E-02
121GO:0010098: suspensor development1.68E-02
122GO:0048437: floral organ development1.68E-02
123GO:0010444: guard mother cell differentiation1.68E-02
124GO:0030307: positive regulation of cell growth1.68E-02
125GO:0000082: G1/S transition of mitotic cell cycle1.68E-02
126GO:0009744: response to sucrose1.68E-02
127GO:0010161: red light signaling pathway1.68E-02
128GO:0010268: brassinosteroid homeostasis1.79E-02
129GO:0009958: positive gravitropism1.79E-02
130GO:0010182: sugar mediated signaling pathway1.79E-02
131GO:0009416: response to light stimulus1.90E-02
132GO:0006402: mRNA catabolic process1.96E-02
133GO:0010439: regulation of glucosinolate biosynthetic process1.96E-02
134GO:0009819: drought recovery1.96E-02
135GO:0009690: cytokinin metabolic process1.96E-02
136GO:0009704: de-etiolation1.96E-02
137GO:0042255: ribosome assembly1.96E-02
138GO:0006353: DNA-templated transcription, termination1.96E-02
139GO:2000070: regulation of response to water deprivation1.96E-02
140GO:0010492: maintenance of shoot apical meristem identity1.96E-02
141GO:0048825: cotyledon development2.07E-02
142GO:0071554: cell wall organization or biogenesis2.22E-02
143GO:0016132: brassinosteroid biosynthetic process2.22E-02
144GO:0010099: regulation of photomorphogenesis2.25E-02
145GO:0007186: G-protein coupled receptor signaling pathway2.25E-02
146GO:0010100: negative regulation of photomorphogenesis2.25E-02
147GO:0010497: plasmodesmata-mediated intercellular transport2.25E-02
148GO:0032544: plastid translation2.25E-02
149GO:0009664: plant-type cell wall organization2.25E-02
150GO:0032502: developmental process2.37E-02
151GO:0051865: protein autoubiquitination2.56E-02
152GO:0048507: meristem development2.56E-02
153GO:0006783: heme biosynthetic process2.56E-02
154GO:0048589: developmental growth2.56E-02
155GO:0009056: catabolic process2.56E-02
156GO:0000902: cell morphogenesis2.56E-02
157GO:0009828: plant-type cell wall loosening2.69E-02
158GO:0009909: regulation of flower development2.80E-02
159GO:0009739: response to gibberellin2.83E-02
160GO:0009638: phototropism2.89E-02
161GO:0006779: porphyrin-containing compound biosynthetic process2.89E-02
162GO:0009098: leucine biosynthetic process2.89E-02
163GO:1900865: chloroplast RNA modification2.89E-02
164GO:0031425: chloroplast RNA processing2.89E-02
165GO:0006470: protein dephosphorylation2.92E-02
166GO:0048316: seed development3.16E-02
167GO:0009793: embryo development ending in seed dormancy3.17E-02
168GO:0010027: thylakoid membrane organization3.21E-02
169GO:0006949: syncytium formation3.22E-02
170GO:0010162: seed dormancy process3.22E-02
171GO:0009299: mRNA transcription3.22E-02
172GO:0009870: defense response signaling pathway, resistance gene-dependent3.22E-02
173GO:0006782: protoporphyrinogen IX biosynthetic process3.22E-02
174GO:0009641: shade avoidance3.22E-02
175GO:0006298: mismatch repair3.22E-02
176GO:0016441: posttranscriptional gene silencing3.22E-02
177GO:0006468: protein phosphorylation3.24E-02
178GO:0010029: regulation of seed germination3.40E-02
179GO:0009073: aromatic amino acid family biosynthetic process3.58E-02
180GO:0009682: induced systemic resistance3.58E-02
181GO:0008285: negative regulation of cell proliferation3.58E-02
182GO:0009750: response to fructose3.58E-02
183GO:0048229: gametophyte development3.58E-02
184GO:0048765: root hair cell differentiation3.58E-02
185GO:0015995: chlorophyll biosynthetic process3.78E-02
186GO:0048573: photoperiodism, flowering3.78E-02
187GO:0009624: response to nematode3.83E-02
188GO:0006790: sulfur compound metabolic process3.94E-02
189GO:0012501: programmed cell death3.94E-02
190GO:0010152: pollen maturation3.94E-02
191GO:0010105: negative regulation of ethylene-activated signaling pathway3.94E-02
192GO:0045037: protein import into chloroplast stroma3.94E-02
193GO:0010582: floral meristem determinacy3.94E-02
194GO:0007275: multicellular organism development4.11E-02
195GO:0048481: plant ovule development4.19E-02
196GO:0009817: defense response to fungus, incompatible interaction4.19E-02
197GO:0009767: photosynthetic electron transport chain4.31E-02
198GO:0030048: actin filament-based movement4.31E-02
199GO:0010628: positive regulation of gene expression4.31E-02
200GO:0009785: blue light signaling pathway4.31E-02
201GO:0006006: glucose metabolic process4.31E-02
202GO:0009691: cytokinin biosynthetic process4.31E-02
203GO:2000028: regulation of photoperiodism, flowering4.31E-02
204GO:0010075: regulation of meristem growth4.31E-02
205GO:0010311: lateral root formation4.40E-02
206GO:0006302: double-strand break repair4.70E-02
207GO:0048467: gynoecium development4.70E-02
208GO:0010207: photosystem II assembly4.70E-02
209GO:0010223: secondary shoot formation4.70E-02
210GO:0009934: regulation of meristem structural organization4.70E-02
211GO:0007165: signal transduction4.72E-02
RankGO TermAdjusted P value
1GO:0052834: inositol monophosphate phosphatase activity0.00E+00
2GO:0071633: dihydroceramidase activity0.00E+00
3GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
4GO:0045435: lycopene epsilon cyclase activity0.00E+00
5GO:0047661: amino-acid racemase activity0.00E+00
6GO:0004401: histidinol-phosphatase activity0.00E+00
7GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
8GO:0009899: ent-kaurene synthase activity0.00E+00
9GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
10GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity0.00E+00
11GO:0008805: carbon-monoxide oxygenase activity4.11E-05
12GO:0001872: (1->3)-beta-D-glucan binding2.55E-04
13GO:0010011: auxin binding4.20E-04
14GO:0080030: methyl indole-3-acetate esterase activity8.57E-04
15GO:0000170: sphingosine hydroxylase activity1.01E-03
16GO:0050139: nicotinate-N-glucosyltransferase activity1.01E-03
17GO:0000829: inositol heptakisphosphate kinase activity1.01E-03
18GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.01E-03
19GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.01E-03
20GO:0005227: calcium activated cation channel activity1.01E-03
21GO:0004828: serine-tRNA ligase activity1.01E-03
22GO:0004134: 4-alpha-glucanotransferase activity1.01E-03
23GO:0004818: glutamate-tRNA ligase activity1.01E-03
24GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity1.01E-03
25GO:0000828: inositol hexakisphosphate kinase activity1.01E-03
26GO:0008395: steroid hydroxylase activity1.01E-03
27GO:0004832: valine-tRNA ligase activity1.01E-03
28GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.01E-03
29GO:0052381: tRNA dimethylallyltransferase activity1.01E-03
30GO:0010313: phytochrome binding1.01E-03
31GO:0042736: NADH kinase activity1.01E-03
32GO:0033857: diphosphoinositol-pentakisphosphate kinase activity1.01E-03
33GO:0010347: L-galactose-1-phosphate phosphatase activity1.01E-03
34GO:0010012: steroid 22-alpha hydroxylase activity1.01E-03
35GO:0005345: purine nucleobase transmembrane transporter activity1.39E-03
36GO:0010296: prenylcysteine methylesterase activity2.20E-03
37GO:0016415: octanoyltransferase activity2.20E-03
38GO:0052832: inositol monophosphate 3-phosphatase activity2.20E-03
39GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity2.20E-03
40GO:0042284: sphingolipid delta-4 desaturase activity2.20E-03
41GO:0019156: isoamylase activity2.20E-03
42GO:0008934: inositol monophosphate 1-phosphatase activity2.20E-03
43GO:0008493: tetracycline transporter activity2.20E-03
44GO:0052833: inositol monophosphate 4-phosphatase activity2.20E-03
45GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity2.20E-03
46GO:0050736: O-malonyltransferase activity2.20E-03
47GO:0009884: cytokinin receptor activity2.20E-03
48GO:0017118: lipoyltransferase activity2.20E-03
49GO:0003852: 2-isopropylmalate synthase activity2.20E-03
50GO:0045543: gibberellin 2-beta-dioxygenase activity2.20E-03
51GO:0043425: bHLH transcription factor binding2.20E-03
52GO:0003700: transcription factor activity, sequence-specific DNA binding2.29E-03
53GO:0005034: osmosensor activity3.65E-03
54GO:0004722: protein serine/threonine phosphatase activity4.30E-03
55GO:0043621: protein self-association4.34E-03
56GO:0000156: phosphorelay response regulator activity4.67E-03
57GO:0051015: actin filament binding4.67E-03
58GO:0016788: hydrolase activity, acting on ester bonds5.00E-03
59GO:0045544: gibberellin 20-oxidase activity5.34E-03
60GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity5.34E-03
61GO:0080031: methyl salicylate esterase activity5.34E-03
62GO:0015171: amino acid transmembrane transporter activity7.12E-03
63GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed7.24E-03
64GO:0010328: auxin influx transmembrane transporter activity7.24E-03
65GO:0019199: transmembrane receptor protein kinase activity7.24E-03
66GO:0016279: protein-lysine N-methyltransferase activity7.24E-03
67GO:0008725: DNA-3-methyladenine glycosylase activity9.34E-03
68GO:0004523: RNA-DNA hybrid ribonuclease activity9.34E-03
69GO:0070696: transmembrane receptor protein serine/threonine kinase binding9.34E-03
70GO:0033612: receptor serine/threonine kinase binding1.08E-02
71GO:0008408: 3'-5' exonuclease activity1.08E-02
72GO:0004871: signal transducer activity1.15E-02
73GO:0030983: mismatched DNA binding1.16E-02
74GO:1990714: hydroxyproline O-galactosyltransferase activity1.16E-02
75GO:0004709: MAP kinase kinase kinase activity1.16E-02
76GO:0004556: alpha-amylase activity1.16E-02
77GO:0004674: protein serine/threonine kinase activity1.23E-02
78GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.41E-02
79GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.41E-02
80GO:0016832: aldehyde-lyase activity1.41E-02
81GO:0043565: sequence-specific DNA binding1.41E-02
82GO:0003886: DNA (cytosine-5-)-methyltransferase activity1.41E-02
83GO:0019900: kinase binding1.41E-02
84GO:0003727: single-stranded RNA binding1.41E-02
85GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.53E-02
86GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity1.79E-02
87GO:0004519: endonuclease activity1.85E-02
88GO:0016853: isomerase activity1.93E-02
89GO:0050662: coenzyme binding1.93E-02
90GO:0003677: DNA binding2.05E-02
91GO:0003724: RNA helicase activity2.25E-02
92GO:0003951: NAD+ kinase activity2.25E-02
93GO:0008173: RNA methyltransferase activity2.25E-02
94GO:0004518: nuclease activity2.37E-02
95GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity2.56E-02
96GO:0016298: lipase activity2.57E-02
97GO:0052689: carboxylic ester hydrolase activity2.61E-02
98GO:0016413: O-acetyltransferase activity3.03E-02
99GO:0004673: protein histidine kinase activity3.22E-02
100GO:0004805: trehalose-phosphatase activity3.22E-02
101GO:0042802: identical protein binding3.41E-02
102GO:0003779: actin binding3.69E-02
103GO:0030247: polysaccharide binding3.78E-02
104GO:0000049: tRNA binding3.94E-02
105GO:0003725: double-stranded RNA binding4.31E-02
106GO:0000155: phosphorelay sensor kinase activity4.31E-02
107GO:0005096: GTPase activator activity4.40E-02
108GO:0003774: motor activity4.70E-02
109GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.70E-02
110GO:0009055: electron carrier activity4.73E-02
111GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.83E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
3GO:0000791: euchromatin1.01E-03
4GO:0009986: cell surface1.44E-03
5GO:0000427: plastid-encoded plastid RNA polymerase complex2.20E-03
6GO:0031357: integral component of chloroplast inner membrane2.20E-03
7GO:0009569: chloroplast starch grain2.20E-03
8GO:0030870: Mre11 complex2.20E-03
9GO:0010494: cytoplasmic stress granule2.66E-03
10GO:0019897: extrinsic component of plasma membrane3.65E-03
11GO:0030139: endocytic vesicle3.65E-03
12GO:0005884: actin filament4.29E-03
13GO:0032585: multivesicular body membrane5.34E-03
14GO:0032432: actin filament bundle5.34E-03
15GO:0009531: secondary cell wall5.34E-03
16GO:0009544: chloroplast ATP synthase complex7.24E-03
17GO:0009507: chloroplast9.28E-03
18GO:0000795: synaptonemal complex9.34E-03
19GO:0009654: photosystem II oxygen evolving complex9.80E-03
20GO:0005886: plasma membrane1.05E-02
21GO:0046658: anchored component of plasma membrane1.16E-02
22GO:0015629: actin cytoskeleton1.29E-02
23GO:0009501: amyloplast1.96E-02
24GO:0019898: extrinsic component of membrane2.07E-02
25GO:0016459: myosin complex3.22E-02
26GO:0090404: pollen tube tip3.58E-02
27GO:0009508: plastid chromosome4.31E-02
28GO:0005578: proteinaceous extracellular matrix4.31E-02
29GO:0030095: chloroplast photosystem II4.70E-02
<
Gene type



Gene DE type