co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G13840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032212: positive regulation of telomere maintenance via telomerase	0.00E+00
2	GO:0032206: positive regulation of telomere maintenance	0.00E+00
3	GO:0070125: mitochondrial translational elongation	0.00E+00
4	GO:0090706: specification of plant organ position	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:0009733: response to auxin	1.56E-10
7	GO:0009734: auxin-activated signaling pathway	2.38E-07
8	GO:0046620: regulation of organ growth	2.41E-06
9	GO:0009926: auxin polar transport	3.62E-06
10	GO:0010158: abaxial cell fate specification	4.22E-05
11	GO:0051013: microtubule severing	1.86E-04
12	GO:0010450: inflorescence meristem growth	1.86E-04
13	GO:0048829: root cap development	3.16E-04
14	GO:0061062: regulation of nematode larval development	4.19E-04
15	GO:0001736: establishment of planar polarity	4.19E-04
16	GO:0009786: regulation of asymmetric cell division	4.19E-04
17	GO:2000123: positive regulation of stomatal complex development	4.19E-04
18	GO:0010024: phytochromobilin biosynthetic process	4.19E-04
19	GO:0040008: regulation of growth	4.81E-04
20	GO:0080055: low-affinity nitrate transport	6.84E-04
21	GO:0045165: cell fate commitment	6.84E-04
22	GO:1902448: positive regulation of shade avoidance	6.84E-04
23	GO:0051513: regulation of monopolar cell growth	9.77E-04
24	GO:0007231: osmosensory signaling pathway	9.77E-04
25	GO:0051639: actin filament network formation	9.77E-04
26	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.06E-03
27	GO:0016117: carotenoid biosynthetic process	1.24E-03
28	GO:0033500: carbohydrate homeostasis	1.29E-03
29	GO:2000038: regulation of stomatal complex development	1.29E-03
30	GO:0051764: actin crosslink formation	1.29E-03
31	GO:0009765: photosynthesis, light harvesting	1.29E-03
32	GO:0009624: response to nematode	1.55E-03
33	GO:0080110: sporopollenin biosynthetic process	1.65E-03
34	GO:0010236: plastoquinone biosynthetic process	1.65E-03
35	GO:0048497: maintenance of floral organ identity	1.65E-03
36	GO:0009107: lipoate biosynthetic process	1.65E-03
37	GO:1902183: regulation of shoot apical meristem development	1.65E-03
38	GO:0016123: xanthophyll biosynthetic process	1.65E-03
39	GO:0010375: stomatal complex patterning	1.65E-03
40	GO:0016120: carotene biosynthetic process	1.65E-03
41	GO:0009913: epidermal cell differentiation	2.03E-03
42	GO:0009828: plant-type cell wall loosening	2.14E-03
43	GO:0009942: longitudinal axis specification	2.43E-03
44	GO:0030488: tRNA methylation	2.43E-03
45	GO:0010019: chloroplast-nucleus signaling pathway	2.43E-03
46	GO:0010050: vegetative phase change	2.87E-03
47	GO:0045490: pectin catabolic process	3.09E-03
48	GO:0009850: auxin metabolic process	3.32E-03
49	GO:0010311: lateral root formation	3.47E-03
50	GO:0007389: pattern specification process	3.80E-03
51	GO:0010093: specification of floral organ identity	3.80E-03
52	GO:0048574: long-day photoperiodism, flowering	3.80E-03
53	GO:2000024: regulation of leaf development	4.30E-03
54	GO:0006098: pentose-phosphate shunt	4.30E-03
55	GO:0005982: starch metabolic process	4.82E-03
56	GO:0006779: porphyrin-containing compound biosynthetic process	4.82E-03
57	GO:0000723: telomere maintenance	4.82E-03
58	GO:0007275: multicellular organism development	5.01E-03
59	GO:0006535: cysteine biosynthetic process from serine	5.36E-03
60	GO:0006949: syncytium formation	5.36E-03
61	GO:0006782: protoporphyrinogen IX biosynthetic process	5.36E-03
62	GO:0019538: protein metabolic process	5.36E-03
63	GO:0048765: root hair cell differentiation	5.92E-03
64	GO:0006816: calcium ion transport	5.92E-03
65	GO:0008285: negative regulation of cell proliferation	5.92E-03
66	GO:0005983: starch catabolic process	6.51E-03
67	GO:0045037: protein import into chloroplast stroma	6.51E-03
68	GO:0010582: floral meristem determinacy	6.51E-03
69	GO:0009664: plant-type cell wall organization	6.76E-03
70	GO:0009725: response to hormone	7.11E-03
71	GO:0006094: gluconeogenesis	7.11E-03
72	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.39E-03
73	GO:0009933: meristem structural organization	7.73E-03
74	GO:0070588: calcium ion transmembrane transport	8.37E-03
75	GO:0009825: multidimensional cell growth	8.37E-03
76	GO:0009944: polarity specification of adaxial/abaxial axis	9.71E-03
77	GO:0051017: actin filament bundle assembly	9.71E-03
78	GO:0019344: cysteine biosynthetic process	9.71E-03
79	GO:0007010: cytoskeleton organization	9.71E-03
80	GO:0043622: cortical microtubule organization	1.04E-02
81	GO:0003333: amino acid transmembrane transport	1.11E-02
82	GO:0035428: hexose transmembrane transport	1.19E-02
83	GO:0048364: root development	1.23E-02
84	GO:0010082: regulation of root meristem growth	1.26E-02
85	GO:0009294: DNA mediated transformation	1.26E-02
86	GO:0010091: trichome branching	1.34E-02
87	GO:0010584: pollen exine formation	1.34E-02
88	GO:0006284: base-excision repair	1.34E-02
89	GO:0000271: polysaccharide biosynthetic process	1.50E-02
90	GO:0000226: microtubule cytoskeleton organization	1.50E-02
91	GO:0009958: positive gravitropism	1.58E-02
92	GO:0046323: glucose import	1.58E-02
93	GO:0045489: pectin biosynthetic process	1.58E-02
94	GO:0010154: fruit development	1.58E-02
95	GO:0007018: microtubule-based movement	1.66E-02
96	GO:0071555: cell wall organization	1.73E-02
97	GO:0048825: cotyledon development	1.75E-02
98	GO:0010583: response to cyclopentenone	1.92E-02
99	GO:0009793: embryo development ending in seed dormancy	2.08E-02
100	GO:0006464: cellular protein modification process	2.10E-02
101	GO:0010252: auxin homeostasis	2.10E-02
102	GO:0007267: cell-cell signaling	2.19E-02
103	GO:0001666: response to hypoxia	2.38E-02
104	GO:0010411: xyloglucan metabolic process	2.67E-02
105	GO:0015995: chlorophyll biosynthetic process	2.67E-02
106	GO:0009826: unidimensional cell growth	2.68E-02
107	GO:0018298: protein-chromophore linkage	2.88E-02
108	GO:0009832: plant-type cell wall biogenesis	2.98E-02
109	GO:0000160: phosphorelay signal transduction system	2.98E-02
110	GO:0006865: amino acid transport	3.30E-02
111	GO:0016051: carbohydrate biosynthetic process	3.40E-02
112	GO:0006839: mitochondrial transport	3.74E-02
113	GO:0009744: response to sucrose	4.08E-02
114	GO:0042546: cell wall biogenesis	4.19E-02
115	GO:0006812: cation transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
2	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
3	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
4	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
5	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
6	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
7	GO:0001872: (1->3)-beta-D-glucan binding	1.41E-05
8	GO:0030570: pectate lyase activity	7.01E-05
9	GO:0008568: microtubule-severing ATPase activity	1.86E-04
10	GO:0019203: carbohydrate phosphatase activity	1.86E-04
11	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.86E-04
12	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.86E-04
13	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.86E-04
14	GO:0005227: calcium activated cation channel activity	1.86E-04
15	GO:0030247: polysaccharide binding	3.22E-04
16	GO:0050017: L-3-cyanoalanine synthase activity	4.19E-04
17	GO:0017118: lipoyltransferase activity	4.19E-04
18	GO:0016415: octanoyltransferase activity	4.19E-04
19	GO:0080054: low-affinity nitrate transmembrane transporter activity	6.84E-04
20	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	6.84E-04
21	GO:0003913: DNA photolyase activity	6.84E-04
22	GO:0043047: single-stranded telomeric DNA binding	9.77E-04
23	GO:0010011: auxin binding	1.29E-03
24	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.29E-03
25	GO:0010328: auxin influx transmembrane transporter activity	1.29E-03
26	GO:0019199: transmembrane receptor protein kinase activity	1.29E-03
27	GO:0005471: ATP:ADP antiporter activity	1.65E-03
28	GO:0008725: DNA-3-methyladenine glycosylase activity	1.65E-03
29	GO:0004332: fructose-bisphosphate aldolase activity	2.03E-03
30	GO:0016829: lyase activity	2.27E-03
31	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.30E-03
32	GO:0051753: mannan synthase activity	2.43E-03
33	GO:0004124: cysteine synthase activity	2.43E-03
34	GO:0042162: telomeric DNA binding	2.87E-03
35	GO:0009881: photoreceptor activity	2.87E-03
36	GO:0008017: microtubule binding	3.27E-03
37	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	4.30E-03
38	GO:0009672: auxin:proton symporter activity	4.82E-03
39	GO:0004161: dimethylallyltranstransferase activity	5.92E-03
40	GO:0005262: calcium channel activity	7.11E-03
41	GO:0004565: beta-galactosidase activity	7.11E-03
42	GO:0010329: auxin efflux transmembrane transporter activity	7.11E-03
43	GO:0008061: chitin binding	8.37E-03
44	GO:0008146: sulfotransferase activity	8.37E-03
45	GO:0051536: iron-sulfur cluster binding	9.71E-03
46	GO:0043424: protein histidine kinase binding	1.04E-02
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.19E-02
48	GO:0005355: glucose transmembrane transporter activity	1.66E-02
49	GO:0050662: coenzyme binding	1.66E-02
50	GO:0016853: isomerase activity	1.66E-02
51	GO:0010181: FMN binding	1.66E-02
52	GO:0004872: receptor activity	1.75E-02
53	GO:0019901: protein kinase binding	1.75E-02
54	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.83E-02
55	GO:0000156: phosphorelay response regulator activity	2.01E-02
56	GO:0051015: actin filament binding	2.01E-02
57	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.67E-02
58	GO:0004674: protein serine/threonine kinase activity	2.91E-02
59	GO:0050897: cobalt ion binding	3.19E-02
60	GO:0003746: translation elongation factor activity	3.40E-02
61	GO:0042803: protein homodimerization activity	4.31E-02
62	GO:0015293: symporter activity	4.43E-02

Rank	GO Term	Adjusted P value
1	GO:0009986: cell surface	1.15E-04
2	GO:0009507: chloroplast	2.57E-04
3	GO:0005697: telomerase holoenzyme complex	4.19E-04
4	GO:0030139: endocytic vesicle	6.84E-04
5	GO:0032585: multivesicular body membrane	9.77E-04
6	GO:0032432: actin filament bundle	9.77E-04
7	GO:0009570: chloroplast stroma	1.11E-03
8	GO:0009941: chloroplast envelope	3.66E-03
9	GO:0000784: nuclear chromosome, telomeric region	3.80E-03
10	GO:0005884: actin filament	5.92E-03
11	GO:0000311: plastid large ribosomal subunit	6.51E-03
12	GO:0005874: microtubule	6.77E-03
13	GO:0031969: chloroplast membrane	7.07E-03
14	GO:0005578: proteinaceous extracellular matrix	7.11E-03
15	GO:0030095: chloroplast photosystem II	7.73E-03
16	GO:0009654: photosystem II oxygen evolving complex	1.04E-02
17	GO:0009532: plastid stroma	1.11E-02
18	GO:0005886: plasma membrane	1.38E-02
19	GO:0005871: kinesin complex	1.42E-02
20	GO:0019898: extrinsic component of membrane	1.75E-02
21	GO:0046658: anchored component of plasma membrane	2.38E-02
22	GO:0009505: plant-type cell wall	2.42E-02
23	GO:0009534: chloroplast thylakoid	3.04E-02
24	GO:0015934: large ribosomal subunit	3.19E-02
25	GO:0031977: thylakoid lumen	3.85E-02
26	GO:0031225: anchored component of membrane	4.16E-02