co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0031222: arabinan catabolic process	0.00E+00
3	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
4	GO:0061157: mRNA destabilization	0.00E+00
5	GO:0002184: cytoplasmic translational termination	0.00E+00
6	GO:0017038: protein import	0.00E+00
7	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
8	GO:0019323: pentose catabolic process	0.00E+00
9	GO:0090706: specification of plant organ position	0.00E+00
10	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
11	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
12	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
13	GO:0080127: fruit septum development	0.00E+00
14	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
15	GO:0042407: cristae formation	0.00E+00
16	GO:0007638: mechanosensory behavior	0.00E+00
17	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
18	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
19	GO:0045184: establishment of protein localization	0.00E+00
20	GO:0009733: response to auxin	1.31E-06
21	GO:0009734: auxin-activated signaling pathway	4.40E-06
22	GO:0046620: regulation of organ growth	7.27E-06
23	GO:1900865: chloroplast RNA modification	2.63E-05
24	GO:0040008: regulation of growth	3.66E-05
25	GO:0009658: chloroplast organization	4.03E-05
26	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.00E-04
27	GO:0010020: chloroplast fission	1.08E-04
28	GO:0010497: plasmodesmata-mediated intercellular transport	2.45E-04
29	GO:0016556: mRNA modification	3.05E-04
30	GO:0046739: transport of virus in multicellular host	3.05E-04
31	GO:0015995: chlorophyll biosynthetic process	3.88E-04
32	GO:0048829: root cap development	4.98E-04
33	GO:0009793: embryo development ending in seed dormancy	7.01E-04
34	GO:0016123: xanthophyll biosynthetic process	7.34E-04
35	GO:0048497: maintenance of floral organ identity	7.34E-04
36	GO:0010207: photosystem II assembly	9.99E-04
37	GO:0042793: transcription from plastid promoter	1.01E-03
38	GO:0016554: cytidine to uridine editing	1.01E-03
39	GO:0051247: positive regulation of protein metabolic process	1.13E-03
40	GO:1902458: positive regulation of stomatal opening	1.13E-03
41	GO:0015904: tetracycline transport	1.13E-03
42	GO:2000905: negative regulation of starch metabolic process	1.13E-03
43	GO:0048363: mucilage pectin metabolic process	1.13E-03
44	GO:0010450: inflorescence meristem growth	1.13E-03
45	GO:0070509: calcium ion import	1.13E-03
46	GO:0042659: regulation of cell fate specification	1.13E-03
47	GO:0044262: cellular carbohydrate metabolic process	1.13E-03
48	GO:0000025: maltose catabolic process	1.13E-03
49	GO:0043266: regulation of potassium ion transport	1.13E-03
50	GO:0010442: guard cell morphogenesis	1.13E-03
51	GO:0010063: positive regulation of trichoblast fate specification	1.13E-03
52	GO:0010480: microsporocyte differentiation	1.13E-03
53	GO:0010080: regulation of floral meristem growth	1.13E-03
54	GO:0042759: long-chain fatty acid biosynthetic process	1.13E-03
55	GO:0005980: glycogen catabolic process	1.13E-03
56	GO:0030198: extracellular matrix organization	1.13E-03
57	GO:0006438: valyl-tRNA aminoacylation	1.13E-03
58	GO:0042371: vitamin K biosynthetic process	1.13E-03
59	GO:0090558: plant epidermis development	1.13E-03
60	GO:2000021: regulation of ion homeostasis	1.13E-03
61	GO:0035987: endodermal cell differentiation	1.13E-03
62	GO:0046520: sphingoid biosynthetic process	1.13E-03
63	GO:0009926: auxin polar transport	1.14E-03
64	GO:0042372: phylloquinone biosynthetic process	1.33E-03
65	GO:0030488: tRNA methylation	1.33E-03
66	GO:0010027: thylakoid membrane organization	1.55E-03
67	GO:0048437: floral organ development	1.71E-03
68	GO:2000070: regulation of response to water deprivation	2.14E-03
69	GO:0006423: cysteinyl-tRNA aminoacylation	2.48E-03
70	GO:1903426: regulation of reactive oxygen species biosynthetic process	2.48E-03
71	GO:0006568: tryptophan metabolic process	2.48E-03
72	GO:0010275: NAD(P)H dehydrogenase complex assembly	2.48E-03
73	GO:0019388: galactose catabolic process	2.48E-03
74	GO:0052541: plant-type cell wall cellulose metabolic process	2.48E-03
75	GO:1900871: chloroplast mRNA modification	2.48E-03
76	GO:0018026: peptidyl-lysine monomethylation	2.48E-03
77	GO:0060359: response to ammonium ion	2.48E-03
78	GO:0048255: mRNA stabilization	2.48E-03
79	GO:0071668: plant-type cell wall assembly	2.48E-03
80	GO:0001736: establishment of planar polarity	2.48E-03
81	GO:0080009: mRNA methylation	2.48E-03
82	GO:0009786: regulation of asymmetric cell division	2.48E-03
83	GO:0031648: protein destabilization	2.48E-03
84	GO:0001682: tRNA 5'-leader removal	2.48E-03
85	GO:0009451: RNA modification	2.98E-03
86	GO:0000373: Group II intron splicing	3.16E-03
87	GO:0048507: meristem development	3.16E-03
88	GO:0010305: leaf vascular tissue pattern formation	3.75E-03
89	GO:0009638: phototropism	3.75E-03
90	GO:0006779: porphyrin-containing compound biosynthetic process	3.75E-03
91	GO:0009098: leucine biosynthetic process	3.75E-03
92	GO:0010182: sugar mediated signaling pathway	3.75E-03
93	GO:0031425: chloroplast RNA processing	3.75E-03
94	GO:0009742: brassinosteroid mediated signaling pathway	4.06E-03
95	GO:0045165: cell fate commitment	4.12E-03
96	GO:0045910: negative regulation of DNA recombination	4.12E-03
97	GO:0048586: regulation of long-day photoperiodism, flowering	4.12E-03
98	GO:0033591: response to L-ascorbic acid	4.12E-03
99	GO:0090708: specification of plant organ axis polarity	4.12E-03
100	GO:1902448: positive regulation of shade avoidance	4.12E-03
101	GO:0080055: low-affinity nitrate transport	4.12E-03
102	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	4.12E-03
103	GO:0010022: meristem determinacy	4.12E-03
104	GO:0043157: response to cation stress	4.12E-03
105	GO:0009641: shade avoidance	4.40E-03
106	GO:0006782: protoporphyrinogen IX biosynthetic process	4.40E-03
107	GO:0032502: developmental process	5.37E-03
108	GO:0010582: floral meristem determinacy	5.86E-03
109	GO:0005983: starch catabolic process	5.86E-03
110	GO:0010371: regulation of gibberellin biosynthetic process	6.03E-03
111	GO:0010071: root meristem specification	6.03E-03
112	GO:0051513: regulation of monopolar cell growth	6.03E-03
113	GO:0007231: osmosensory signaling pathway	6.03E-03
114	GO:0009102: biotin biosynthetic process	6.03E-03
115	GO:0009052: pentose-phosphate shunt, non-oxidative branch	6.03E-03
116	GO:0009647: skotomorphogenesis	6.03E-03
117	GO:0051639: actin filament network formation	6.03E-03
118	GO:0034059: response to anoxia	6.03E-03
119	GO:0009590: detection of gravity	6.03E-03
120	GO:0019048: modulation by virus of host morphology or physiology	6.03E-03
121	GO:0043572: plastid fission	6.03E-03
122	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	6.03E-03
123	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	6.03E-03
124	GO:0031048: chromatin silencing by small RNA	6.03E-03
125	GO:1990019: protein storage vacuole organization	6.03E-03
126	GO:0009828: plant-type cell wall loosening	6.32E-03
127	GO:0009725: response to hormone	6.68E-03
128	GO:0010628: positive regulation of gene expression	6.68E-03
129	GO:0010588: cotyledon vascular tissue pattern formation	6.68E-03
130	GO:2000012: regulation of auxin polar transport	6.68E-03
131	GO:0006006: glucose metabolic process	6.68E-03
132	GO:0010102: lateral root morphogenesis	6.68E-03
133	GO:0009790: embryo development	7.18E-03
134	GO:0010109: regulation of photosynthesis	8.18E-03
135	GO:0030104: water homeostasis	8.18E-03
136	GO:0051764: actin crosslink formation	8.18E-03
137	GO:0042274: ribosomal small subunit biogenesis	8.18E-03
138	GO:0033500: carbohydrate homeostasis	8.18E-03
139	GO:0009765: photosynthesis, light harvesting	8.18E-03
140	GO:2000306: positive regulation of photomorphogenesis	8.18E-03
141	GO:0051567: histone H3-K9 methylation	8.18E-03
142	GO:0009755: hormone-mediated signaling pathway	8.18E-03
143	GO:0008295: spermidine biosynthetic process	8.18E-03
144	GO:0070588: calcium ion transmembrane transport	8.50E-03
145	GO:0006071: glycerol metabolic process	9.51E-03
146	GO:0010025: wax biosynthetic process	9.51E-03
147	GO:0045487: gibberellin catabolic process	1.06E-02
148	GO:1902183: regulation of shoot apical meristem development	1.06E-02
149	GO:0000304: response to singlet oxygen	1.06E-02
150	GO:0080110: sporopollenin biosynthetic process	1.06E-02
151	GO:0010438: cellular response to sulfur starvation	1.06E-02
152	GO:0010158: abaxial cell fate specification	1.06E-02
153	GO:0051017: actin filament bundle assembly	1.06E-02
154	GO:0010236: plastoquinone biosynthetic process	1.06E-02
155	GO:0045038: protein import into chloroplast thylakoid membrane	1.06E-02
156	GO:0016120: carotene biosynthetic process	1.06E-02
157	GO:0009416: response to light stimulus	1.12E-02
158	GO:0007166: cell surface receptor signaling pathway	1.22E-02
159	GO:0006351: transcription, DNA-templated	1.28E-02
160	GO:0003333: amino acid transmembrane transport	1.29E-02
161	GO:0000741: karyogamy	1.32E-02
162	GO:0009959: negative gravitropism	1.32E-02
163	GO:0009913: epidermal cell differentiation	1.32E-02
164	GO:0006655: phosphatidylglycerol biosynthetic process	1.32E-02
165	GO:1902456: regulation of stomatal opening	1.32E-02
166	GO:0033365: protein localization to organelle	1.32E-02
167	GO:0003006: developmental process involved in reproduction	1.32E-02
168	GO:0010358: leaf shaping	1.32E-02
169	GO:0016458: gene silencing	1.32E-02
170	GO:0032973: amino acid export	1.32E-02
171	GO:0010405: arabinogalactan protein metabolic process	1.32E-02
172	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.32E-02
173	GO:0006865: amino acid transport	1.43E-02
174	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.55E-02
175	GO:2000033: regulation of seed dormancy process	1.60E-02
176	GO:0031930: mitochondria-nucleus signaling pathway	1.60E-02
177	GO:0080086: stamen filament development	1.60E-02
178	GO:2000067: regulation of root morphogenesis	1.60E-02
179	GO:0071333: cellular response to glucose stimulus	1.60E-02
180	GO:0009082: branched-chain amino acid biosynthetic process	1.60E-02
181	GO:0006458: 'de novo' protein folding	1.60E-02
182	GO:0017148: negative regulation of translation	1.60E-02
183	GO:0009099: valine biosynthetic process	1.60E-02
184	GO:0042026: protein refolding	1.60E-02
185	GO:0005975: carbohydrate metabolic process	1.64E-02
186	GO:0007275: multicellular organism development	1.66E-02
187	GO:0006839: mitochondrial transport	1.80E-02
188	GO:0048528: post-embryonic root development	1.90E-02
189	GO:0009772: photosynthetic electron transport in photosystem II	1.90E-02
190	GO:0043090: amino acid import	1.90E-02
191	GO:0010098: suspensor development	1.90E-02
192	GO:1900056: negative regulation of leaf senescence	1.90E-02
193	GO:0030497: fatty acid elongation	1.90E-02
194	GO:0010444: guard mother cell differentiation	1.90E-02
195	GO:0006631: fatty acid metabolic process	1.90E-02
196	GO:0030307: positive regulation of cell growth	1.90E-02
197	GO:0015693: magnesium ion transport	1.90E-02
198	GO:0009826: unidimensional cell growth	1.93E-02
199	GO:0008033: tRNA processing	1.98E-02
200	GO:0016042: lipid catabolic process	2.08E-02
201	GO:0009640: photomorphogenesis	2.10E-02
202	GO:0009958: positive gravitropism	2.13E-02
203	GO:0010197: polar nucleus fusion	2.13E-02
204	GO:0010439: regulation of glucosinolate biosynthetic process	2.22E-02
205	GO:0001522: pseudouridine synthesis	2.22E-02
206	GO:0048564: photosystem I assembly	2.22E-02
207	GO:0009690: cytokinin metabolic process	2.22E-02
208	GO:0006605: protein targeting	2.22E-02
209	GO:0005978: glycogen biosynthetic process	2.22E-02
210	GO:0009819: drought recovery	2.22E-02
211	GO:0055075: potassium ion homeostasis	2.22E-02
212	GO:0000105: histidine biosynthetic process	2.22E-02
213	GO:0048544: recognition of pollen	2.30E-02
214	GO:0006397: mRNA processing	2.38E-02
215	GO:0071555: cell wall organization	2.53E-02
216	GO:0010093: specification of floral organ identity	2.55E-02
217	GO:0015996: chlorophyll catabolic process	2.55E-02
218	GO:0009097: isoleucine biosynthetic process	2.55E-02
219	GO:0006526: arginine biosynthetic process	2.55E-02
220	GO:0032544: plastid translation	2.55E-02
221	GO:0007186: G-protein coupled receptor signaling pathway	2.55E-02
222	GO:0009657: plastid organization	2.55E-02
223	GO:0071554: cell wall organization or biogenesis	2.64E-02
224	GO:0048366: leaf development	2.71E-02
225	GO:0009664: plant-type cell wall organization	2.80E-02
226	GO:0010583: response to cyclopentenone	2.82E-02
227	GO:0016032: viral process	2.82E-02
228	GO:0009835: fruit ripening	2.91E-02
229	GO:0051865: protein autoubiquitination	2.91E-02
230	GO:0080144: amino acid homeostasis	2.91E-02
231	GO:2000024: regulation of leaf development	2.91E-02
232	GO:0046916: cellular transition metal ion homeostasis	2.91E-02
233	GO:0006098: pentose-phosphate shunt	2.91E-02
234	GO:0000902: cell morphogenesis	2.91E-02
235	GO:0010090: trichome morphogenesis	3.01E-02
236	GO:1901657: glycosyl compound metabolic process	3.01E-02
237	GO:0042761: very long-chain fatty acid biosynthetic process	3.27E-02
238	GO:2000280: regulation of root development	3.27E-02
239	GO:0043067: regulation of programmed cell death	3.27E-02
240	GO:0048354: mucilage biosynthetic process involved in seed coat development	3.27E-02
241	GO:0009909: regulation of flower development	3.48E-02
242	GO:0006468: protein phosphorylation	3.50E-02
243	GO:0051607: defense response to virus	3.61E-02
244	GO:0006298: mismatch repair	3.66E-02
245	GO:0016441: posttranscriptional gene silencing	3.66E-02
246	GO:0006949: syncytium formation	3.66E-02
247	GO:0010629: negative regulation of gene expression	3.66E-02
248	GO:0009299: mRNA transcription	3.66E-02
249	GO:0010162: seed dormancy process	3.66E-02
250	GO:0030422: production of siRNA involved in RNA interference	3.66E-02
251	GO:0045036: protein targeting to chloroplast	3.66E-02
252	GO:0006415: translational termination	4.05E-02
253	GO:0009073: aromatic amino acid family biosynthetic process	4.05E-02
254	GO:0006816: calcium ion transport	4.05E-02
255	GO:0009773: photosynthetic electron transport in photosystem I	4.05E-02
256	GO:0009682: induced systemic resistance	4.05E-02
257	GO:0048229: gametophyte development	4.05E-02
258	GO:0048765: root hair cell differentiation	4.05E-02
259	GO:0045892: negative regulation of transcription, DNA-templated	4.09E-02
260	GO:0012501: programmed cell death	4.47E-02
261	GO:0010105: negative regulation of ethylene-activated signaling pathway	4.47E-02
262	GO:0016024: CDP-diacylglycerol biosynthetic process	4.47E-02
263	GO:0045037: protein import into chloroplast stroma	4.47E-02
264	GO:0009624: response to nematode	4.74E-02
265	GO:0010075: regulation of meristem growth	4.89E-02
266	GO:0009691: cytokinin biosynthetic process	4.89E-02
267	GO:0006094: gluconeogenesis	4.89E-02
268	GO:0009767: photosynthetic electron transport chain	4.89E-02
269	GO:0030048: actin filament-based movement	4.89E-02
270	GO:0009785: blue light signaling pathway	4.89E-02
271	GO:0050826: response to freezing	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0015267: channel activity	0.00E+00
2	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
3	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
4	GO:0005201: extracellular matrix structural constituent	0.00E+00
5	GO:0004076: biotin synthase activity	0.00E+00
6	GO:0071633: dihydroceramidase activity	0.00E+00
7	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
8	GO:0047661: amino-acid racemase activity	0.00E+00
9	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
10	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
11	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
12	GO:0004519: endonuclease activity	1.23E-04
13	GO:0001872: (1->3)-beta-D-glucan binding	3.05E-04
14	GO:0043023: ribosomal large subunit binding	3.05E-04
15	GO:0003723: RNA binding	6.22E-04
16	GO:0052381: tRNA dimethylallyltransferase activity	1.13E-03
17	GO:0010012: steroid 22-alpha hydroxylase activity	1.13E-03
18	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	1.13E-03
19	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.13E-03
20	GO:0000170: sphingosine hydroxylase activity	1.13E-03
21	GO:0050139: nicotinate-N-glucosyltransferase activity	1.13E-03
22	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.13E-03
23	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.13E-03
24	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.13E-03
25	GO:0005227: calcium activated cation channel activity	1.13E-03
26	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.13E-03
27	GO:0004134: 4-alpha-glucanotransferase activity	1.13E-03
28	GO:0004645: phosphorylase activity	1.13E-03
29	GO:0009374: biotin binding	1.13E-03
30	GO:0008184: glycogen phosphorylase activity	1.13E-03
31	GO:0019203: carbohydrate phosphatase activity	1.13E-03
32	GO:0004832: valine-tRNA ligase activity	1.13E-03
33	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	1.13E-03
34	GO:0050308: sugar-phosphatase activity	1.13E-03
35	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	1.13E-03
36	GO:0005528: FK506 binding	1.52E-03
37	GO:0004176: ATP-dependent peptidase activity	1.97E-03
38	GO:0003852: 2-isopropylmalate synthase activity	2.48E-03
39	GO:0045543: gibberellin 2-beta-dioxygenase activity	2.48E-03
40	GO:0043425: bHLH transcription factor binding	2.48E-03
41	GO:0004766: spermidine synthase activity	2.48E-03
42	GO:0016630: protochlorophyllide reductase activity	2.48E-03
43	GO:0004817: cysteine-tRNA ligase activity	2.48E-03
44	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.48E-03
45	GO:0004750: ribulose-phosphate 3-epimerase activity	2.48E-03
46	GO:0004614: phosphoglucomutase activity	2.48E-03
47	GO:0008805: carbon-monoxide oxygenase activity	2.48E-03
48	GO:0042284: sphingolipid delta-4 desaturase activity	2.48E-03
49	GO:0008493: tetracycline transporter activity	2.48E-03
50	GO:0017118: lipoyltransferase activity	2.48E-03
51	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	2.48E-03
52	GO:0004222: metalloendopeptidase activity	2.73E-03
53	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.16E-03
54	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.12E-03
55	GO:0080054: low-affinity nitrate transmembrane transporter activity	4.12E-03
56	GO:0015462: ATPase-coupled protein transmembrane transporter activity	4.12E-03
57	GO:0004180: carboxypeptidase activity	4.12E-03
58	GO:0005504: fatty acid binding	4.12E-03
59	GO:0070330: aromatase activity	4.12E-03
60	GO:0003913: DNA photolyase activity	4.12E-03
61	GO:0016805: dipeptidase activity	4.12E-03
62	GO:0043621: protein self-association	5.66E-03
63	GO:0035197: siRNA binding	6.03E-03
64	GO:0016851: magnesium chelatase activity	6.03E-03
65	GO:0052655: L-valine transaminase activity	6.03E-03
66	GO:0016149: translation release factor activity, codon specific	6.03E-03
67	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	6.03E-03
68	GO:0052656: L-isoleucine transaminase activity	6.03E-03
69	GO:0052654: L-leucine transaminase activity	6.03E-03
70	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.36E-03
71	GO:0031072: heat shock protein binding	6.68E-03
72	GO:0005262: calcium channel activity	6.68E-03
73	GO:0008237: metallopeptidase activity	6.83E-03
74	GO:0008266: poly(U) RNA binding	7.56E-03
75	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.56E-03
76	GO:0010011: auxin binding	8.18E-03
77	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	8.18E-03
78	GO:0045430: chalcone isomerase activity	8.18E-03
79	GO:0010328: auxin influx transmembrane transporter activity	8.18E-03
80	GO:0004084: branched-chain-amino-acid transaminase activity	8.18E-03
81	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	8.18E-03
82	GO:0046556: alpha-L-arabinofuranosidase activity	8.18E-03
83	GO:0019199: transmembrane receptor protein kinase activity	8.18E-03
84	GO:0004659: prenyltransferase activity	8.18E-03
85	GO:0016279: protein-lysine N-methyltransferase activity	8.18E-03
86	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.52E-03
87	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.87E-03
88	GO:0015171: amino acid transmembrane transporter activity	9.29E-03
89	GO:0003989: acetyl-CoA carboxylase activity	1.06E-02
90	GO:0008725: DNA-3-methyladenine glycosylase activity	1.06E-02
91	GO:0018685: alkane 1-monooxygenase activity	1.06E-02
92	GO:2001070: starch binding	1.32E-02
93	GO:0030983: mismatched DNA binding	1.32E-02
94	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.32E-02
95	GO:0004332: fructose-bisphosphate aldolase activity	1.32E-02
96	GO:0004526: ribonuclease P activity	1.32E-02
97	GO:0004709: MAP kinase kinase kinase activity	1.32E-02
98	GO:0016208: AMP binding	1.32E-02
99	GO:0051082: unfolded protein binding	1.36E-02
100	GO:0051753: mannan synthase activity	1.60E-02
101	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.60E-02
102	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.60E-02
103	GO:0016832: aldehyde-lyase activity	1.60E-02
104	GO:0003727: single-stranded RNA binding	1.68E-02
105	GO:0009881: photoreceptor activity	1.90E-02
106	GO:0001085: RNA polymerase II transcription factor binding	2.13E-02
107	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	2.22E-02
108	GO:0009055: electron carrier activity	2.51E-02
109	GO:0003724: RNA helicase activity	2.55E-02
110	GO:0046914: transition metal ion binding	2.55E-02
111	GO:0008173: RNA methyltransferase activity	2.55E-02
112	GO:0003747: translation release factor activity	2.91E-02
113	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.91E-02
114	GO:0000156: phosphorelay response regulator activity	3.01E-02
115	GO:0051015: actin filament binding	3.01E-02
116	GO:0016298: lipase activity	3.20E-02
117	GO:0052689: carboxylic ester hydrolase activity	3.50E-02
118	GO:0016413: O-acetyltransferase activity	3.61E-02
119	GO:0004805: trehalose-phosphatase activity	3.66E-02
120	GO:0044183: protein binding involved in protein folding	4.05E-02
121	GO:0047372: acylglycerol lipase activity	4.05E-02
122	GO:0008289: lipid binding	4.06E-02
123	GO:0004650: polygalacturonase activity	4.24E-02
124	GO:0004871: signal transducer activity	4.31E-02
125	GO:0004521: endoribonuclease activity	4.47E-02
126	GO:0030247: polysaccharide binding	4.50E-02
127	GO:0102483: scopolin beta-glucosidase activity	4.50E-02
128	GO:0009982: pseudouridine synthase activity	4.89E-02
129	GO:0003725: double-stranded RNA binding	4.89E-02
130	GO:0015266: protein channel activity	4.89E-02
131	GO:0015095: magnesium ion transmembrane transporter activity	4.89E-02
132	GO:0046983: protein dimerization activity	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0009507: chloroplast	7.00E-20
3	GO:0009570: chloroplast stroma	1.75E-11
4	GO:0009941: chloroplast envelope	2.88E-10
5	GO:0009534: chloroplast thylakoid	1.99E-06
6	GO:0046658: anchored component of plasma membrane	2.18E-05
7	GO:0009508: plastid chromosome	8.57E-05
8	GO:0005886: plasma membrane	8.55E-04
9	GO:0031225: anchored component of membrane	9.49E-04
10	GO:0031969: chloroplast membrane	1.12E-03
11	GO:0010319: stromule	1.29E-03
12	GO:0009295: nucleoid	1.29E-03
13	GO:0009986: cell surface	1.71E-03
14	GO:0009532: plastid stroma	1.97E-03
15	GO:0000427: plastid-encoded plastid RNA polymerase complex	2.48E-03
16	GO:0031357: integral component of chloroplast inner membrane	2.48E-03
17	GO:0009535: chloroplast thylakoid membrane	2.84E-03
18	GO:0009317: acetyl-CoA carboxylase complex	4.12E-03
19	GO:0009528: plastid inner membrane	4.12E-03
20	GO:0019897: extrinsic component of plasma membrane	4.12E-03
21	GO:0010007: magnesium chelatase complex	4.12E-03
22	GO:0030139: endocytic vesicle	4.12E-03
23	GO:0009543: chloroplast thylakoid lumen	5.46E-03
24	GO:0005719: nuclear euchromatin	6.03E-03
25	GO:0032585: multivesicular body membrane	6.03E-03
26	GO:0032432: actin filament bundle	6.03E-03
27	GO:0005578: proteinaceous extracellular matrix	6.68E-03
28	GO:0030529: intracellular ribonucleoprotein complex	7.95E-03
29	GO:0009527: plastid outer membrane	8.18E-03
30	GO:0009544: chloroplast ATP synthase complex	8.18E-03
31	GO:0009536: plastid	9.03E-03
32	GO:0009654: photosystem II oxygen evolving complex	1.17E-02
33	GO:0015629: actin cytoskeleton	1.55E-02
34	GO:0009533: chloroplast stromal thylakoid	1.90E-02
35	GO:0042807: central vacuole	1.90E-02
36	GO:0009501: amyloplast	2.22E-02
37	GO:0048226: Casparian strip	2.22E-02
38	GO:0019898: extrinsic component of membrane	2.47E-02
39	GO:0000326: protein storage vacuole	2.55E-02
40	GO:0010494: cytoplasmic stress granule	2.91E-02
41	GO:0015030: Cajal body	3.27E-02
42	GO:0000418: DNA-directed RNA polymerase IV complex	3.66E-02
43	GO:0016459: myosin complex	3.66E-02
44	GO:0009579: thylakoid	3.90E-02
45	GO:0005884: actin filament	4.05E-02
46	GO:0090404: pollen tube tip	4.05E-02
47	GO:0005667: transcription factor complex	4.27E-02
48	GO:0000311: plastid large ribosomal subunit	4.47E-02
49	GO:0009707: chloroplast outer membrane	4.98E-02
50	GO:0005743: mitochondrial inner membrane	4.98E-02