co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12900

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042820: vitamin B6 catabolic process	0.00E+00
2	GO:0051924: regulation of calcium ion transport	0.00E+00
3	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
6	GO:0042407: cristae formation	0.00E+00
7	GO:0042821: pyridoxal biosynthetic process	0.00E+00
8	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
9	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
10	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
11	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
12	GO:1905157: positive regulation of photosynthesis	0.00E+00
13	GO:0009069: serine family amino acid metabolic process	0.00E+00
14	GO:0097275: cellular ammonia homeostasis	0.00E+00
15	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
16	GO:0002184: cytoplasmic translational termination	0.00E+00
17	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
18	GO:0000476: maturation of 4.5S rRNA	0.00E+00
19	GO:0000967: rRNA 5'-end processing	0.00E+00
20	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
21	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
22	GO:0017038: protein import	0.00E+00
23	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
24	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
25	GO:0070178: D-serine metabolic process	0.00E+00
26	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
27	GO:1901259: chloroplast rRNA processing	4.25E-09
28	GO:0015979: photosynthesis	1.96E-08
29	GO:0009658: chloroplast organization	2.78E-07
30	GO:0009773: photosynthetic electron transport in photosystem I	3.51E-07
31	GO:0015995: chlorophyll biosynthetic process	5.46E-07
32	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.63E-06
33	GO:1902326: positive regulation of chlorophyll biosynthetic process	2.25E-05
34	GO:0034470: ncRNA processing	2.25E-05
35	GO:0032544: plastid translation	9.43E-05
36	GO:0009657: plastid organization	9.43E-05
37	GO:0046739: transport of virus in multicellular host	1.51E-04
38	GO:0006021: inositol biosynthetic process	2.54E-04
39	GO:0019252: starch biosynthetic process	2.75E-04
40	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.30E-04
41	GO:0010190: cytochrome b6f complex assembly	5.30E-04
42	GO:0010027: thylakoid membrane organization	5.59E-04
43	GO:0042026: protein refolding	7.00E-04
44	GO:0009955: adaxial/abaxial pattern specification	7.00E-04
45	GO:0042372: phylloquinone biosynthetic process	7.00E-04
46	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	7.28E-04
47	GO:0080112: seed growth	7.28E-04
48	GO:0005980: glycogen catabolic process	7.28E-04
49	GO:0030198: extracellular matrix organization	7.28E-04
50	GO:1904966: positive regulation of vitamin E biosynthetic process	7.28E-04
51	GO:0010063: positive regulation of trichoblast fate specification	7.28E-04
52	GO:0006659: phosphatidylserine biosynthetic process	7.28E-04
53	GO:1904964: positive regulation of phytol biosynthetic process	7.28E-04
54	GO:0042371: vitamin K biosynthetic process	7.28E-04
55	GO:0043686: co-translational protein modification	7.28E-04
56	GO:0043007: maintenance of rDNA	7.28E-04
57	GO:0034337: RNA folding	7.28E-04
58	GO:0005991: trehalose metabolic process	7.28E-04
59	GO:0009443: pyridoxal 5'-phosphate salvage	7.28E-04
60	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	7.28E-04
61	GO:1905039: carboxylic acid transmembrane transport	7.28E-04
62	GO:1905200: gibberellic acid transmembrane transport	7.28E-04
63	GO:0006418: tRNA aminoacylation for protein translation	7.50E-04
64	GO:0048437: floral organ development	8.94E-04
65	GO:0009772: photosynthetic electron transport in photosystem II	8.94E-04
66	GO:0046620: regulation of organ growth	1.11E-03
67	GO:0006353: DNA-templated transcription, termination	1.11E-03
68	GO:0010497: plasmodesmata-mediated intercellular transport	1.35E-03
69	GO:0018026: peptidyl-lysine monomethylation	1.57E-03
70	GO:1904143: positive regulation of carotenoid biosynthetic process	1.57E-03
71	GO:0034755: iron ion transmembrane transport	1.57E-03
72	GO:0006423: cysteinyl-tRNA aminoacylation	1.57E-03
73	GO:0006568: tryptophan metabolic process	1.57E-03
74	GO:0010024: phytochromobilin biosynthetic process	1.57E-03
75	GO:0031425: chloroplast RNA processing	1.92E-03
76	GO:0006782: protoporphyrinogen IX biosynthetic process	2.25E-03
77	GO:0032502: developmental process	2.27E-03
78	GO:1901657: glycosyl compound metabolic process	2.47E-03
79	GO:0034051: negative regulation of plant-type hypersensitive response	2.60E-03
80	GO:0006788: heme oxidation	2.60E-03
81	GO:0006696: ergosterol biosynthetic process	2.60E-03
82	GO:0005977: glycogen metabolic process	2.60E-03
83	GO:0006954: inflammatory response	2.60E-03
84	GO:0019684: photosynthesis, light reaction	2.61E-03
85	GO:0005983: starch catabolic process	2.99E-03
86	GO:0010731: protein glutathionylation	3.78E-03
87	GO:0006168: adenine salvage	3.78E-03
88	GO:0043572: plastid fission	3.78E-03
89	GO:0016556: mRNA modification	3.78E-03
90	GO:0045338: farnesyl diphosphate metabolic process	3.78E-03
91	GO:0006166: purine ribonucleoside salvage	3.78E-03
92	GO:0010071: root meristem specification	3.78E-03
93	GO:0006020: inositol metabolic process	3.78E-03
94	GO:0071484: cellular response to light intensity	3.78E-03
95	GO:0009102: biotin biosynthetic process	3.78E-03
96	GO:0051085: chaperone mediated protein folding requiring cofactor	3.78E-03
97	GO:0009152: purine ribonucleotide biosynthetic process	3.78E-03
98	GO:0010601: positive regulation of auxin biosynthetic process	3.78E-03
99	GO:0046653: tetrahydrofolate metabolic process	3.78E-03
100	GO:0009052: pentose-phosphate shunt, non-oxidative branch	3.78E-03
101	GO:0010207: photosystem II assembly	3.85E-03
102	GO:0022622: root system development	5.10E-03
103	GO:0006221: pyrimidine nucleotide biosynthetic process	5.10E-03
104	GO:0010021: amylopectin biosynthetic process	5.10E-03
105	GO:0010109: regulation of photosynthesis	5.10E-03
106	GO:0010107: potassium ion import	5.10E-03
107	GO:0009765: photosynthesis, light harvesting	5.10E-03
108	GO:0015994: chlorophyll metabolic process	5.10E-03
109	GO:0006546: glycine catabolic process	5.10E-03
110	GO:0016042: lipid catabolic process	5.61E-03
111	GO:0009768: photosynthesis, light harvesting in photosystem I	5.92E-03
112	GO:0061077: chaperone-mediated protein folding	6.52E-03
113	GO:0032543: mitochondrial translation	6.57E-03
114	GO:0098719: sodium ion import across plasma membrane	6.57E-03
115	GO:0006564: L-serine biosynthetic process	6.57E-03
116	GO:0010236: plastoquinone biosynthetic process	6.57E-03
117	GO:0031365: N-terminal protein amino acid modification	6.57E-03
118	GO:0044209: AMP salvage	6.57E-03
119	GO:0006730: one-carbon metabolic process	7.15E-03
120	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	8.16E-03
121	GO:0016554: cytidine to uridine editing	8.16E-03
122	GO:0009643: photosynthetic acclimation	8.16E-03
123	GO:0032973: amino acid export	8.16E-03
124	GO:0006563: L-serine metabolic process	8.16E-03
125	GO:0000741: karyogamy	8.16E-03
126	GO:0009228: thiamine biosynthetic process	8.16E-03
127	GO:0046855: inositol phosphate dephosphorylation	8.16E-03
128	GO:0006751: glutathione catabolic process	8.16E-03
129	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	8.16E-03
130	GO:1902456: regulation of stomatal opening	8.16E-03
131	GO:0042793: transcription from plastid promoter	8.16E-03
132	GO:0006458: 'de novo' protein folding	9.88E-03
133	GO:0017148: negative regulation of translation	9.88E-03
134	GO:0048280: vesicle fusion with Golgi apparatus	9.88E-03
135	GO:0080086: stamen filament development	9.88E-03
136	GO:0006662: glycerol ether metabolic process	1.08E-02
137	GO:0006855: drug transmembrane transport	1.08E-02
138	GO:0010197: polar nucleus fusion	1.08E-02
139	GO:0009958: positive gravitropism	1.08E-02
140	GO:0009646: response to absence of light	1.16E-02
141	GO:0009645: response to low light intensity stimulus	1.17E-02
142	GO:0009769: photosynthesis, light harvesting in photosystem II	1.17E-02
143	GO:0032880: regulation of protein localization	1.17E-02
144	GO:0043090: amino acid import	1.17E-02
145	GO:0006810: transport	1.24E-02
146	GO:0006364: rRNA processing	1.30E-02
147	GO:0005975: carbohydrate metabolic process	1.35E-02
148	GO:0006605: protein targeting	1.37E-02
149	GO:0010078: maintenance of root meristem identity	1.37E-02
150	GO:0042255: ribosome assembly	1.37E-02
151	GO:0070413: trehalose metabolism in response to stress	1.37E-02
152	GO:0055075: potassium ion homeostasis	1.37E-02
153	GO:0052543: callose deposition in cell wall	1.37E-02
154	GO:0007155: cell adhesion	1.37E-02
155	GO:0048564: photosystem I assembly	1.37E-02
156	GO:0043562: cellular response to nitrogen levels	1.57E-02
157	GO:0017004: cytochrome complex assembly	1.57E-02
158	GO:0071482: cellular response to light stimulus	1.57E-02
159	GO:0048367: shoot system development	1.68E-02
160	GO:0090333: regulation of stomatal closure	1.79E-02
161	GO:0046916: cellular transition metal ion homeostasis	1.79E-02
162	GO:0006783: heme biosynthetic process	1.79E-02
163	GO:0000902: cell morphogenesis	1.79E-02
164	GO:0009821: alkaloid biosynthetic process	1.79E-02
165	GO:0046685: response to arsenic-containing substance	1.79E-02
166	GO:0010206: photosystem II repair	1.79E-02
167	GO:0080144: amino acid homeostasis	1.79E-02
168	GO:0009416: response to light stimulus	1.81E-02
169	GO:0006397: mRNA processing	1.96E-02
170	GO:1900865: chloroplast RNA modification	2.01E-02
171	GO:0051453: regulation of intracellular pH	2.01E-02
172	GO:0005982: starch metabolic process	2.01E-02
173	GO:0009638: phototropism	2.01E-02
174	GO:0043067: regulation of programmed cell death	2.01E-02
175	GO:0006779: porphyrin-containing compound biosynthetic process	2.01E-02
176	GO:0009627: systemic acquired resistance	2.17E-02
177	GO:0006896: Golgi to vacuole transport	2.25E-02
178	GO:0045036: protein targeting to chloroplast	2.25E-02
179	GO:0009641: shade avoidance	2.25E-02
180	GO:0009073: aromatic amino acid family biosynthetic process	2.49E-02
181	GO:0006879: cellular iron ion homeostasis	2.49E-02
182	GO:0018119: peptidyl-cysteine S-nitrosylation	2.49E-02
183	GO:0015770: sucrose transport	2.49E-02
184	GO:0006415: translational termination	2.49E-02
185	GO:0009684: indoleacetic acid biosynthetic process	2.49E-02
186	GO:0010015: root morphogenesis	2.49E-02
187	GO:0009089: lysine biosynthetic process via diaminopimelate	2.49E-02
188	GO:0009817: defense response to fungus, incompatible interaction	2.54E-02
189	GO:0018298: protein-chromophore linkage	2.54E-02
190	GO:0048481: plant ovule development	2.54E-02
191	GO:0055114: oxidation-reduction process	2.54E-02
192	GO:0016024: CDP-diacylglycerol biosynthetic process	2.75E-02
193	GO:0006790: sulfur compound metabolic process	2.75E-02
194	GO:0048366: leaf development	2.77E-02
195	GO:0048527: lateral root development	2.94E-02
196	GO:0010588: cotyledon vascular tissue pattern formation	3.01E-02
197	GO:2000012: regulation of auxin polar transport	3.01E-02
198	GO:0010628: positive regulation of gene expression	3.01E-02
199	GO:0010102: lateral root morphogenesis	3.01E-02
200	GO:0009767: photosynthetic electron transport chain	3.01E-02
201	GO:0030048: actin filament-based movement	3.01E-02
202	GO:0010020: chloroplast fission	3.28E-02
203	GO:0010223: secondary shoot formation	3.28E-02
204	GO:0009266: response to temperature stimulus	3.28E-02
205	GO:0048467: gynoecium development	3.28E-02
206	GO:0010143: cutin biosynthetic process	3.28E-02
207	GO:0009790: embryo development	3.29E-02
208	GO:0034599: cellular response to oxidative stress	3.36E-02
209	GO:0009901: anther dehiscence	3.56E-02
210	GO:0010030: positive regulation of seed germination	3.56E-02
211	GO:0046854: phosphatidylinositol phosphorylation	3.56E-02
212	GO:0019853: L-ascorbic acid biosynthetic process	3.56E-02
213	GO:0006413: translational initiation	3.71E-02
214	GO:0009735: response to cytokinin	4.10E-02
215	GO:0010114: response to red light	4.14E-02
216	GO:0005992: trehalose biosynthetic process	4.14E-02
217	GO:0051707: response to other organism	4.14E-02
218	GO:0080147: root hair cell development	4.14E-02
219	GO:0016114: terpenoid biosynthetic process	4.75E-02
220	GO:0019915: lipid storage	4.75E-02
221	GO:0009269: response to desiccation	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0010303: limit dextrinase activity	0.00E+00
2	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
3	GO:0004823: leucine-tRNA ligase activity	0.00E+00
4	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
5	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
6	GO:0030378: serine racemase activity	0.00E+00
7	GO:0003941: L-serine ammonia-lyase activity	0.00E+00
8	GO:0051060: pullulanase activity	0.00E+00
9	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
10	GO:0008721: D-serine ammonia-lyase activity	0.00E+00
11	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
12	GO:0005201: extracellular matrix structural constituent	0.00E+00
13	GO:0004076: biotin synthase activity	0.00E+00
14	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
15	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
16	GO:0090711: FMN hydrolase activity	0.00E+00
17	GO:0016851: magnesium chelatase activity	1.63E-06
18	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.59E-06
19	GO:0019843: rRNA binding	6.98E-05
20	GO:0002161: aminoacyl-tRNA editing activity	7.27E-05
21	GO:0043023: ribosomal large subunit binding	1.51E-04
22	GO:0009011: starch synthase activity	2.54E-04
23	GO:0004556: alpha-amylase activity	5.30E-04
24	GO:0005528: FK506 binding	6.60E-04
25	GO:0019203: carbohydrate phosphatase activity	7.28E-04
26	GO:0050308: sugar-phosphatase activity	7.28E-04
27	GO:0005080: protein kinase C binding	7.28E-04
28	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.28E-04
29	GO:0004853: uroporphyrinogen decarboxylase activity	7.28E-04
30	GO:0042586: peptide deformylase activity	7.28E-04
31	GO:0004425: indole-3-glycerol-phosphate synthase activity	7.28E-04
32	GO:0051777: ent-kaurenoate oxidase activity	7.28E-04
33	GO:1905201: gibberellin transmembrane transporter activity	7.28E-04
34	GO:0004856: xylulokinase activity	7.28E-04
35	GO:0008184: glycogen phosphorylase activity	7.28E-04
36	GO:0004645: phosphorylase activity	7.28E-04
37	GO:0004033: aldo-keto reductase (NADP) activity	1.11E-03
38	GO:0004812: aminoacyl-tRNA ligase activity	1.31E-03
39	GO:0019156: isoamylase activity	1.57E-03
40	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.57E-03
41	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.57E-03
42	GO:0008934: inositol monophosphate 1-phosphatase activity	1.57E-03
43	GO:0052833: inositol monophosphate 4-phosphatase activity	1.57E-03
44	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.57E-03
45	GO:0004512: inositol-3-phosphate synthase activity	1.57E-03
46	GO:0047746: chlorophyllase activity	1.57E-03
47	GO:0003839: gamma-glutamylcyclotransferase activity	1.57E-03
48	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.57E-03
49	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.57E-03
50	GO:0004617: phosphoglycerate dehydrogenase activity	1.57E-03
51	GO:0004047: aminomethyltransferase activity	1.57E-03
52	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	1.57E-03
53	GO:0052832: inositol monophosphate 3-phosphatase activity	1.57E-03
54	GO:0033201: alpha-1,4-glucan synthase activity	1.57E-03
55	GO:0004817: cysteine-tRNA ligase activity	1.57E-03
56	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.57E-03
57	GO:0016630: protochlorophyllide reductase activity	1.57E-03
58	GO:0048038: quinone binding	2.09E-03
59	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.27E-03
60	GO:0004373: glycogen (starch) synthase activity	2.60E-03
61	GO:0003913: DNA photolyase activity	2.60E-03
62	GO:0004148: dihydrolipoyl dehydrogenase activity	2.60E-03
63	GO:0004751: ribose-5-phosphate isomerase activity	2.60E-03
64	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.60E-03
65	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	2.60E-03
66	GO:0070402: NADPH binding	2.60E-03
67	GO:0008864: formyltetrahydrofolate deformylase activity	2.60E-03
68	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.60E-03
69	GO:0015386: potassium:proton antiporter activity	2.61E-03
70	GO:0044183: protein binding involved in protein folding	2.61E-03
71	GO:0016168: chlorophyll binding	3.61E-03
72	GO:0016149: translation release factor activity, codon specific	3.78E-03
73	GO:0022890: inorganic cation transmembrane transporter activity	3.78E-03
74	GO:0009041: uridylate kinase activity	3.78E-03
75	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.78E-03
76	GO:0003999: adenine phosphoribosyltransferase activity	3.78E-03
77	GO:0008266: poly(U) RNA binding	3.85E-03
78	GO:0102483: scopolin beta-glucosidase activity	4.15E-03
79	GO:0031409: pigment binding	4.82E-03
80	GO:0015238: drug transmembrane transporter activity	5.04E-03
81	GO:0004392: heme oxygenase (decyclizing) activity	5.10E-03
82	GO:0043495: protein anchor	5.10E-03
83	GO:0004659: prenyltransferase activity	5.10E-03
84	GO:0016279: protein-lysine N-methyltransferase activity	5.10E-03
85	GO:0045430: chalcone isomerase activity	5.10E-03
86	GO:0004045: aminoacyl-tRNA hydrolase activity	5.10E-03
87	GO:0003723: RNA binding	5.48E-03
88	GO:0016773: phosphotransferase activity, alcohol group as acceptor	6.57E-03
89	GO:0003959: NADPH dehydrogenase activity	6.57E-03
90	GO:0016846: carbon-sulfur lyase activity	6.57E-03
91	GO:0016788: hydrolase activity, acting on ester bonds	6.58E-03
92	GO:0003993: acid phosphatase activity	6.79E-03
93	GO:0008422: beta-glucosidase activity	7.18E-03
94	GO:0004629: phospholipase C activity	8.16E-03
95	GO:0016208: AMP binding	8.16E-03
96	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	8.16E-03
97	GO:0015081: sodium ion transmembrane transporter activity	8.16E-03
98	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	8.16E-03
99	GO:2001070: starch binding	8.16E-03
100	GO:0003727: single-stranded RNA binding	8.50E-03
101	GO:0004185: serine-type carboxypeptidase activity	8.89E-03
102	GO:0047134: protein-disulfide reductase activity	9.22E-03
103	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	9.88E-03
104	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.88E-03
105	GO:0004435: phosphatidylinositol phospholipase C activity	9.88E-03
106	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.88E-03
107	GO:0008195: phosphatidate phosphatase activity	9.88E-03
108	GO:0052689: carboxylic ester hydrolase activity	1.11E-02
109	GO:0004791: thioredoxin-disulfide reductase activity	1.16E-02
110	GO:0019899: enzyme binding	1.17E-02
111	GO:0004525: ribonuclease III activity	1.37E-02
112	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.52E-02
113	GO:0046914: transition metal ion binding	1.57E-02
114	GO:0016791: phosphatase activity	1.62E-02
115	GO:0008237: metallopeptidase activity	1.73E-02
116	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.79E-02
117	GO:0003747: translation release factor activity	1.79E-02
118	GO:0005525: GTP binding	1.88E-02
119	GO:0005381: iron ion transmembrane transporter activity	2.01E-02
120	GO:0016844: strictosidine synthase activity	2.01E-02
121	GO:0051082: unfolded protein binding	2.04E-02
122	GO:0015020: glucuronosyltransferase activity	2.25E-02
123	GO:0008559: xenobiotic-transporting ATPase activity	2.49E-02
124	GO:0047372: acylglycerol lipase activity	2.49E-02
125	GO:0008515: sucrose transmembrane transporter activity	2.49E-02
126	GO:0000049: tRNA binding	2.75E-02
127	GO:0008378: galactosyltransferase activity	2.75E-02
128	GO:0004222: metalloendopeptidase activity	2.80E-02
129	GO:0004022: alcohol dehydrogenase (NAD) activity	3.01E-02
130	GO:0004089: carbonate dehydratase activity	3.01E-02
131	GO:0031072: heat shock protein binding	3.01E-02
132	GO:0003725: double-stranded RNA binding	3.01E-02
133	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.28E-02
134	GO:0003774: motor activity	3.28E-02
135	GO:0008083: growth factor activity	3.28E-02
136	GO:0005215: transporter activity	3.53E-02
137	GO:0051119: sugar transmembrane transporter activity	3.56E-02
138	GO:0015297: antiporter activity	3.82E-02
139	GO:0051536: iron-sulfur cluster binding	4.14E-02
140	GO:0015079: potassium ion transmembrane transporter activity	4.44E-02
141	GO:0035091: phosphatidylinositol binding	4.48E-02
142	GO:0043621: protein self-association	4.48E-02
143	GO:0004176: ATP-dependent peptidase activity	4.75E-02
144	GO:0003743: translation initiation factor activity	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009507: chloroplast	7.09E-57
3	GO:0009570: chloroplast stroma	5.13E-32
4	GO:0009535: chloroplast thylakoid membrane	9.68E-22
5	GO:0009941: chloroplast envelope	1.93E-13
6	GO:0009534: chloroplast thylakoid	4.55E-12
7	GO:0009579: thylakoid	3.86E-11
8	GO:0009543: chloroplast thylakoid lumen	7.17E-08
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	8.00E-08
10	GO:0009295: nucleoid	1.93E-07
11	GO:0010007: magnesium chelatase complex	3.48E-07
12	GO:0009508: plastid chromosome	7.79E-07
13	GO:0031969: chloroplast membrane	8.19E-07
14	GO:0009654: photosystem II oxygen evolving complex	7.25E-05
15	GO:0031977: thylakoid lumen	2.94E-04
16	GO:0030095: chloroplast photosystem II	4.29E-04
17	GO:0009344: nitrite reductase complex [NAD(P)H]	7.28E-04
18	GO:0009547: plastid ribosome	7.28E-04
19	GO:0019898: extrinsic component of membrane	1.91E-03
20	GO:0033281: TAT protein transport complex	2.60E-03
21	GO:0010319: stromule	2.89E-03
22	GO:0030529: intracellular ribonucleoprotein complex	3.36E-03
23	GO:0030658: transport vesicle membrane	3.78E-03
24	GO:0042646: plastid nucleoid	3.78E-03
25	GO:0030076: light-harvesting complex	4.32E-03
26	GO:0009706: chloroplast inner membrane	4.88E-03
27	GO:0009517: PSII associated light-harvesting complex II	5.10E-03
28	GO:0042651: thylakoid membrane	5.92E-03
29	GO:0010287: plastoglobule	6.34E-03
30	GO:0009536: plastid	7.93E-03
31	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	8.16E-03
32	GO:0009840: chloroplastic endopeptidase Clp complex	9.88E-03
33	GO:0009522: photosystem I	1.16E-02
34	GO:0009523: photosystem II	1.25E-02
35	GO:0016020: membrane	1.33E-02
36	GO:0012507: ER to Golgi transport vesicle membrane	1.37E-02
37	GO:0009501: amyloplast	1.37E-02
38	GO:0009539: photosystem II reaction center	1.57E-02
39	GO:0042644: chloroplast nucleoid	1.79E-02
40	GO:0005763: mitochondrial small ribosomal subunit	1.79E-02
41	GO:0016459: myosin complex	2.25E-02
42	GO:0009707: chloroplast outer membrane	2.54E-02
43	GO:0000311: plastid large ribosomal subunit	2.75E-02
44	GO:0032040: small-subunit processome	2.75E-02
45	GO:0005840: ribosome	3.17E-02
46	GO:0031902: late endosome membrane	3.82E-02
47	GO:0016021: integral component of membrane	3.87E-02
48	GO:0015935: small ribosomal subunit	4.75E-02
49	GO:0009532: plastid stroma	4.75E-02