GO Enrichment Analysis of Co-expressed Genes with
AT4G12490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048034: heme O biosynthetic process | 0.00E+00 |
| 2 | GO:0016102: diterpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0072722: response to amitrole | 0.00E+00 |
| 4 | GO:0042964: thioredoxin reduction | 2.64E-05 |
| 5 | GO:0010272: response to silver ion | 1.18E-04 |
| 6 | GO:0052546: cell wall pectin metabolic process | 1.18E-04 |
| 7 | GO:0006556: S-adenosylmethionine biosynthetic process | 1.18E-04 |
| 8 | GO:0040009: regulation of growth rate | 1.18E-04 |
| 9 | GO:0006065: UDP-glucuronate biosynthetic process | 1.18E-04 |
| 10 | GO:0006517: protein deglycosylation | 1.18E-04 |
| 11 | GO:0010252: auxin homeostasis | 1.69E-04 |
| 12 | GO:0000304: response to singlet oxygen | 3.07E-04 |
| 13 | GO:0009082: branched-chain amino acid biosynthetic process | 4.53E-04 |
| 14 | GO:0009099: valine biosynthetic process | 4.53E-04 |
| 15 | GO:0080113: regulation of seed growth | 4.53E-04 |
| 16 | GO:0071669: plant-type cell wall organization or biogenesis | 5.30E-04 |
| 17 | GO:0050829: defense response to Gram-negative bacterium | 5.30E-04 |
| 18 | GO:0080027: response to herbivore | 5.30E-04 |
| 19 | GO:0006491: N-glycan processing | 6.10E-04 |
| 20 | GO:0007186: G-protein coupled receptor signaling pathway | 6.94E-04 |
| 21 | GO:0010497: plasmodesmata-mediated intercellular transport | 6.94E-04 |
| 22 | GO:0019430: removal of superoxide radicals | 6.94E-04 |
| 23 | GO:0009097: isoleucine biosynthetic process | 6.94E-04 |
| 24 | GO:0006783: heme biosynthetic process | 7.80E-04 |
| 25 | GO:0006754: ATP biosynthetic process | 7.80E-04 |
| 26 | GO:0009056: catabolic process | 7.80E-04 |
| 27 | GO:0009098: leucine biosynthetic process | 8.68E-04 |
| 28 | GO:2000280: regulation of root development | 8.68E-04 |
| 29 | GO:0006032: chitin catabolic process | 9.59E-04 |
| 30 | GO:0009688: abscisic acid biosynthetic process | 9.59E-04 |
| 31 | GO:0006415: translational termination | 1.05E-03 |
| 32 | GO:0000272: polysaccharide catabolic process | 1.05E-03 |
| 33 | GO:0006807: nitrogen compound metabolic process | 1.25E-03 |
| 34 | GO:0010150: leaf senescence | 1.38E-03 |
| 35 | GO:0009617: response to bacterium | 1.63E-03 |
| 36 | GO:0045333: cellular respiration | 1.67E-03 |
| 37 | GO:0006874: cellular calcium ion homeostasis | 1.78E-03 |
| 38 | GO:0016998: cell wall macromolecule catabolic process | 1.90E-03 |
| 39 | GO:0030245: cellulose catabolic process | 2.02E-03 |
| 40 | GO:0006730: one-carbon metabolic process | 2.02E-03 |
| 41 | GO:0009693: ethylene biosynthetic process | 2.14E-03 |
| 42 | GO:0009733: response to auxin | 2.51E-03 |
| 43 | GO:0015991: ATP hydrolysis coupled proton transport | 2.52E-03 |
| 44 | GO:0009851: auxin biosynthetic process | 2.91E-03 |
| 45 | GO:0071281: cellular response to iron ion | 3.33E-03 |
| 46 | GO:0019760: glucosinolate metabolic process | 3.47E-03 |
| 47 | GO:0009567: double fertilization forming a zygote and endosperm | 3.47E-03 |
| 48 | GO:0046686: response to cadmium ion | 3.79E-03 |
| 49 | GO:0009615: response to virus | 3.91E-03 |
| 50 | GO:0009627: systemic acquired resistance | 4.22E-03 |
| 51 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.37E-03 |
| 52 | GO:0016049: cell growth | 4.53E-03 |
| 53 | GO:0010311: lateral root formation | 4.85E-03 |
| 54 | GO:0009407: toxin catabolic process | 5.02E-03 |
| 55 | GO:0009926: auxin polar transport | 6.57E-03 |
| 56 | GO:0009636: response to toxic substance | 7.12E-03 |
| 57 | GO:0009846: pollen germination | 7.69E-03 |
| 58 | GO:0048316: seed development | 9.29E-03 |
| 59 | GO:0009620: response to fungus | 9.71E-03 |
| 60 | GO:0042545: cell wall modification | 1.01E-02 |
| 61 | GO:0009058: biosynthetic process | 1.26E-02 |
| 62 | GO:0040008: regulation of growth | 1.47E-02 |
| 63 | GO:0045490: pectin catabolic process | 1.52E-02 |
| 64 | GO:0055114: oxidation-reduction process | 1.89E-02 |
| 65 | GO:0009860: pollen tube growth | 2.19E-02 |
| 66 | GO:0044550: secondary metabolite biosynthetic process | 2.57E-02 |
| 67 | GO:0045454: cell redox homeostasis | 2.75E-02 |
| 68 | GO:0009753: response to jasmonic acid | 3.36E-02 |
| 69 | GO:0009734: auxin-activated signaling pathway | 4.07E-02 |
| 70 | GO:0009416: response to light stimulus | 4.80E-02 |
| 71 | GO:0009611: response to wounding | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080013: (E,E)-geranyllinalool synthase activity | 0.00E+00 |
| 2 | GO:0008495: protoheme IX farnesyltransferase activity | 0.00E+00 |
| 3 | GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | 2.64E-05 |
| 4 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 1.18E-04 |
| 5 | GO:0004478: methionine adenosyltransferase activity | 1.18E-04 |
| 6 | GO:0016149: translation release factor activity, codon specific | 1.76E-04 |
| 7 | GO:0052656: L-isoleucine transaminase activity | 1.76E-04 |
| 8 | GO:0052654: L-leucine transaminase activity | 1.76E-04 |
| 9 | GO:0052655: L-valine transaminase activity | 1.76E-04 |
| 10 | GO:0004084: branched-chain-amino-acid transaminase activity | 2.39E-04 |
| 11 | GO:0004930: G-protein coupled receptor activity | 2.39E-04 |
| 12 | GO:0004031: aldehyde oxidase activity | 2.39E-04 |
| 13 | GO:0050302: indole-3-acetaldehyde oxidase activity | 2.39E-04 |
| 14 | GO:0010279: indole-3-acetic acid amido synthetase activity | 2.39E-04 |
| 15 | GO:0004659: prenyltransferase activity | 2.39E-04 |
| 16 | GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity | 3.78E-04 |
| 17 | GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity | 3.78E-04 |
| 18 | GO:0004311: farnesyltranstransferase activity | 6.10E-04 |
| 19 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 7.80E-04 |
| 20 | GO:0003747: translation release factor activity | 7.80E-04 |
| 21 | GO:0009672: auxin:proton symporter activity | 8.68E-04 |
| 22 | GO:0004568: chitinase activity | 9.59E-04 |
| 23 | GO:0010329: auxin efflux transmembrane transporter activity | 1.25E-03 |
| 24 | GO:0005217: intracellular ligand-gated ion channel activity | 1.45E-03 |
| 25 | GO:0008061: chitin binding | 1.45E-03 |
| 26 | GO:0004970: ionotropic glutamate receptor activity | 1.45E-03 |
| 27 | GO:0010333: terpene synthase activity | 1.90E-03 |
| 28 | GO:0000287: magnesium ion binding | 2.07E-03 |
| 29 | GO:0005506: iron ion binding | 2.12E-03 |
| 30 | GO:0008810: cellulase activity | 2.14E-03 |
| 31 | GO:0004791: thioredoxin-disulfide reductase activity | 2.78E-03 |
| 32 | GO:0004518: nuclease activity | 3.19E-03 |
| 33 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 4.37E-03 |
| 34 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 5.18E-03 |
| 35 | GO:0030145: manganese ion binding | 5.18E-03 |
| 36 | GO:0004364: glutathione transferase activity | 6.39E-03 |
| 37 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.94E-03 |
| 38 | GO:0051287: NAD binding | 7.50E-03 |
| 39 | GO:0045330: aspartyl esterase activity | 8.68E-03 |
| 40 | GO:0045735: nutrient reservoir activity | 9.08E-03 |
| 41 | GO:0019825: oxygen binding | 9.60E-03 |
| 42 | GO:0030599: pectinesterase activity | 9.92E-03 |
| 43 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.23E-02 |
| 44 | GO:0030170: pyridoxal phosphate binding | 1.30E-02 |
| 45 | GO:0046910: pectinesterase inhibitor activity | 1.45E-02 |
| 46 | GO:0020037: heme binding | 2.16E-02 |
| 47 | GO:0050660: flavin adenine dinucleotide binding | 2.30E-02 |
| 48 | GO:0004497: monooxygenase activity | 2.42E-02 |
| 49 | GO:0052689: carboxylic ester hydrolase activity | 2.60E-02 |
| 50 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.91E-02 |
| 51 | GO:0003924: GTPase activity | 3.19E-02 |
| 52 | GO:0009055: electron carrier activity | 3.36E-02 |
| 53 | GO:0016887: ATPase activity | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005618: cell wall | 2.63E-03 |
| 2 | GO:0071944: cell periphery | 3.33E-03 |
| 3 | GO:0005789: endoplasmic reticulum membrane | 3.70E-03 |
| 4 | GO:0005759: mitochondrial matrix | 1.42E-02 |
| 5 | GO:0009505: plant-type cell wall | 1.72E-02 |
| 6 | GO:0005829: cytosol | 2.10E-02 |
| 7 | GO:0005743: mitochondrial inner membrane | 3.03E-02 |
| 8 | GO:0016020: membrane | 4.76E-02 |
| 9 | GO:0048046: apoplast | 4.96E-02 |