GO Enrichment Analysis of Co-expressed Genes with
AT4G12060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051013: microtubule severing | 9.50E-05 |
| 2 | GO:0034757: negative regulation of iron ion transport | 9.50E-05 |
| 3 | GO:0008153: para-aminobenzoic acid biosynthetic process | 9.50E-05 |
| 4 | GO:0009926: auxin polar transport | 2.07E-04 |
| 5 | GO:0010271: regulation of chlorophyll catabolic process | 2.24E-04 |
| 6 | GO:0001736: establishment of planar polarity | 2.24E-04 |
| 7 | GO:0010024: phytochromobilin biosynthetic process | 2.24E-04 |
| 8 | GO:0009825: multidimensional cell growth | 2.41E-04 |
| 9 | GO:0080117: secondary growth | 3.73E-04 |
| 10 | GO:0051513: regulation of monopolar cell growth | 5.37E-04 |
| 11 | GO:0051639: actin filament network formation | 5.37E-04 |
| 12 | GO:0034059: response to anoxia | 5.37E-04 |
| 13 | GO:0015846: polyamine transport | 7.14E-04 |
| 14 | GO:0009956: radial pattern formation | 7.14E-04 |
| 15 | GO:0051764: actin crosslink formation | 7.14E-04 |
| 16 | GO:0048831: regulation of shoot system development | 1.10E-03 |
| 17 | GO:0010411: xyloglucan metabolic process | 1.21E-03 |
| 18 | GO:0009942: longitudinal axis specification | 1.31E-03 |
| 19 | GO:0048509: regulation of meristem development | 1.31E-03 |
| 20 | GO:0046654: tetrahydrofolate biosynthetic process | 1.31E-03 |
| 21 | GO:0010019: chloroplast-nucleus signaling pathway | 1.31E-03 |
| 22 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.31E-03 |
| 23 | GO:0000160: phosphorelay signal transduction system | 1.40E-03 |
| 24 | GO:0009610: response to symbiotic fungus | 1.54E-03 |
| 25 | GO:0007389: pattern specification process | 2.03E-03 |
| 26 | GO:0009657: plastid organization | 2.03E-03 |
| 27 | GO:0042546: cell wall biogenesis | 2.24E-03 |
| 28 | GO:0000373: Group II intron splicing | 2.29E-03 |
| 29 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.56E-03 |
| 30 | GO:0008202: steroid metabolic process | 2.56E-03 |
| 31 | GO:0005982: starch metabolic process | 2.56E-03 |
| 32 | GO:0006535: cysteine biosynthetic process from serine | 2.85E-03 |
| 33 | GO:0048829: root cap development | 2.85E-03 |
| 34 | GO:0009736: cytokinin-activated signaling pathway | 2.89E-03 |
| 35 | GO:0048765: root hair cell differentiation | 3.14E-03 |
| 36 | GO:0005983: starch catabolic process | 3.44E-03 |
| 37 | GO:0045037: protein import into chloroplast stroma | 3.44E-03 |
| 38 | GO:0050826: response to freezing | 3.76E-03 |
| 39 | GO:0010540: basipetal auxin transport | 4.08E-03 |
| 40 | GO:0010020: chloroplast fission | 4.08E-03 |
| 41 | GO:0009933: meristem structural organization | 4.08E-03 |
| 42 | GO:0010025: wax biosynthetic process | 4.75E-03 |
| 43 | GO:0051017: actin filament bundle assembly | 5.10E-03 |
| 44 | GO:0019344: cysteine biosynthetic process | 5.10E-03 |
| 45 | GO:0043622: cortical microtubule organization | 5.46E-03 |
| 46 | GO:0009734: auxin-activated signaling pathway | 5.49E-03 |
| 47 | GO:0003333: amino acid transmembrane transport | 5.83E-03 |
| 48 | GO:0035428: hexose transmembrane transport | 6.20E-03 |
| 49 | GO:0071215: cellular response to abscisic acid stimulus | 6.58E-03 |
| 50 | GO:0010091: trichome branching | 6.98E-03 |
| 51 | GO:0045492: xylan biosynthetic process | 6.98E-03 |
| 52 | GO:0006284: base-excision repair | 6.98E-03 |
| 53 | GO:0070417: cellular response to cold | 7.38E-03 |
| 54 | GO:0010087: phloem or xylem histogenesis | 7.79E-03 |
| 55 | GO:0000226: microtubule cytoskeleton organization | 7.79E-03 |
| 56 | GO:0009958: positive gravitropism | 8.21E-03 |
| 57 | GO:0046323: glucose import | 8.21E-03 |
| 58 | GO:0010305: leaf vascular tissue pattern formation | 8.21E-03 |
| 59 | GO:0010583: response to cyclopentenone | 9.96E-03 |
| 60 | GO:0010252: auxin homeostasis | 1.09E-02 |
| 61 | GO:0010029: regulation of seed germination | 1.28E-02 |
| 62 | GO:0080167: response to karrikin | 1.36E-02 |
| 63 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.40E-02 |
| 64 | GO:0018298: protein-chromophore linkage | 1.49E-02 |
| 65 | GO:0009832: plant-type cell wall biogenesis | 1.54E-02 |
| 66 | GO:0010311: lateral root formation | 1.54E-02 |
| 67 | GO:0007568: aging | 1.65E-02 |
| 68 | GO:0006865: amino acid transport | 1.70E-02 |
| 69 | GO:0071555: cell wall organization | 1.80E-02 |
| 70 | GO:0006281: DNA repair | 2.01E-02 |
| 71 | GO:0009733: response to auxin | 2.09E-02 |
| 72 | GO:0051707: response to other organism | 2.10E-02 |
| 73 | GO:0009636: response to toxic substance | 2.29E-02 |
| 74 | GO:0009965: leaf morphogenesis | 2.29E-02 |
| 75 | GO:0009809: lignin biosynthetic process | 2.60E-02 |
| 76 | GO:0009909: regulation of flower development | 2.80E-02 |
| 77 | GO:0006417: regulation of translation | 2.80E-02 |
| 78 | GO:0009624: response to nematode | 3.34E-02 |
| 79 | GO:0051726: regulation of cell cycle | 3.49E-02 |
| 80 | GO:0009416: response to light stimulus | 3.56E-02 |
| 81 | GO:0006633: fatty acid biosynthetic process | 4.61E-02 |
| 82 | GO:0007623: circadian rhythm | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019808: polyamine binding | 0.00E+00 |
| 2 | GO:0008696: 4-amino-4-deoxychorismate lyase activity | 0.00E+00 |
| 3 | GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor | 0.00E+00 |
| 4 | GO:0047810: D-alanine:2-oxoglutarate aminotransferase activity | 0.00E+00 |
| 5 | GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity | 0.00E+00 |
| 6 | GO:0008568: microtubule-severing ATPase activity | 9.50E-05 |
| 7 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 9.50E-05 |
| 8 | GO:0019203: carbohydrate phosphatase activity | 9.50E-05 |
| 9 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 9.50E-05 |
| 10 | GO:0050017: L-3-cyanoalanine synthase activity | 2.24E-04 |
| 11 | GO:0008805: carbon-monoxide oxygenase activity | 2.24E-04 |
| 12 | GO:0009884: cytokinin receptor activity | 2.24E-04 |
| 13 | GO:0005034: osmosensor activity | 3.73E-04 |
| 14 | GO:0003913: DNA photolyase activity | 3.73E-04 |
| 15 | GO:0010011: auxin binding | 7.14E-04 |
| 16 | GO:0010328: auxin influx transmembrane transporter activity | 7.14E-04 |
| 17 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.29E-04 |
| 18 | GO:0005471: ATP:ADP antiporter activity | 9.02E-04 |
| 19 | GO:0008725: DNA-3-methyladenine glycosylase activity | 9.02E-04 |
| 20 | GO:1990538: xylan O-acetyltransferase activity | 1.10E-03 |
| 21 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.21E-03 |
| 22 | GO:0019900: kinase binding | 1.31E-03 |
| 23 | GO:0004124: cysteine synthase activity | 1.31E-03 |
| 24 | GO:0016621: cinnamoyl-CoA reductase activity | 1.54E-03 |
| 25 | GO:0009881: photoreceptor activity | 1.54E-03 |
| 26 | GO:0008142: oxysterol binding | 2.03E-03 |
| 27 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.29E-03 |
| 28 | GO:0009672: auxin:proton symporter activity | 2.56E-03 |
| 29 | GO:0004673: protein histidine kinase activity | 2.85E-03 |
| 30 | GO:0000155: phosphorelay sensor kinase activity | 3.76E-03 |
| 31 | GO:0010329: auxin efflux transmembrane transporter activity | 3.76E-03 |
| 32 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.75E-03 |
| 33 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.75E-03 |
| 34 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.75E-03 |
| 35 | GO:0043424: protein histidine kinase binding | 5.46E-03 |
| 36 | GO:0015144: carbohydrate transmembrane transporter activity | 6.12E-03 |
| 37 | GO:0005351: sugar:proton symporter activity | 6.90E-03 |
| 38 | GO:0005355: glucose transmembrane transporter activity | 8.63E-03 |
| 39 | GO:0050662: coenzyme binding | 8.63E-03 |
| 40 | GO:0042802: identical protein binding | 8.97E-03 |
| 41 | GO:0019901: protein kinase binding | 9.06E-03 |
| 42 | GO:0000156: phosphorelay response regulator activity | 1.04E-02 |
| 43 | GO:0051015: actin filament binding | 1.04E-02 |
| 44 | GO:0016413: O-acetyltransferase activity | 1.18E-02 |
| 45 | GO:0030247: polysaccharide binding | 1.38E-02 |
| 46 | GO:0005096: GTPase activator activity | 1.54E-02 |
| 47 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.59E-02 |
| 48 | GO:0050897: cobalt ion binding | 1.65E-02 |
| 49 | GO:0043621: protein self-association | 2.23E-02 |
| 50 | GO:0035091: phosphatidylinositol binding | 2.23E-02 |
| 51 | GO:0015293: symporter activity | 2.29E-02 |
| 52 | GO:0015171: amino acid transmembrane transporter activity | 2.80E-02 |
| 53 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.00E-02 |
| 54 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.14E-02 |
| 55 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.14E-02 |
| 56 | GO:0030170: pyridoxal phosphate binding | 4.23E-02 |
| 57 | GO:0016740: transferase activity | 4.33E-02 |
| 58 | GO:0008565: protein transporter activity | 4.46E-02 |
| 59 | GO:0004674: protein serine/threonine kinase activity | 4.54E-02 |
| 60 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035452: extrinsic component of plastid membrane | 0.00E+00 |
| 2 | GO:0042597: periplasmic space | 0.00E+00 |
| 3 | GO:0032432: actin filament bundle | 5.37E-04 |
| 4 | GO:0009986: cell surface | 1.54E-03 |
| 5 | GO:0005884: actin filament | 3.14E-03 |
| 6 | GO:0016602: CCAAT-binding factor complex | 3.76E-03 |
| 7 | GO:0030529: intracellular ribonucleoprotein complex | 1.23E-02 |
| 8 | GO:0009941: chloroplast envelope | 1.40E-02 |
| 9 | GO:0009707: chloroplast outer membrane | 1.49E-02 |
| 10 | GO:0009536: plastid | 2.33E-02 |
| 11 | GO:0009570: chloroplast stroma | 2.47E-02 |
| 12 | GO:0009706: chloroplast inner membrane | 3.34E-02 |
| 13 | GO:0005623: cell | 4.00E-02 |