GO Enrichment Analysis of Co-expressed Genes with
AT4G12000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1902289: negative regulation of defense response to oomycetes | 0.00E+00 |
| 2 | GO:0005993: trehalose catabolic process | 0.00E+00 |
| 3 | GO:2000378: negative regulation of reactive oxygen species metabolic process | 0.00E+00 |
| 4 | GO:0010407: non-classical arabinogalactan protein metabolic process | 0.00E+00 |
| 5 | GO:0006983: ER overload response | 0.00E+00 |
| 6 | GO:1902009: positive regulation of toxin transport | 0.00E+00 |
| 7 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 8 | GO:1990641: response to iron ion starvation | 9.50E-05 |
| 9 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 9.50E-05 |
| 10 | GO:1903648: positive regulation of chlorophyll catabolic process | 9.50E-05 |
| 11 | GO:0000077: DNA damage checkpoint | 9.50E-05 |
| 12 | GO:0042853: L-alanine catabolic process | 2.24E-04 |
| 13 | GO:0040020: regulation of meiotic nuclear division | 2.24E-04 |
| 14 | GO:0009812: flavonoid metabolic process | 2.24E-04 |
| 15 | GO:0006101: citrate metabolic process | 2.24E-04 |
| 16 | GO:0043066: negative regulation of apoptotic process | 2.24E-04 |
| 17 | GO:0080183: response to photooxidative stress | 2.24E-04 |
| 18 | GO:0030150: protein import into mitochondrial matrix | 3.00E-04 |
| 19 | GO:0052546: cell wall pectin metabolic process | 3.73E-04 |
| 20 | GO:0006065: UDP-glucuronate biosynthetic process | 3.73E-04 |
| 21 | GO:0009410: response to xenobiotic stimulus | 3.73E-04 |
| 22 | GO:0051639: actin filament network formation | 5.37E-04 |
| 23 | GO:0071323: cellular response to chitin | 5.37E-04 |
| 24 | GO:0050482: arachidonic acid secretion | 5.37E-04 |
| 25 | GO:0055070: copper ion homeostasis | 5.37E-04 |
| 26 | GO:0006621: protein retention in ER lumen | 7.14E-04 |
| 27 | GO:0051764: actin crosslink formation | 7.14E-04 |
| 28 | GO:0006097: glyoxylate cycle | 9.02E-04 |
| 29 | GO:0009229: thiamine diphosphate biosynthetic process | 9.02E-04 |
| 30 | GO:0009228: thiamine biosynthetic process | 1.10E-03 |
| 31 | GO:1900425: negative regulation of defense response to bacterium | 1.10E-03 |
| 32 | GO:0006014: D-ribose metabolic process | 1.10E-03 |
| 33 | GO:1900057: positive regulation of leaf senescence | 1.54E-03 |
| 34 | GO:0006333: chromatin assembly or disassembly | 1.54E-03 |
| 35 | GO:0030307: positive regulation of cell growth | 1.54E-03 |
| 36 | GO:0010044: response to aluminum ion | 1.54E-03 |
| 37 | GO:0007155: cell adhesion | 1.78E-03 |
| 38 | GO:0045010: actin nucleation | 1.78E-03 |
| 39 | GO:0006102: isocitrate metabolic process | 1.78E-03 |
| 40 | GO:0016559: peroxisome fission | 1.78E-03 |
| 41 | GO:0006644: phospholipid metabolic process | 1.78E-03 |
| 42 | GO:0009860: pollen tube growth | 1.82E-03 |
| 43 | GO:0007338: single fertilization | 2.29E-03 |
| 44 | GO:0010332: response to gamma radiation | 2.29E-03 |
| 45 | GO:0000902: cell morphogenesis | 2.29E-03 |
| 46 | GO:0009086: methionine biosynthetic process | 2.56E-03 |
| 47 | GO:0008202: steroid metabolic process | 2.56E-03 |
| 48 | GO:0009846: pollen germination | 2.70E-03 |
| 49 | GO:0043069: negative regulation of programmed cell death | 2.85E-03 |
| 50 | GO:0010224: response to UV-B | 2.99E-03 |
| 51 | GO:0000038: very long-chain fatty acid metabolic process | 3.14E-03 |
| 52 | GO:0045037: protein import into chloroplast stroma | 3.44E-03 |
| 53 | GO:0000266: mitochondrial fission | 3.44E-03 |
| 54 | GO:2000012: regulation of auxin polar transport | 3.76E-03 |
| 55 | GO:0030036: actin cytoskeleton organization | 3.76E-03 |
| 56 | GO:0002237: response to molecule of bacterial origin | 4.08E-03 |
| 57 | GO:0007015: actin filament organization | 4.08E-03 |
| 58 | GO:0009901: anther dehiscence | 4.41E-03 |
| 59 | GO:0070588: calcium ion transmembrane transport | 4.41E-03 |
| 60 | GO:0000162: tryptophan biosynthetic process | 4.75E-03 |
| 61 | GO:0034976: response to endoplasmic reticulum stress | 4.75E-03 |
| 62 | GO:0000027: ribosomal large subunit assembly | 5.10E-03 |
| 63 | GO:0009863: salicylic acid mediated signaling pathway | 5.10E-03 |
| 64 | GO:0051017: actin filament bundle assembly | 5.10E-03 |
| 65 | GO:0006289: nucleotide-excision repair | 5.10E-03 |
| 66 | GO:0006334: nucleosome assembly | 5.83E-03 |
| 67 | GO:0009814: defense response, incompatible interaction | 6.20E-03 |
| 68 | GO:0031348: negative regulation of defense response | 6.20E-03 |
| 69 | GO:0009411: response to UV | 6.58E-03 |
| 70 | GO:0010584: pollen exine formation | 6.98E-03 |
| 71 | GO:0009555: pollen development | 7.37E-03 |
| 72 | GO:0006470: protein dephosphorylation | 8.07E-03 |
| 73 | GO:0010197: polar nucleus fusion | 8.21E-03 |
| 74 | GO:0008380: RNA splicing | 8.42E-03 |
| 75 | GO:0006623: protein targeting to vacuole | 9.06E-03 |
| 76 | GO:0019252: starch biosynthetic process | 9.06E-03 |
| 77 | GO:0032502: developmental process | 9.96E-03 |
| 78 | GO:0009630: gravitropism | 9.96E-03 |
| 79 | GO:0006457: protein folding | 1.02E-02 |
| 80 | GO:0009567: double fertilization forming a zygote and endosperm | 1.09E-02 |
| 81 | GO:0007275: multicellular organism development | 1.17E-02 |
| 82 | GO:0001666: response to hypoxia | 1.23E-02 |
| 83 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.28E-02 |
| 84 | GO:0009816: defense response to bacterium, incompatible interaction | 1.28E-02 |
| 85 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.38E-02 |
| 86 | GO:0048767: root hair elongation | 1.54E-02 |
| 87 | GO:0010119: regulation of stomatal movement | 1.65E-02 |
| 88 | GO:0000724: double-strand break repair via homologous recombination | 1.70E-02 |
| 89 | GO:0045087: innate immune response | 1.76E-02 |
| 90 | GO:0006099: tricarboxylic acid cycle | 1.81E-02 |
| 91 | GO:0006631: fatty acid metabolic process | 1.99E-02 |
| 92 | GO:0009408: response to heat | 2.01E-02 |
| 93 | GO:0010114: response to red light | 2.10E-02 |
| 94 | GO:0000209: protein polyubiquitination | 2.16E-02 |
| 95 | GO:0006508: proteolysis | 2.28E-02 |
| 96 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.41E-02 |
| 97 | GO:0015031: protein transport | 2.44E-02 |
| 98 | GO:0042538: hyperosmotic salinity response | 2.47E-02 |
| 99 | GO:0006812: cation transport | 2.47E-02 |
| 100 | GO:0006486: protein glycosylation | 2.60E-02 |
| 101 | GO:0006857: oligopeptide transport | 2.73E-02 |
| 102 | GO:0006096: glycolytic process | 2.93E-02 |
| 103 | GO:0046686: response to cadmium ion | 3.14E-02 |
| 104 | GO:0009735: response to cytokinin | 3.26E-02 |
| 105 | GO:0006396: RNA processing | 3.42E-02 |
| 106 | GO:0009738: abscisic acid-activated signaling pathway | 3.45E-02 |
| 107 | GO:0000398: mRNA splicing, via spliceosome | 3.70E-02 |
| 108 | GO:0009058: biosynthetic process | 4.07E-02 |
| 109 | GO:0055085: transmembrane transport | 4.51E-02 |
| 110 | GO:0006413: translational initiation | 4.69E-02 |
| 111 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004555: alpha,alpha-trehalase activity | 0.00E+00 |
| 2 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 3 | GO:0050334: thiaminase activity | 0.00E+00 |
| 4 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 5 | GO:0061133: endopeptidase activator activity | 0.00E+00 |
| 6 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 7 | GO:0004623: phospholipase A2 activity | 1.37E-05 |
| 8 | GO:0015927: trehalase activity | 9.50E-05 |
| 9 | GO:0047150: betaine-homocysteine S-methyltransferase activity | 9.50E-05 |
| 10 | GO:0016920: pyroglutamyl-peptidase activity | 9.50E-05 |
| 11 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.24E-04 |
| 12 | GO:0032934: sterol binding | 2.24E-04 |
| 13 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.24E-04 |
| 14 | GO:0003994: aconitate hydratase activity | 2.24E-04 |
| 15 | GO:0000975: regulatory region DNA binding | 3.73E-04 |
| 16 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 3.73E-04 |
| 17 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 5.37E-04 |
| 18 | GO:0030527: structural constituent of chromatin | 5.37E-04 |
| 19 | GO:0015369: calcium:proton antiporter activity | 7.14E-04 |
| 20 | GO:0046923: ER retention sequence binding | 7.14E-04 |
| 21 | GO:0070628: proteasome binding | 7.14E-04 |
| 22 | GO:0015368: calcium:cation antiporter activity | 7.14E-04 |
| 23 | GO:0004834: tryptophan synthase activity | 7.14E-04 |
| 24 | GO:0004747: ribokinase activity | 1.31E-03 |
| 25 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.78E-03 |
| 26 | GO:0008865: fructokinase activity | 1.78E-03 |
| 27 | GO:0015491: cation:cation antiporter activity | 1.78E-03 |
| 28 | GO:0008142: oxysterol binding | 2.03E-03 |
| 29 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.29E-03 |
| 30 | GO:0004743: pyruvate kinase activity | 2.56E-03 |
| 31 | GO:0030955: potassium ion binding | 2.56E-03 |
| 32 | GO:0030234: enzyme regulator activity | 2.85E-03 |
| 33 | GO:0042803: protein homodimerization activity | 2.90E-03 |
| 34 | GO:0015198: oligopeptide transporter activity | 3.44E-03 |
| 35 | GO:0008378: galactosyltransferase activity | 3.44E-03 |
| 36 | GO:0005388: calcium-transporting ATPase activity | 3.76E-03 |
| 37 | GO:0004022: alcohol dehydrogenase (NAD) activity | 3.76E-03 |
| 38 | GO:0008061: chitin binding | 4.41E-03 |
| 39 | GO:0004725: protein tyrosine phosphatase activity | 4.75E-03 |
| 40 | GO:0043130: ubiquitin binding | 5.10E-03 |
| 41 | GO:0051087: chaperone binding | 5.46E-03 |
| 42 | GO:0030170: pyridoxal phosphate binding | 5.68E-03 |
| 43 | GO:0004499: N,N-dimethylaniline monooxygenase activity | 6.98E-03 |
| 44 | GO:0005102: receptor binding | 7.38E-03 |
| 45 | GO:0050662: coenzyme binding | 8.63E-03 |
| 46 | GO:0004872: receptor activity | 9.06E-03 |
| 47 | GO:0005515: protein binding | 1.03E-02 |
| 48 | GO:0051015: actin filament binding | 1.04E-02 |
| 49 | GO:0005507: copper ion binding | 1.15E-02 |
| 50 | GO:0003682: chromatin binding | 1.16E-02 |
| 51 | GO:0004806: triglyceride lipase activity | 1.38E-02 |
| 52 | GO:0030247: polysaccharide binding | 1.38E-02 |
| 53 | GO:0004222: metalloendopeptidase activity | 1.59E-02 |
| 54 | GO:0005509: calcium ion binding | 1.63E-02 |
| 55 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.93E-02 |
| 56 | GO:0050661: NADP binding | 1.93E-02 |
| 57 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.23E-02 |
| 58 | GO:0051287: NAD binding | 2.41E-02 |
| 59 | GO:0022857: transmembrane transporter activity | 3.20E-02 |
| 60 | GO:0051082: unfolded protein binding | 3.34E-02 |
| 61 | GO:0015035: protein disulfide oxidoreductase activity | 3.42E-02 |
| 62 | GO:0016758: transferase activity, transferring hexosyl groups | 3.85E-02 |
| 63 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.69E-02 |
| 64 | GO:0015297: antiporter activity | 4.77E-02 |
| 65 | GO:0043565: sequence-specific DNA binding | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001405: presequence translocase-associated import motor | 9.50E-05 |
| 2 | GO:0032432: actin filament bundle | 5.37E-04 |
| 3 | GO:0005737: cytoplasm | 5.75E-04 |
| 4 | GO:0005774: vacuolar membrane | 6.68E-04 |
| 5 | GO:0005783: endoplasmic reticulum | 9.78E-04 |
| 6 | GO:0005801: cis-Golgi network | 1.31E-03 |
| 7 | GO:0016272: prefoldin complex | 1.31E-03 |
| 8 | GO:0005885: Arp2/3 protein complex | 1.31E-03 |
| 9 | GO:0000139: Golgi membrane | 1.60E-03 |
| 10 | GO:0005789: endoplasmic reticulum membrane | 1.98E-03 |
| 11 | GO:0031902: late endosome membrane | 1.99E-03 |
| 12 | GO:0030665: clathrin-coated vesicle membrane | 2.56E-03 |
| 13 | GO:0005829: cytosol | 2.81E-03 |
| 14 | GO:0017119: Golgi transport complex | 2.85E-03 |
| 15 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.14E-03 |
| 16 | GO:0005884: actin filament | 3.14E-03 |
| 17 | GO:0005773: vacuole | 5.53E-03 |
| 18 | GO:0005741: mitochondrial outer membrane | 5.83E-03 |
| 19 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 6.98E-03 |
| 20 | GO:0005794: Golgi apparatus | 9.06E-03 |
| 21 | GO:0016592: mediator complex | 9.96E-03 |
| 22 | GO:0000785: chromatin | 9.96E-03 |
| 23 | GO:0005778: peroxisomal membrane | 1.14E-02 |
| 24 | GO:0005788: endoplasmic reticulum lumen | 1.28E-02 |
| 25 | GO:0022625: cytosolic large ribosomal subunit | 1.43E-02 |
| 26 | GO:0000325: plant-type vacuole | 1.65E-02 |
| 27 | GO:0015934: large ribosomal subunit | 1.65E-02 |
| 28 | GO:0005743: mitochondrial inner membrane | 1.87E-02 |
| 29 | GO:0005635: nuclear envelope | 2.73E-02 |
| 30 | GO:0005887: integral component of plasma membrane | 2.73E-02 |
| 31 | GO:0005681: spliceosomal complex | 2.93E-02 |
| 32 | GO:0016607: nuclear speck | 3.00E-02 |
| 33 | GO:0005834: heterotrimeric G-protein complex | 3.07E-02 |
| 34 | GO:0009706: chloroplast inner membrane | 3.34E-02 |
| 35 | GO:0022626: cytosolic ribosome | 3.41E-02 |
| 36 | GO:0009543: chloroplast thylakoid lumen | 3.92E-02 |
| 37 | GO:0005623: cell | 4.00E-02 |
| 38 | GO:0005759: mitochondrial matrix | 4.61E-02 |
| 39 | GO:0009705: plant-type vacuole membrane | 4.93E-02 |