co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11980

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
2	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
3	GO:0043488: regulation of mRNA stability	0.00E+00
4	GO:0017038: protein import	0.00E+00
5	GO:0000372: Group I intron splicing	0.00E+00
6	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
7	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
8	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
9	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
10	GO:0007638: mechanosensory behavior	0.00E+00
11	GO:1905177: tracheary element differentiation	0.00E+00
12	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
13	GO:0008298: intracellular mRNA localization	0.00E+00
14	GO:0006573: valine metabolic process	0.00E+00
15	GO:0045184: establishment of protein localization	0.00E+00
16	GO:0015882: L-ascorbic acid transport	0.00E+00
17	GO:0006399: tRNA metabolic process	0.00E+00
18	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
19	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
20	GO:0070125: mitochondrial translational elongation	0.00E+00
21	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
22	GO:0070979: protein K11-linked ubiquitination	0.00E+00
23	GO:0009658: chloroplast organization	2.51E-08
24	GO:0010239: chloroplast mRNA processing	1.60E-06
25	GO:0045038: protein import into chloroplast thylakoid membrane	9.74E-06
26	GO:1900871: chloroplast mRNA modification	2.21E-05
27	GO:0018026: peptidyl-lysine monomethylation	2.21E-05
28	GO:0009451: RNA modification	2.87E-05
29	GO:0071482: cellular response to light stimulus	9.26E-05
30	GO:2001141: regulation of RNA biosynthetic process	1.49E-04
31	GO:0009416: response to light stimulus	2.29E-04
32	GO:0009793: embryo development ending in seed dormancy	2.45E-04
33	GO:0080110: sporopollenin biosynthetic process	3.76E-04
34	GO:0016123: xanthophyll biosynthetic process	3.76E-04
35	GO:0010207: photosystem II assembly	4.22E-04
36	GO:0010027: thylakoid membrane organization	5.48E-04
37	GO:1901259: chloroplast rRNA processing	6.92E-04
38	GO:0006419: alanyl-tRNA aminoacylation	7.22E-04
39	GO:0009090: homoserine biosynthetic process	7.22E-04
40	GO:0031426: polycistronic mRNA processing	7.22E-04
41	GO:0042659: regulation of cell fate specification	7.22E-04
42	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	7.22E-04
43	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	7.22E-04
44	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	7.22E-04
45	GO:0000012: single strand break repair	7.22E-04
46	GO:0043266: regulation of potassium ion transport	7.22E-04
47	GO:0010063: positive regulation of trichoblast fate specification	7.22E-04
48	GO:0090558: plant epidermis development	7.22E-04
49	GO:0006551: leucine metabolic process	7.22E-04
50	GO:2000021: regulation of ion homeostasis	7.22E-04
51	GO:1902025: nitrate import	7.22E-04
52	GO:0035987: endodermal cell differentiation	7.22E-04
53	GO:0070574: cadmium ion transmembrane transport	7.22E-04
54	GO:0051247: positive regulation of protein metabolic process	7.22E-04
55	GO:0090548: response to nitrate starvation	7.22E-04
56	GO:1902458: positive regulation of stomatal opening	7.22E-04
57	GO:0010028: xanthophyll cycle	7.22E-04
58	GO:2000905: negative regulation of starch metabolic process	7.22E-04
59	GO:0034599: cellular response to oxidative stress	1.27E-03
60	GO:0016117: carotenoid biosynthetic process	1.29E-03
61	GO:0009657: plastid organization	1.34E-03
62	GO:0008033: tRNA processing	1.42E-03
63	GO:0060359: response to ammonium ion	1.56E-03
64	GO:0048255: mRNA stabilization	1.56E-03
65	GO:0006432: phenylalanyl-tRNA aminoacylation	1.56E-03
66	GO:1902326: positive regulation of chlorophyll biosynthetic process	1.56E-03
67	GO:0006662: glycerol ether metabolic process	1.56E-03
68	GO:1904143: positive regulation of carotenoid biosynthetic process	1.56E-03
69	GO:0080009: mRNA methylation	1.56E-03
70	GO:0001682: tRNA 5'-leader removal	1.56E-03
71	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.56E-03
72	GO:0006568: tryptophan metabolic process	1.56E-03
73	GO:0010024: phytochromobilin biosynthetic process	1.56E-03
74	GO:0000373: Group II intron splicing	1.60E-03
75	GO:0048507: meristem development	1.60E-03
76	GO:0009098: leucine biosynthetic process	1.90E-03
77	GO:1900865: chloroplast RNA modification	1.90E-03
78	GO:0048586: regulation of long-day photoperiodism, flowering	2.57E-03
79	GO:0006954: inflammatory response	2.57E-03
80	GO:0033591: response to L-ascorbic acid	2.57E-03
81	GO:0090708: specification of plant organ axis polarity	2.57E-03
82	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.57E-03
83	GO:0010623: programmed cell death involved in cell development	2.57E-03
84	GO:0006352: DNA-templated transcription, initiation	2.57E-03
85	GO:0006788: heme oxidation	2.57E-03
86	GO:0006696: ergosterol biosynthetic process	2.57E-03
87	GO:0090153: regulation of sphingolipid biosynthetic process	2.57E-03
88	GO:0006415: translational termination	2.57E-03
89	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.57E-03
90	GO:0043157: response to cation stress	2.57E-03
91	GO:0005977: glycogen metabolic process	2.57E-03
92	GO:0009102: biotin biosynthetic process	3.75E-03
93	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.75E-03
94	GO:0010306: rhamnogalacturonan II biosynthetic process	3.75E-03
95	GO:0009226: nucleotide-sugar biosynthetic process	3.75E-03
96	GO:0046739: transport of virus in multicellular host	3.75E-03
97	GO:0019048: modulation by virus of host morphology or physiology	3.75E-03
98	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.75E-03
99	GO:0051016: barbed-end actin filament capping	3.75E-03
100	GO:0042989: sequestering of actin monomers	3.75E-03
101	GO:0031048: chromatin silencing by small RNA	3.75E-03
102	GO:0090308: regulation of methylation-dependent chromatin silencing	3.75E-03
103	GO:0016556: mRNA modification	3.75E-03
104	GO:0009067: aspartate family amino acid biosynthetic process	3.75E-03
105	GO:0010071: root meristem specification	3.75E-03
106	GO:0051513: regulation of monopolar cell growth	3.75E-03
107	GO:0007231: osmosensory signaling pathway	3.75E-03
108	GO:0015995: chlorophyll biosynthetic process	4.08E-03
109	GO:0030104: water homeostasis	5.06E-03
110	GO:0033500: carbohydrate homeostasis	5.06E-03
111	GO:0042274: ribosomal small subunit biogenesis	5.06E-03
112	GO:0048442: sepal development	5.06E-03
113	GO:0006661: phosphatidylinositol biosynthetic process	5.06E-03
114	GO:2000306: positive regulation of photomorphogenesis	5.06E-03
115	GO:0051567: histone H3-K9 methylation	5.06E-03
116	GO:0010508: positive regulation of autophagy	5.06E-03
117	GO:0010021: amylopectin biosynthetic process	5.06E-03
118	GO:0008295: spermidine biosynthetic process	5.06E-03
119	GO:0010109: regulation of photosynthesis	5.06E-03
120	GO:0016131: brassinosteroid metabolic process	6.51E-03
121	GO:0032876: negative regulation of DNA endoreduplication	6.51E-03
122	GO:0030041: actin filament polymerization	6.51E-03
123	GO:0032543: mitochondrial translation	6.51E-03
124	GO:0009107: lipoate biosynthetic process	6.51E-03
125	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.08E-03
126	GO:0006655: phosphatidylglycerol biosynthetic process	8.08E-03
127	GO:0009959: negative gravitropism	8.08E-03
128	GO:0042793: transcription from plastid promoter	8.08E-03
129	GO:0010190: cytochrome b6f complex assembly	8.08E-03
130	GO:0016554: cytidine to uridine editing	8.08E-03
131	GO:0016458: gene silencing	8.08E-03
132	GO:0032973: amino acid export	8.08E-03
133	GO:0000741: karyogamy	8.08E-03
134	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	8.08E-03
135	GO:0010584: pollen exine formation	8.39E-03
136	GO:0055114: oxidation-reduction process	9.00E-03
137	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.10E-03
138	GO:2000067: regulation of root morphogenesis	9.78E-03
139	GO:0042372: phylloquinone biosynthetic process	9.78E-03
140	GO:0010076: maintenance of floral meristem identity	9.78E-03
141	GO:0009082: branched-chain amino acid biosynthetic process	9.78E-03
142	GO:0017148: negative regulation of translation	9.78E-03
143	GO:0048280: vesicle fusion with Golgi apparatus	9.78E-03
144	GO:0009099: valine biosynthetic process	9.78E-03
145	GO:0030488: tRNA methylation	9.78E-03
146	GO:0010189: vitamin E biosynthetic process	9.78E-03
147	GO:0009088: threonine biosynthetic process	9.78E-03
148	GO:0080086: stamen filament development	9.78E-03
149	GO:0009648: photoperiodism	9.78E-03
150	GO:0040008: regulation of growth	1.03E-02
151	GO:0010305: leaf vascular tissue pattern formation	1.06E-02
152	GO:0048868: pollen tube development	1.06E-02
153	GO:0009741: response to brassinosteroid	1.06E-02
154	GO:0009646: response to absence of light	1.14E-02
155	GO:0009395: phospholipid catabolic process	1.16E-02
156	GO:0010098: suspensor development	1.16E-02
157	GO:0043090: amino acid import	1.16E-02
158	GO:0051693: actin filament capping	1.16E-02
159	GO:0048437: floral organ development	1.16E-02
160	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.16E-02
161	GO:0006400: tRNA modification	1.16E-02
162	GO:0051510: regulation of unidimensional cell growth	1.16E-02
163	GO:0008654: phospholipid biosynthetic process	1.23E-02
164	GO:0000302: response to reactive oxygen species	1.32E-02
165	GO:0048564: photosystem I assembly	1.35E-02
166	GO:0006605: protein targeting	1.35E-02
167	GO:0032875: regulation of DNA endoreduplication	1.35E-02
168	GO:2000070: regulation of response to water deprivation	1.35E-02
169	GO:0042255: ribosome assembly	1.35E-02
170	GO:0046620: regulation of organ growth	1.35E-02
171	GO:0006353: DNA-templated transcription, termination	1.35E-02
172	GO:0055075: potassium ion homeostasis	1.35E-02
173	GO:0070413: trehalose metabolism in response to stress	1.35E-02
174	GO:0007166: cell surface receptor signaling pathway	1.35E-02
175	GO:0006875: cellular metal ion homeostasis	1.35E-02
176	GO:0000105: histidine biosynthetic process	1.35E-02
177	GO:0032502: developmental process	1.41E-02
178	GO:0015996: chlorophyll catabolic process	1.56E-02
179	GO:0009097: isoleucine biosynthetic process	1.56E-02
180	GO:0007186: G-protein coupled receptor signaling pathway	1.56E-02
181	GO:0032544: plastid translation	1.56E-02
182	GO:0010497: plasmodesmata-mediated intercellular transport	1.56E-02
183	GO:0098656: anion transmembrane transport	1.77E-02
184	GO:0010206: photosystem II repair	1.77E-02
185	GO:0080144: amino acid homeostasis	1.77E-02
186	GO:0000902: cell morphogenesis	1.77E-02
187	GO:0006397: mRNA processing	1.92E-02
188	GO:2000280: regulation of root development	1.99E-02
189	GO:0006779: porphyrin-containing compound biosynthetic process	1.99E-02
190	GO:0009086: methionine biosynthetic process	1.99E-02
191	GO:0031425: chloroplast RNA processing	1.99E-02
192	GO:0010029: regulation of seed germination	2.03E-02
193	GO:0009742: brassinosteroid mediated signaling pathway	2.16E-02
194	GO:0009299: mRNA transcription	2.23E-02
195	GO:0006896: Golgi to vacuole transport	2.23E-02
196	GO:0006782: protoporphyrinogen IX biosynthetic process	2.23E-02
197	GO:0048441: petal development	2.23E-02
198	GO:0030422: production of siRNA involved in RNA interference	2.23E-02
199	GO:0009089: lysine biosynthetic process via diaminopimelate	2.47E-02
200	GO:0043085: positive regulation of catalytic activity	2.47E-02
201	GO:0006816: calcium ion transport	2.47E-02
202	GO:0009773: photosynthetic electron transport in photosystem I	2.47E-02
203	GO:0010216: maintenance of DNA methylation	2.47E-02
204	GO:0005983: starch catabolic process	2.72E-02
205	GO:0016024: CDP-diacylglycerol biosynthetic process	2.72E-02
206	GO:0045037: protein import into chloroplast stroma	2.72E-02
207	GO:0010628: positive regulation of gene expression	2.98E-02
208	GO:0030036: actin cytoskeleton organization	2.98E-02
209	GO:0009691: cytokinin biosynthetic process	2.98E-02
210	GO:0009718: anthocyanin-containing compound biosynthetic process	2.98E-02
211	GO:0009725: response to hormone	2.98E-02
212	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.08E-02
213	GO:0045087: innate immune response	3.18E-02
214	GO:0009790: embryo development	3.24E-02
215	GO:0006302: double-strand break repair	3.25E-02
216	GO:0048440: carpel development	3.25E-02
217	GO:0006541: glutamine metabolic process	3.25E-02
218	GO:0007015: actin filament organization	3.25E-02
219	GO:0019853: L-ascorbic acid biosynthetic process	3.53E-02
220	GO:0090351: seedling development	3.53E-02
221	GO:0010030: positive regulation of seed germination	3.53E-02
222	GO:0070588: calcium ion transmembrane transport	3.53E-02
223	GO:0015979: photosynthesis	3.56E-02
224	GO:0006839: mitochondrial transport	3.62E-02
225	GO:0006631: fatty acid metabolic process	3.77E-02
226	GO:0000162: tryptophan biosynthetic process	3.81E-02
227	GO:0006833: water transport	3.81E-02
228	GO:0045454: cell redox homeostasis	3.82E-02
229	GO:0030150: protein import into mitochondrial matrix	4.10E-02
230	GO:0007010: cytoskeleton organization	4.10E-02
231	GO:0005992: trehalose biosynthetic process	4.10E-02
232	GO:0051302: regulation of cell division	4.40E-02
233	GO:0008299: isoprenoid biosynthetic process	4.40E-02
234	GO:0006418: tRNA aminoacylation for protein translation	4.40E-02
235	GO:0007017: microtubule-based process	4.40E-02
236	GO:0006306: DNA methylation	4.70E-02
237	GO:0048511: rhythmic process	4.70E-02
238	GO:0010431: seed maturation	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0004076: biotin synthase activity	0.00E+00
2	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
3	GO:0050613: delta14-sterol reductase activity	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0010276: phytol kinase activity	0.00E+00
6	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
7	GO:0004823: leucine-tRNA ligase activity	0.00E+00
8	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	0.00E+00
10	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
11	GO:0046905: phytoene synthase activity	0.00E+00
12	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
13	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
14	GO:0005048: signal sequence binding	0.00E+00
15	GO:0003723: RNA binding	1.91E-06
16	GO:0001872: (1->3)-beta-D-glucan binding	1.49E-04
17	GO:0004519: endonuclease activity	1.88E-04
18	GO:0016987: sigma factor activity	2.51E-04
19	GO:0016279: protein-lysine N-methyltransferase activity	2.51E-04
20	GO:0001053: plastid sigma factor activity	2.51E-04
21	GO:0004462: lactoylglutathione lyase activity	5.23E-04
22	GO:0005528: FK506 binding	6.49E-04
23	GO:0004425: indole-3-glycerol-phosphate synthase activity	7.22E-04
24	GO:0004451: isocitrate lyase activity	7.22E-04
25	GO:0016776: phosphotransferase activity, phosphate group as acceptor	7.22E-04
26	GO:0019203: carbohydrate phosphatase activity	7.22E-04
27	GO:0003984: acetolactate synthase activity	7.22E-04
28	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	7.22E-04
29	GO:0008158: hedgehog receptor activity	7.22E-04
30	GO:0008395: steroid hydroxylase activity	7.22E-04
31	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	7.22E-04
32	GO:0050308: sugar-phosphatase activity	7.22E-04
33	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	7.22E-04
34	GO:0005080: protein kinase C binding	7.22E-04
35	GO:0008242: omega peptidase activity	7.22E-04
36	GO:0004813: alanine-tRNA ligase activity	7.22E-04
37	GO:0052381: tRNA dimethylallyltransferase activity	7.22E-04
38	GO:0051996: squalene synthase activity	7.22E-04
39	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	7.22E-04
40	GO:0047134: protein-disulfide reductase activity	1.29E-03
41	GO:0004766: spermidine synthase activity	1.56E-03
42	GO:0019156: isoamylase activity	1.56E-03
43	GO:0034722: gamma-glutamyl-peptidase activity	1.56E-03
44	GO:0008805: carbon-monoxide oxygenase activity	1.56E-03
45	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	1.56E-03
46	GO:0003862: 3-isopropylmalate dehydrogenase activity	1.56E-03
47	GO:0004826: phenylalanine-tRNA ligase activity	1.56E-03
48	GO:0004412: homoserine dehydrogenase activity	1.56E-03
49	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.56E-03
50	GO:0010291: carotene beta-ring hydroxylase activity	1.56E-03
51	GO:0017118: lipoyltransferase activity	1.56E-03
52	GO:0048531: beta-1,3-galactosyltransferase activity	1.56E-03
53	GO:0003852: 2-isopropylmalate synthase activity	1.56E-03
54	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.56E-03
55	GO:0043425: bHLH transcription factor binding	1.56E-03
56	GO:0003747: translation release factor activity	1.60E-03
57	GO:0004791: thioredoxin-disulfide reductase activity	1.72E-03
58	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.43E-03
59	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.57E-03
60	GO:0004180: carboxypeptidase activity	2.57E-03
61	GO:0016992: lipoate synthase activity	2.57E-03
62	GO:0003913: DNA photolyase activity	2.57E-03
63	GO:0002161: aminoacyl-tRNA editing activity	2.57E-03
64	GO:0004148: dihydrolipoyl dehydrogenase activity	2.57E-03
65	GO:0016805: dipeptidase activity	2.57E-03
66	GO:0070402: NADPH binding	2.57E-03
67	GO:0005525: GTP binding	2.69E-03
68	GO:0003690: double-stranded DNA binding	2.93E-03
69	GO:0000049: tRNA binding	2.95E-03
70	GO:0016597: amino acid binding	3.07E-03
71	GO:0004072: aspartate kinase activity	3.75E-03
72	GO:0015086: cadmium ion transmembrane transporter activity	3.75E-03
73	GO:0016149: translation release factor activity, codon specific	3.75E-03
74	GO:0016491: oxidoreductase activity	3.75E-03
75	GO:0017172: cysteine dioxygenase activity	3.75E-03
76	GO:0048027: mRNA 5'-UTR binding	3.75E-03
77	GO:0035197: siRNA binding	3.75E-03
78	GO:0043023: ribosomal large subunit binding	3.75E-03
79	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	3.75E-03
80	GO:0016851: magnesium chelatase activity	3.75E-03
81	GO:0004300: enoyl-CoA hydratase activity	3.75E-03
82	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	3.80E-03
83	GO:0008266: poly(U) RNA binding	3.80E-03
84	GO:0080032: methyl jasmonate esterase activity	5.06E-03
85	GO:0042277: peptide binding	5.06E-03
86	GO:0004392: heme oxygenase (decyclizing) activity	5.06E-03
87	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.06E-03
88	GO:0005319: lipid transporter activity	5.06E-03
89	GO:0003924: GTPase activity	5.78E-03
90	GO:0003785: actin monomer binding	6.51E-03
91	GO:0003993: acid phosphatase activity	6.67E-03
92	GO:0080030: methyl indole-3-acetate esterase activity	8.08E-03
93	GO:0004526: ribonuclease P activity	8.08E-03
94	GO:0004556: alpha-amylase activity	8.08E-03
95	GO:0016208: AMP binding	8.08E-03
96	GO:0016688: L-ascorbate peroxidase activity	8.08E-03
97	GO:0004130: cytochrome-c peroxidase activity	8.08E-03
98	GO:0008200: ion channel inhibitor activity	8.08E-03
99	GO:2001070: starch binding	8.08E-03
100	GO:0004605: phosphatidate cytidylyltransferase activity	8.08E-03
101	GO:0003727: single-stranded RNA binding	8.39E-03
102	GO:0008195: phosphatidate phosphatase activity	9.78E-03
103	GO:0003730: mRNA 3'-UTR binding	9.78E-03
104	GO:0004656: procollagen-proline 4-dioxygenase activity	9.78E-03
105	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	9.78E-03
106	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.92E-03
107	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.07E-02
108	GO:0050662: coenzyme binding	1.14E-02
109	GO:0015103: inorganic anion transmembrane transporter activity	1.16E-02
110	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.28E-02
111	GO:0008312: 7S RNA binding	1.35E-02
112	GO:0043022: ribosome binding	1.35E-02
113	GO:0004033: aldo-keto reductase (NADP) activity	1.35E-02
114	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.77E-02
115	GO:0015035: protein disulfide oxidoreductase activity	2.09E-02
116	GO:0008047: enzyme activator activity	2.23E-02
117	GO:0015020: glucuronosyltransferase activity	2.23E-02
118	GO:0004805: trehalose-phosphatase activity	2.23E-02
119	GO:0030247: polysaccharide binding	2.26E-02
120	GO:0005089: Rho guanyl-nucleotide exchange factor activity	2.47E-02
121	GO:0019843: rRNA binding	2.67E-02
122	GO:0004521: endoribonuclease activity	2.72E-02
123	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.76E-02
124	GO:0004222: metalloendopeptidase activity	2.76E-02
125	GO:0009982: pseudouridine synthase activity	2.98E-02
126	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.98E-02
127	GO:0005315: inorganic phosphate transmembrane transporter activity	2.98E-02
128	GO:0015266: protein channel activity	2.98E-02
129	GO:0031072: heat shock protein binding	2.98E-02
130	GO:0005262: calcium channel activity	2.98E-02
131	GO:0003746: translation elongation factor activity	3.18E-02
132	GO:0003697: single-stranded DNA binding	3.18E-02
133	GO:0003824: catalytic activity	3.39E-02
134	GO:0008146: sulfotransferase activity	3.53E-02
135	GO:0051536: iron-sulfur cluster binding	4.10E-02
136	GO:0031418: L-ascorbic acid binding	4.10E-02
137	GO:0004176: ATP-dependent peptidase activity	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0005948: acetolactate synthase complex	0.00E+00
4	GO:0009507: chloroplast	3.64E-41
5	GO:0009570: chloroplast stroma	8.23E-14
6	GO:0009941: chloroplast envelope	4.71E-06
7	GO:0080085: signal recognition particle, chloroplast targeting	2.21E-05
8	GO:0031969: chloroplast membrane	1.97E-04
9	GO:0009508: plastid chromosome	3.58E-04
10	GO:0009543: chloroplast thylakoid lumen	3.74E-04
11	GO:0009579: thylakoid	3.97E-04
12	GO:0009295: nucleoid	4.56E-04
13	GO:0030529: intracellular ribonucleoprotein complex	5.48E-04
14	GO:0009535: chloroplast thylakoid membrane	5.50E-04
15	GO:0043190: ATP-binding cassette (ABC) transporter complex	7.22E-04
16	GO:0009501: amyloplast	1.10E-03
17	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.34E-03
18	GO:0008290: F-actin capping protein complex	1.56E-03
19	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.56E-03
20	GO:0009513: etioplast	1.56E-03
21	GO:0000778: condensed nuclear chromosome kinetochore	1.56E-03
22	GO:0042644: chloroplast nucleoid	1.60E-03
23	GO:0009528: plastid inner membrane	2.57E-03
24	GO:0010007: magnesium chelatase complex	2.57E-03
25	GO:0009509: chromoplast	2.57E-03
26	GO:0042646: plastid nucleoid	3.75E-03
27	GO:0005719: nuclear euchromatin	3.75E-03
28	GO:0015630: microtubule cytoskeleton	3.75E-03
29	GO:0009706: chloroplast inner membrane	4.78E-03
30	GO:0030663: COPI-coated vesicle membrane	5.06E-03
31	GO:0009527: plastid outer membrane	5.06E-03
32	GO:0042651: thylakoid membrane	5.84E-03
33	GO:0009654: photosystem II oxygen evolving complex	5.84E-03
34	GO:0009532: plastid stroma	6.43E-03
35	GO:0043231: intracellular membrane-bounded organelle	7.01E-03
36	GO:0031977: thylakoid lumen	7.87E-03
37	GO:0009534: chloroplast thylakoid	9.51E-03
38	GO:0042807: central vacuole	1.16E-02
39	GO:0019898: extrinsic component of membrane	1.23E-02
40	GO:0031305: integral component of mitochondrial inner membrane	1.35E-02
41	GO:0048226: Casparian strip	1.35E-02
42	GO:0012507: ER to Golgi transport vesicle membrane	1.35E-02
43	GO:0000326: protein storage vacuole	1.56E-02
44	GO:0046658: anchored component of plasma membrane	1.69E-02
45	GO:0010319: stromule	1.70E-02
46	GO:0005720: nuclear heterochromatin	1.77E-02
47	GO:0005680: anaphase-promoting complex	1.77E-02
48	GO:0009536: plastid	1.84E-02
49	GO:0016604: nuclear body	1.99E-02
50	GO:0015030: Cajal body	1.99E-02
51	GO:0030125: clathrin vesicle coat	2.23E-02
52	GO:0000418: DNA-directed RNA polymerase IV complex	2.23E-02
53	GO:0005884: actin filament	2.47E-02
54	GO:0009707: chloroplast outer membrane	2.50E-02
55	GO:0000311: plastid large ribosomal subunit	2.72E-02
56	GO:0005938: cell cortex	2.98E-02
57	GO:0030095: chloroplast photosystem II	3.25E-02
58	GO:0030176: integral component of endoplasmic reticulum membrane	3.53E-02
59	GO:0005759: mitochondrial matrix	3.55E-02
60	GO:0009705: plant-type vacuole membrane	3.98E-02