GO Enrichment Analysis of Co-expressed Genes with
AT4G11260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0036258: multivesicular body assembly | 0.00E+00 |
| 2 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 3 | GO:0009173: pyrimidine ribonucleoside monophosphate metabolic process | 0.00E+00 |
| 4 | GO:0070676: intralumenal vesicle formation | 1.23E-06 |
| 5 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.40E-06 |
| 6 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.25E-06 |
| 7 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.51E-05 |
| 8 | GO:0009553: embryo sac development | 1.30E-04 |
| 9 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.50E-04 |
| 10 | GO:0010498: proteasomal protein catabolic process | 1.95E-04 |
| 11 | GO:0055074: calcium ion homeostasis | 1.95E-04 |
| 12 | GO:0045039: protein import into mitochondrial inner membrane | 1.95E-04 |
| 13 | GO:0042147: retrograde transport, endosome to Golgi | 1.97E-04 |
| 14 | GO:0002679: respiratory burst involved in defense response | 2.85E-04 |
| 15 | GO:0010255: glucose mediated signaling pathway | 2.85E-04 |
| 16 | GO:0071786: endoplasmic reticulum tubular network organization | 2.85E-04 |
| 17 | GO:0006515: misfolded or incompletely synthesized protein catabolic process | 2.85E-04 |
| 18 | GO:0046686: response to cadmium ion | 3.69E-04 |
| 19 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.84E-04 |
| 20 | GO:0033356: UDP-L-arabinose metabolic process | 3.84E-04 |
| 21 | GO:0051205: protein insertion into membrane | 3.84E-04 |
| 22 | GO:0010363: regulation of plant-type hypersensitive response | 3.84E-04 |
| 23 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.87E-04 |
| 24 | GO:0005513: detection of calcium ion | 4.88E-04 |
| 25 | GO:0006461: protein complex assembly | 4.88E-04 |
| 26 | GO:0042176: regulation of protein catabolic process | 5.98E-04 |
| 27 | GO:0050665: hydrogen peroxide biosynthetic process | 5.98E-04 |
| 28 | GO:0001731: formation of translation preinitiation complex | 5.98E-04 |
| 29 | GO:0009612: response to mechanical stimulus | 7.13E-04 |
| 30 | GO:0048280: vesicle fusion with Golgi apparatus | 7.13E-04 |
| 31 | GO:0009854: oxidative photosynthetic carbon pathway | 7.13E-04 |
| 32 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 8.33E-04 |
| 33 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.57E-04 |
| 34 | GO:0048766: root hair initiation | 9.57E-04 |
| 35 | GO:0050821: protein stabilization | 9.57E-04 |
| 36 | GO:0009932: cell tip growth | 1.09E-03 |
| 37 | GO:0015031: protein transport | 1.40E-03 |
| 38 | GO:0006896: Golgi to vacuole transport | 1.51E-03 |
| 39 | GO:0048765: root hair cell differentiation | 1.66E-03 |
| 40 | GO:0046856: phosphatidylinositol dephosphorylation | 1.66E-03 |
| 41 | GO:0007034: vacuolar transport | 2.14E-03 |
| 42 | GO:0006446: regulation of translational initiation | 2.14E-03 |
| 43 | GO:0010053: root epidermal cell differentiation | 2.31E-03 |
| 44 | GO:0007031: peroxisome organization | 2.31E-03 |
| 45 | GO:0034976: response to endoplasmic reticulum stress | 2.49E-03 |
| 46 | GO:0000027: ribosomal large subunit assembly | 2.67E-03 |
| 47 | GO:0007005: mitochondrion organization | 3.23E-03 |
| 48 | GO:0080092: regulation of pollen tube growth | 3.23E-03 |
| 49 | GO:0034220: ion transmembrane transport | 4.04E-03 |
| 50 | GO:0048868: pollen tube development | 4.25E-03 |
| 51 | GO:0006623: protein targeting to vacuole | 4.68E-03 |
| 52 | GO:0010183: pollen tube guidance | 4.68E-03 |
| 53 | GO:0055072: iron ion homeostasis | 4.68E-03 |
| 54 | GO:0006891: intra-Golgi vesicle-mediated transport | 4.91E-03 |
| 55 | GO:0009630: gravitropism | 5.13E-03 |
| 56 | GO:0009567: double fertilization forming a zygote and endosperm | 5.60E-03 |
| 57 | GO:0009651: response to salt stress | 6.08E-03 |
| 58 | GO:0045454: cell redox homeostasis | 6.23E-03 |
| 59 | GO:0009816: defense response to bacterium, incompatible interaction | 6.57E-03 |
| 60 | GO:0009817: defense response to fungus, incompatible interaction | 7.60E-03 |
| 61 | GO:0030244: cellulose biosynthetic process | 7.60E-03 |
| 62 | GO:0009832: plant-type cell wall biogenesis | 7.87E-03 |
| 63 | GO:0010043: response to zinc ion | 8.41E-03 |
| 64 | GO:0006839: mitochondrial transport | 9.82E-03 |
| 65 | GO:0009846: pollen germination | 1.26E-02 |
| 66 | GO:0009555: pollen development | 1.37E-02 |
| 67 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 68 | GO:0009626: plant-type hypersensitive response | 1.56E-02 |
| 69 | GO:0006457: protein folding | 1.77E-02 |
| 70 | GO:0006413: translational initiation | 2.38E-02 |
| 71 | GO:0042742: defense response to bacterium | 2.77E-02 |
| 72 | GO:0009617: response to bacterium | 2.84E-02 |
| 73 | GO:0009860: pollen tube growth | 3.60E-02 |
| 74 | GO:0006810: transport | 4.06E-02 |
| 75 | GO:0016192: vesicle-mediated transport | 4.13E-02 |
| 76 | GO:0006886: intracellular protein transport | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 1.94E-08 |
| 3 | GO:0036402: proteasome-activating ATPase activity | 6.25E-06 |
| 4 | GO:0008233: peptidase activity | 6.13E-05 |
| 5 | GO:0017025: TBP-class protein binding | 8.62E-05 |
| 6 | GO:0004190: aspartic-type endopeptidase activity | 8.62E-05 |
| 7 | GO:0043130: ubiquitin binding | 1.10E-04 |
| 8 | GO:0004127: cytidylate kinase activity | 1.13E-04 |
| 9 | GO:0070361: mitochondrial light strand promoter anti-sense binding | 1.13E-04 |
| 10 | GO:0051879: Hsp90 protein binding | 1.13E-04 |
| 11 | GO:0009041: uridylate kinase activity | 2.85E-04 |
| 12 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 13 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 2.85E-04 |
| 14 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 2.85E-04 |
| 15 | GO:0008891: glycolate oxidase activity | 3.84E-04 |
| 16 | GO:0031593: polyubiquitin binding | 5.98E-04 |
| 17 | GO:0004656: procollagen-proline 4-dioxygenase activity | 7.13E-04 |
| 18 | GO:0030234: enzyme regulator activity | 1.51E-03 |
| 19 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 1.98E-03 |
| 20 | GO:0031418: L-ascorbic acid binding | 2.67E-03 |
| 21 | GO:0043424: protein histidine kinase binding | 2.85E-03 |
| 22 | GO:0004176: ATP-dependent peptidase activity | 3.04E-03 |
| 23 | GO:0003756: protein disulfide isomerase activity | 3.63E-03 |
| 24 | GO:0047134: protein-disulfide reductase activity | 3.83E-03 |
| 25 | GO:0010181: FMN binding | 4.47E-03 |
| 26 | GO:0004791: thioredoxin-disulfide reductase activity | 4.47E-03 |
| 27 | GO:0016853: isomerase activity | 4.47E-03 |
| 28 | GO:0004872: receptor activity | 4.68E-03 |
| 29 | GO:0004518: nuclease activity | 5.13E-03 |
| 30 | GO:0015250: water channel activity | 6.32E-03 |
| 31 | GO:0008236: serine-type peptidase activity | 7.34E-03 |
| 32 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.60E-03 |
| 33 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.96E-03 |
| 34 | GO:0003746: translation elongation factor activity | 8.96E-03 |
| 35 | GO:0000149: SNARE binding | 9.53E-03 |
| 36 | GO:0005484: SNAP receptor activity | 1.07E-02 |
| 37 | GO:0035091: phosphatidylinositol binding | 1.13E-02 |
| 38 | GO:0005515: protein binding | 1.17E-02 |
| 39 | GO:0016887: ATPase activity | 1.19E-02 |
| 40 | GO:0000166: nucleotide binding | 1.37E-02 |
| 41 | GO:0016787: hydrolase activity | 1.40E-02 |
| 42 | GO:0051082: unfolded protein binding | 1.70E-02 |
| 43 | GO:0004252: serine-type endopeptidase activity | 2.14E-02 |
| 44 | GO:0008565: protein transporter activity | 2.26E-02 |
| 45 | GO:0005509: calcium ion binding | 2.56E-02 |
| 46 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 47 | GO:0042802: identical protein binding | 2.97E-02 |
| 48 | GO:0005524: ATP binding | 3.11E-02 |
| 49 | GO:0000287: magnesium ion binding | 3.37E-02 |
| 50 | GO:0004722: protein serine/threonine phosphatase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019867: outer membrane | 0.00E+00 |
| 2 | GO:0000502: proteasome complex | 9.96E-12 |
| 3 | GO:0005839: proteasome core complex | 1.94E-08 |
| 4 | GO:0031597: cytosolic proteasome complex | 9.07E-06 |
| 5 | GO:0031595: nuclear proteasome complex | 1.25E-05 |
| 6 | GO:0005829: cytosol | 1.62E-05 |
| 7 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.67E-05 |
| 8 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.34E-05 |
| 9 | GO:0031902: late endosome membrane | 4.53E-05 |
| 10 | GO:0009510: plasmodesmatal desmotubule | 4.60E-05 |
| 11 | GO:0005774: vacuolar membrane | 5.76E-05 |
| 12 | GO:0071782: endoplasmic reticulum tubular network | 2.85E-04 |
| 13 | GO:0005789: endoplasmic reticulum membrane | 3.56E-04 |
| 14 | GO:0030660: Golgi-associated vesicle membrane | 3.84E-04 |
| 15 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 3.84E-04 |
| 16 | GO:0005788: endoplasmic reticulum lumen | 4.38E-04 |
| 17 | GO:0000813: ESCRT I complex | 4.88E-04 |
| 18 | GO:0030140: trans-Golgi network transport vesicle | 5.98E-04 |
| 19 | GO:0016282: eukaryotic 43S preinitiation complex | 5.98E-04 |
| 20 | GO:0030904: retromer complex | 5.98E-04 |
| 21 | GO:0033290: eukaryotic 48S preinitiation complex | 7.13E-04 |
| 22 | GO:0000815: ESCRT III complex | 7.13E-04 |
| 23 | GO:0012507: ER to Golgi transport vesicle membrane | 9.57E-04 |
| 24 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.09E-03 |
| 25 | GO:0005765: lysosomal membrane | 1.66E-03 |
| 26 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.66E-03 |
| 27 | GO:0005770: late endosome | 4.25E-03 |
| 28 | GO:0009504: cell plate | 4.68E-03 |
| 29 | GO:0009506: plasmodesma | 4.83E-03 |
| 30 | GO:0016592: mediator complex | 5.13E-03 |
| 31 | GO:0005783: endoplasmic reticulum | 5.14E-03 |
| 32 | GO:0005778: peroxisomal membrane | 5.84E-03 |
| 33 | GO:0005743: mitochondrial inner membrane | 7.14E-03 |
| 34 | GO:0000325: plant-type vacuole | 8.41E-03 |
| 35 | GO:0005794: Golgi apparatus | 8.74E-03 |
| 36 | GO:0031201: SNARE complex | 1.01E-02 |
| 37 | GO:0005773: vacuole | 1.22E-02 |
| 38 | GO:0022626: cytosolic ribosome | 1.31E-02 |
| 39 | GO:0010008: endosome membrane | 1.52E-02 |
| 40 | GO:0005777: peroxisome | 1.57E-02 |
| 41 | GO:0005623: cell | 2.03E-02 |
| 42 | GO:0005802: trans-Golgi network | 2.19E-02 |
| 43 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 44 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.65E-02 |