Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G10910

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:0061157: mRNA destabilization0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
5GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
6GO:0009733: response to auxin1.83E-08
7GO:0009734: auxin-activated signaling pathway2.25E-06
8GO:0061062: regulation of nematode larval development1.92E-05
9GO:0009926: auxin polar transport3.45E-05
10GO:0046620: regulation of organ growth5.63E-05
11GO:0005983: starch catabolic process2.57E-04
12GO:0032958: inositol phosphate biosynthetic process6.69E-04
13GO:0015904: tetracycline transport6.69E-04
14GO:0051013: microtubule severing6.69E-04
15GO:0034757: negative regulation of iron ion transport6.69E-04
16GO:0045786: negative regulation of cell cycle6.69E-04
17GO:0000025: maltose catabolic process6.69E-04
18GO:0010726: positive regulation of hydrogen peroxide metabolic process6.69E-04
19GO:0006438: valyl-tRNA aminoacylation6.69E-04
20GO:0046520: sphingoid biosynthetic process6.69E-04
21GO:0009686: gibberellin biosynthetic process9.06E-04
22GO:0000373: Group II intron splicing1.43E-03
23GO:0010271: regulation of chlorophyll catabolic process1.44E-03
24GO:0001736: establishment of planar polarity1.44E-03
25GO:0009786: regulation of asymmetric cell division1.44E-03
26GO:0031648: protein destabilization1.44E-03
27GO:0010024: phytochromobilin biosynthetic process1.44E-03
28GO:0010583: response to cyclopentenone1.93E-03
29GO:0048829: root cap development1.98E-03
30GO:0040008: regulation of growth2.16E-03
31GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.27E-03
32GO:0009736: cytokinin-activated signaling pathway2.33E-03
33GO:0071398: cellular response to fatty acid2.38E-03
34GO:0006065: UDP-glucuronate biosynthetic process2.38E-03
35GO:0030029: actin filament-based process2.38E-03
36GO:0048575: short-day photoperiodism, flowering2.38E-03
37GO:0090506: axillary shoot meristem initiation2.38E-03
38GO:0080117: secondary growth2.38E-03
39GO:0045037: protein import into chloroplast stroma2.63E-03
40GO:0010582: floral meristem determinacy2.63E-03
41GO:0009887: animal organ morphogenesis3.39E-03
42GO:0010321: regulation of vegetative phase change3.46E-03
43GO:0010371: regulation of gibberellin biosynthetic process3.46E-03
44GO:0006020: inositol metabolic process3.46E-03
45GO:0051513: regulation of monopolar cell growth3.46E-03
46GO:0051639: actin filament network formation3.46E-03
47GO:0034059: response to anoxia3.46E-03
48GO:0007276: gamete generation3.46E-03
49GO:0009825: multidimensional cell growth3.80E-03
50GO:0006863: purine nucleobase transport4.25E-03
51GO:0000160: phosphorelay signal transduction system4.28E-03
52GO:0042991: transcription factor import into nucleus4.67E-03
53GO:0009956: radial pattern formation4.67E-03
54GO:0009755: hormone-mediated signaling pathway4.67E-03
55GO:0051764: actin crosslink formation4.67E-03
56GO:0051017: actin filament bundle assembly4.71E-03
57GO:0048364: root development5.01E-03
58GO:0006351: transcription, DNA-templated5.39E-03
59GO:0045487: gibberellin catabolic process6.01E-03
60GO:0048497: maintenance of floral organ identity6.01E-03
61GO:0009107: lipoate biosynthetic process6.01E-03
62GO:0010438: cellular response to sulfur starvation6.01E-03
63GO:0010158: abaxial cell fate specification6.01E-03
64GO:0071215: cellular response to abscisic acid stimulus6.86E-03
65GO:0003006: developmental process involved in reproduction7.46E-03
66GO:0010942: positive regulation of cell death7.46E-03
67GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity7.46E-03
68GO:0010358: leaf shaping7.46E-03
69GO:0016554: cytidine to uridine editing7.46E-03
70GO:0009913: epidermal cell differentiation7.46E-03
71GO:1902456: regulation of stomatal opening7.46E-03
72GO:0048831: regulation of shoot system development7.46E-03
73GO:0042127: regulation of cell proliferation7.47E-03
74GO:0009744: response to sucrose7.54E-03
75GO:0010087: phloem or xylem histogenesis8.77E-03
76GO:0006694: steroid biosynthetic process9.02E-03
77GO:0009942: longitudinal axis specification9.02E-03
78GO:0048509: regulation of meristem development9.02E-03
79GO:0030488: tRNA methylation9.02E-03
80GO:0009861: jasmonic acid and ethylene-dependent systemic resistance9.02E-03
81GO:0010019: chloroplast-nucleus signaling pathway9.02E-03
82GO:0031930: mitochondria-nucleus signaling pathway9.02E-03
83GO:0009741: response to brassinosteroid9.46E-03
84GO:0010305: leaf vascular tissue pattern formation9.46E-03
85GO:0009664: plant-type cell wall organization1.01E-02
86GO:0000082: G1/S transition of mitotic cell cycle1.07E-02
87GO:0010444: guard mother cell differentiation1.07E-02
88GO:0007050: cell cycle arrest1.07E-02
89GO:0010050: vegetative phase change1.07E-02
90GO:0010098: suspensor development1.07E-02
91GO:0048825: cotyledon development1.09E-02
92GO:0009739: response to gibberellin1.10E-02
93GO:0071554: cell wall organization or biogenesis1.17E-02
94GO:0009850: auxin metabolic process1.25E-02
95GO:0009704: de-etiolation1.25E-02
96GO:2000070: regulation of response to water deprivation1.25E-02
97GO:0010492: maintenance of shoot apical meristem identity1.25E-02
98GO:0009819: drought recovery1.25E-02
99GO:0006402: mRNA catabolic process1.25E-02
100GO:0010439: regulation of glucosinolate biosynthetic process1.25E-02
101GO:0042255: ribosome assembly1.25E-02
102GO:0006353: DNA-templated transcription, termination1.25E-02
103GO:0007389: pattern specification process1.43E-02
104GO:0009828: plant-type cell wall loosening1.43E-02
105GO:0019760: glucosinolate metabolic process1.43E-02
106GO:0007186: G-protein coupled receptor signaling pathway1.43E-02
107GO:0010497: plasmodesmata-mediated intercellular transport1.43E-02
108GO:0009657: plastid organization1.43E-02
109GO:0048589: developmental growth1.63E-02
110GO:0009056: catabolic process1.63E-02
111GO:0006098: pentose-phosphate shunt1.63E-02
112GO:0051865: protein autoubiquitination1.63E-02
113GO:0048507: meristem development1.63E-02
114GO:0009826: unidimensional cell growth1.70E-02
115GO:0009624: response to nematode1.74E-02
116GO:0016573: histone acetylation1.84E-02
117GO:0005982: starch metabolic process1.84E-02
118GO:0009638: phototropism1.84E-02
119GO:0006779: porphyrin-containing compound biosynthetic process1.84E-02
120GO:1900865: chloroplast RNA modification1.84E-02
121GO:0016571: histone methylation1.84E-02
122GO:0006355: regulation of transcription, DNA-templated1.97E-02
123GO:0048573: photoperiodism, flowering2.01E-02
124GO:0009870: defense response signaling pathway, resistance gene-dependent2.05E-02
125GO:0009641: shade avoidance2.05E-02
126GO:0016441: posttranscriptional gene silencing2.05E-02
127GO:0006949: syncytium formation2.05E-02
128GO:0006782: protoporphyrinogen IX biosynthetic process2.05E-02
129GO:0009750: response to fructose2.27E-02
130GO:0048765: root hair cell differentiation2.27E-02
131GO:0009682: induced systemic resistance2.27E-02
132GO:0008285: negative regulation of cell proliferation2.27E-02
133GO:0048366: leaf development2.29E-02
134GO:0006468: protein phosphorylation2.34E-02
135GO:0010311: lateral root formation2.34E-02
136GO:0010105: negative regulation of ethylene-activated signaling pathway2.51E-02
137GO:0012501: programmed cell death2.51E-02
138GO:0010152: pollen maturation2.51E-02
139GO:0016567: protein ubiquitination2.53E-02
140GO:0009691: cytokinin biosynthetic process2.75E-02
141GO:0010628: positive regulation of gene expression2.75E-02
142GO:0006006: glucose metabolic process2.75E-02
143GO:2000028: regulation of photoperiodism, flowering2.75E-02
144GO:0009725: response to hormone2.75E-02
145GO:0006094: gluconeogenesis2.75E-02
146GO:0010588: cotyledon vascular tissue pattern formation2.75E-02
147GO:0010102: lateral root morphogenesis2.75E-02
148GO:0009785: blue light signaling pathway2.75E-02
149GO:0009867: jasmonic acid mediated signaling pathway2.83E-02
150GO:0010223: secondary shoot formation2.99E-02
151GO:0010540: basipetal auxin transport2.99E-02
152GO:0009266: response to temperature stimulus2.99E-02
153GO:0006302: double-strand break repair2.99E-02
154GO:0048467: gynoecium development2.99E-02
155GO:0010020: chloroplast fission2.99E-02
156GO:0009933: meristem structural organization2.99E-02
157GO:0010207: photosystem II assembly2.99E-02
158GO:0090351: seedling development3.25E-02
159GO:0045892: negative regulation of transcription, DNA-templated3.30E-02
160GO:0006631: fatty acid metabolic process3.36E-02
161GO:0005992: trehalose biosynthetic process3.78E-02
162GO:0006338: chromatin remodeling3.78E-02
163GO:0042546: cell wall biogenesis3.79E-02
164GO:0007275: multicellular organism development4.04E-02
165GO:0019953: sexual reproduction4.05E-02
166GO:0006418: tRNA aminoacylation for protein translation4.05E-02
167GO:0043622: cortical microtubule organization4.05E-02
168GO:0016114: terpenoid biosynthetic process4.33E-02
169GO:0003333: amino acid transmembrane transport4.33E-02
170GO:0010431: seed maturation4.33E-02
171GO:0006306: DNA methylation4.33E-02
172GO:0051321: meiotic cell cycle4.33E-02
173GO:0007165: signal transduction4.56E-02
174GO:2000022: regulation of jasmonic acid mediated signaling pathway4.62E-02
175GO:0001944: vasculature development4.91E-02
176GO:0009625: response to insect4.91E-02
177GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.91E-02
178GO:0009693: ethylene biosynthetic process4.91E-02
179GO:0010082: regulation of root meristem growth4.91E-02
RankGO TermAdjusted P value
1GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
2GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
3GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
4GO:0071633: dihydroceramidase activity0.00E+00
5GO:0001872: (1->3)-beta-D-glucan binding1.31E-04
6GO:0010011: auxin binding2.23E-04
7GO:0005345: purine nucleobase transmembrane transporter activity6.40E-04
8GO:0019203: carbohydrate phosphatase activity6.69E-04
9GO:0004832: valine-tRNA ligase activity6.69E-04
10GO:0033857: diphosphoinositol-pentakisphosphate kinase activity6.69E-04
11GO:0010012: steroid 22-alpha hydroxylase activity6.69E-04
12GO:0000170: sphingosine hydroxylase activity6.69E-04
13GO:0050139: nicotinate-N-glucosyltransferase activity6.69E-04
14GO:0000829: inositol heptakisphosphate kinase activity6.69E-04
15GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity6.69E-04
16GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity6.69E-04
17GO:0005227: calcium activated cation channel activity6.69E-04
18GO:0000828: inositol hexakisphosphate kinase activity6.69E-04
19GO:0004134: 4-alpha-glucanotransferase activity6.69E-04
20GO:0008568: microtubule-severing ATPase activity6.69E-04
21GO:0052381: tRNA dimethylallyltransferase activity6.69E-04
22GO:0017118: lipoyltransferase activity1.44E-03
23GO:0045543: gibberellin 2-beta-dioxygenase activity1.44E-03
24GO:0010296: prenylcysteine methylesterase activity1.44E-03
25GO:0016415: octanoyltransferase activity1.44E-03
26GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.44E-03
27GO:0008805: carbon-monoxide oxygenase activity1.44E-03
28GO:0042284: sphingolipid delta-4 desaturase activity1.44E-03
29GO:0008493: tetracycline transporter activity1.44E-03
30GO:0009884: cytokinin receptor activity1.44E-03
31GO:0019156: isoamylase activity1.44E-03
32GO:0005034: osmosensor activity2.38E-03
33GO:0003979: UDP-glucose 6-dehydrogenase activity2.38E-03
34GO:0016707: gibberellin 3-beta-dioxygenase activity2.38E-03
35GO:0045544: gibberellin 20-oxidase activity3.46E-03
36GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.46E-03
37GO:0030247: polysaccharide binding3.52E-03
38GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.67E-03
39GO:0010328: auxin influx transmembrane transporter activity4.67E-03
40GO:0019199: transmembrane receptor protein kinase activity4.67E-03
41GO:0003700: transcription factor activity, sequence-specific DNA binding4.68E-03
42GO:0070696: transmembrane receptor protein serine/threonine kinase binding6.01E-03
43GO:0008725: DNA-3-methyladenine glycosylase activity6.01E-03
44GO:0004332: fructose-bisphosphate aldolase activity7.46E-03
45GO:0004709: MAP kinase kinase kinase activity7.46E-03
46GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity7.46E-03
47GO:0030332: cyclin binding7.46E-03
48GO:0004556: alpha-amylase activity7.46E-03
49GO:0003727: single-stranded RNA binding7.47E-03
50GO:0043621: protein self-association8.35E-03
51GO:0019900: kinase binding9.02E-03
52GO:0016832: aldehyde-lyase activity9.02E-03
53GO:0003886: DNA (cytosine-5-)-methyltransferase activity9.02E-03
54GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity9.46E-03
55GO:0004871: signal transducer activity1.10E-02
56GO:0004674: protein serine/threonine kinase activity1.13E-02
57GO:0000156: phosphorelay response regulator activity1.34E-02
58GO:0051015: actin filament binding1.34E-02
59GO:0003724: RNA helicase activity1.43E-02
60GO:0005200: structural constituent of cytoskeleton1.52E-02
61GO:0016413: O-acetyltransferase activity1.61E-02
62GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.63E-02
63GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.63E-02
64GO:0016301: kinase activity1.77E-02
65GO:0009672: auxin:proton symporter activity1.84E-02
66GO:0004673: protein histidine kinase activity2.05E-02
67GO:0004805: trehalose-phosphatase activity2.05E-02
68GO:0005096: GTPase activator activity2.34E-02
69GO:0043565: sequence-specific DNA binding2.51E-02
70GO:0000155: phosphorelay sensor kinase activity2.75E-02
71GO:0003725: double-stranded RNA binding2.75E-02
72GO:0010329: auxin efflux transmembrane transporter activity2.75E-02
73GO:0004712: protein serine/threonine/tyrosine kinase activity3.09E-02
74GO:0004190: aspartic-type endopeptidase activity3.25E-02
75GO:0008146: sulfotransferase activity3.25E-02
76GO:0003712: transcription cofactor activity3.25E-02
77GO:0051536: iron-sulfur cluster binding3.78E-02
78GO:0031418: L-ascorbic acid binding3.78E-02
79GO:0008134: transcription factor binding3.78E-02
80GO:0003677: DNA binding3.88E-02
81GO:0043424: protein histidine kinase binding4.05E-02
82GO:0033612: receptor serine/threonine kinase binding4.33E-02
83GO:0003964: RNA-directed DNA polymerase activity4.33E-02
84GO:0008408: 3'-5' exonuclease activity4.33E-02
85GO:0010333: terpene synthase activity4.33E-02
86GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.62E-02
87GO:0042802: identical protein binding4.64E-02
88GO:0004672: protein kinase activity4.79E-02
89GO:0009055: electron carrier activity4.83E-02
90GO:0030570: pectate lyase activity4.91E-02
RankGO TermAdjusted P value
1GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
2GO:0035452: extrinsic component of plastid membrane0.00E+00
3GO:0000408: EKC/KEOPS complex0.00E+00
4GO:0000791: euchromatin6.69E-04
5GO:0009986: cell surface7.92E-04
6GO:0010494: cytoplasmic stress granule1.43E-03
7GO:0030870: Mre11 complex1.44E-03
8GO:0009569: chloroplast starch grain1.44E-03
9GO:0030139: endocytic vesicle2.38E-03
10GO:0009531: secondary cell wall3.46E-03
11GO:0032585: multivesicular body membrane3.46E-03
12GO:0032432: actin filament bundle3.46E-03
13GO:0000795: synaptonemal complex6.01E-03
14GO:0015629: actin cytoskeleton6.86E-03
15GO:0005886: plasma membrane1.13E-02
16GO:0009501: amyloplast1.25E-02
17GO:0046658: anchored component of plasma membrane1.42E-02
18GO:0005884: actin filament2.27E-02
19GO:0005578: proteinaceous extracellular matrix2.75E-02
20GO:0030095: chloroplast photosystem II2.99E-02
21GO:0005875: microtubule associated complex3.51E-02
22GO:0009654: photosystem II oxygen evolving complex4.05E-02
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Gene type



Gene DE type