co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001778: plasma membrane repair	0.00E+00
2	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
3	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
4	GO:0045184: establishment of protein localization	0.00E+00
5	GO:1903224: regulation of endodermal cell differentiation	0.00E+00
6	GO:0080127: fruit septum development	0.00E+00
7	GO:1900037: regulation of cellular response to hypoxia	0.00E+00
8	GO:0046486: glycerolipid metabolic process	0.00E+00
9	GO:0006907: pinocytosis	0.00E+00
10	GO:0009658: chloroplast organization	3.52E-04
11	GO:0035987: endodermal cell differentiation	4.29E-04
12	GO:0034757: negative regulation of iron ion transport	4.29E-04
13	GO:0042659: regulation of cell fate specification	4.29E-04
14	GO:0090558: plant epidermis development	4.29E-04
15	GO:0043686: co-translational protein modification	4.29E-04
16	GO:0046620: regulation of organ growth	5.13E-04
17	GO:1900865: chloroplast RNA modification	8.83E-04
18	GO:0009786: regulation of asymmetric cell division	9.27E-04
19	GO:0046740: transport of virus in host, cell to cell	9.27E-04
20	GO:0031648: protein destabilization	9.27E-04
21	GO:0043039: tRNA aminoacylation	9.27E-04
22	GO:0006423: cysteinyl-tRNA aminoacylation	9.27E-04
23	GO:0006650: glycerophospholipid metabolic process	9.27E-04
24	GO:0010271: regulation of chlorophyll catabolic process	9.27E-04
25	GO:0006432: phenylalanyl-tRNA aminoacylation	9.27E-04
26	GO:0080009: mRNA methylation	9.27E-04
27	GO:0010582: floral meristem determinacy	1.35E-03
28	GO:0071398: cellular response to fatty acid	1.51E-03
29	GO:0030029: actin filament-based process	1.51E-03
30	GO:0045910: negative regulation of DNA recombination	1.51E-03
31	GO:0031022: nuclear migration along microfilament	1.51E-03
32	GO:0090708: specification of plant organ axis polarity	1.51E-03
33	GO:0046168: glycerol-3-phosphate catabolic process	1.51E-03
34	GO:0080117: secondary growth	1.51E-03
35	GO:0006518: peptide metabolic process	1.51E-03
36	GO:0009887: animal organ morphogenesis	1.73E-03
37	GO:0000160: phosphorelay signal transduction system	1.81E-03
38	GO:0045017: glycerolipid biosynthetic process	2.18E-03
39	GO:0051513: regulation of monopolar cell growth	2.18E-03
40	GO:0032456: endocytic recycling	2.18E-03
41	GO:0010239: chloroplast mRNA processing	2.18E-03
42	GO:0007276: gamete generation	2.18E-03
43	GO:0006072: glycerol-3-phosphate metabolic process	2.18E-03
44	GO:0006612: protein targeting to membrane	2.18E-03
45	GO:0006424: glutamyl-tRNA aminoacylation	2.18E-03
46	GO:0005992: trehalose biosynthetic process	2.40E-03
47	GO:0009755: hormone-mediated signaling pathway	2.93E-03
48	GO:0048629: trichome patterning	2.93E-03
49	GO:0030104: water homeostasis	2.93E-03
50	GO:0006021: inositol biosynthetic process	2.93E-03
51	GO:0009956: radial pattern formation	2.93E-03
52	GO:0040008: regulation of growth	3.06E-03
53	GO:0009926: auxin polar transport	3.17E-03
54	GO:0071215: cellular response to abscisic acid stimulus	3.48E-03
55	GO:0031365: N-terminal protein amino acid modification	3.76E-03
56	GO:0010438: cellular response to sulfur starvation	3.76E-03
57	GO:0010158: abaxial cell fate specification	3.76E-03
58	GO:0080110: sporopollenin biosynthetic process	3.76E-03
59	GO:0009696: salicylic acid metabolic process	3.76E-03
60	GO:0016131: brassinosteroid metabolic process	3.76E-03
61	GO:0009904: chloroplast accumulation movement	3.76E-03
62	GO:0009736: cytokinin-activated signaling pathway	4.64E-03
63	GO:0016554: cytidine to uridine editing	4.65E-03
64	GO:0006655: phosphatidylglycerol biosynthetic process	4.65E-03
65	GO:0048831: regulation of shoot system development	4.65E-03
66	GO:0003006: developmental process involved in reproduction	4.65E-03
67	GO:0009958: positive gravitropism	4.78E-03
68	GO:0007018: microtubule-based movement	5.14E-03
69	GO:0008654: phospholipid biosynthetic process	5.52E-03
70	GO:0009648: photoperiodism	5.60E-03
71	GO:2000067: regulation of root morphogenesis	5.60E-03
72	GO:0009612: response to mechanical stimulus	5.60E-03
73	GO:0031930: mitochondria-nucleus signaling pathway	5.60E-03
74	GO:0048509: regulation of meristem development	5.60E-03
75	GO:0009903: chloroplast avoidance movement	5.60E-03
76	GO:0010583: response to cyclopentenone	6.32E-03
77	GO:0080186: developmental vegetative growth	6.62E-03
78	GO:0010050: vegetative phase change	6.62E-03
79	GO:0010098: suspensor development	6.62E-03
80	GO:0009733: response to auxin	6.64E-03
81	GO:0009639: response to red or far red light	7.18E-03
82	GO:0010492: maintenance of shoot apical meristem identity	7.71E-03
83	GO:0055075: potassium ion homeostasis	7.71E-03
84	GO:0000105: histidine biosynthetic process	7.71E-03
85	GO:0009231: riboflavin biosynthetic process	7.71E-03
86	GO:0009819: drought recovery	7.71E-03
87	GO:0010439: regulation of glucosinolate biosynthetic process	7.71E-03
88	GO:0070413: trehalose metabolism in response to stress	7.71E-03
89	GO:0009850: auxin metabolic process	7.71E-03
90	GO:2000070: regulation of response to water deprivation	7.71E-03
91	GO:0009734: auxin-activated signaling pathway	8.12E-03
92	GO:0071482: cellular response to light stimulus	8.84E-03
93	GO:0032544: plastid translation	8.84E-03
94	GO:0009627: systemic acquired resistance	9.58E-03
95	GO:0009056: catabolic process	1.00E-02
96	GO:0051865: protein autoubiquitination	1.00E-02
97	GO:0048507: meristem development	1.00E-02
98	GO:0000373: Group II intron splicing	1.00E-02
99	GO:0009098: leucine biosynthetic process	1.13E-02
100	GO:0010018: far-red light signaling pathway	1.13E-02
101	GO:2000280: regulation of root development	1.13E-02
102	GO:0016571: histone methylation	1.13E-02
103	GO:0016573: histone acetylation	1.13E-02
104	GO:0009790: embryo development	1.18E-02
105	GO:0045892: negative regulation of transcription, DNA-templated	1.19E-02
106	GO:0048829: root cap development	1.26E-02
107	GO:0009641: shade avoidance	1.26E-02
108	GO:0006298: mismatch repair	1.26E-02
109	GO:0010192: mucilage biosynthetic process	1.26E-02
110	GO:0010629: negative regulation of gene expression	1.26E-02
111	GO:0006355: regulation of transcription, DNA-templated	1.33E-02
112	GO:0009682: induced systemic resistance	1.40E-02
113	GO:0009867: jasmonic acid mediated signaling pathway	1.43E-02
114	GO:0009451: RNA modification	1.51E-02
115	GO:0006790: sulfur compound metabolic process	1.54E-02
116	GO:0016024: CDP-diacylglycerol biosynthetic process	1.54E-02
117	GO:0045037: protein import into chloroplast stroma	1.54E-02
118	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.54E-02
119	GO:0010102: lateral root morphogenesis	1.69E-02
120	GO:0009691: cytokinin biosynthetic process	1.69E-02
121	GO:0010540: basipetal auxin transport	1.84E-02
122	GO:0009266: response to temperature stimulus	1.84E-02
123	GO:0006302: double-strand break repair	1.84E-02
124	GO:0048467: gynoecium development	1.84E-02
125	GO:0010020: chloroplast fission	1.84E-02
126	GO:0009933: meristem structural organization	1.84E-02
127	GO:0042546: cell wall biogenesis	1.92E-02
128	GO:0046854: phosphatidylinositol phosphorylation	1.99E-02
129	GO:0009825: multidimensional cell growth	1.99E-02
130	GO:0090351: seedling development	1.99E-02
131	GO:0009636: response to toxic substance	2.07E-02
132	GO:0009965: leaf morphogenesis	2.07E-02
133	GO:0006863: purine nucleobase transport	2.15E-02
134	GO:0009833: plant-type primary cell wall biogenesis	2.15E-02
135	GO:0006833: water transport	2.15E-02
136	GO:0042753: positive regulation of circadian rhythm	2.15E-02
137	GO:0030150: protein import into mitochondrial matrix	2.32E-02
138	GO:0006338: chromatin remodeling	2.32E-02
139	GO:0007010: cytoskeleton organization	2.32E-02
140	GO:0051302: regulation of cell division	2.49E-02
141	GO:0006418: tRNA aminoacylation for protein translation	2.49E-02
142	GO:0006351: transcription, DNA-templated	2.60E-02
143	GO:0051321: meiotic cell cycle	2.66E-02
144	GO:0016226: iron-sulfur cluster assembly	2.84E-02
145	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.84E-02
146	GO:0007005: mitochondrion organization	2.84E-02
147	GO:0009625: response to insect	3.02E-02
148	GO:0009693: ethylene biosynthetic process	3.02E-02
149	GO:0009686: gibberellin biosynthetic process	3.02E-02
150	GO:0010082: regulation of root meristem growth	3.02E-02
151	GO:0009294: DNA mediated transformation	3.02E-02
152	GO:0009793: embryo development ending in seed dormancy	3.03E-02
153	GO:0010584: pollen exine formation	3.20E-02
154	GO:0006284: base-excision repair	3.20E-02
155	GO:0042127: regulation of cell proliferation	3.20E-02
156	GO:0016117: carotenoid biosynthetic process	3.39E-02
157	GO:0070417: cellular response to cold	3.39E-02
158	GO:0010087: phloem or xylem histogenesis	3.58E-02
159	GO:0000271: polysaccharide biosynthetic process	3.58E-02
160	GO:0008033: tRNA processing	3.58E-02
161	GO:0009416: response to light stimulus	3.73E-02
162	GO:0010182: sugar mediated signaling pathway	3.78E-02
163	GO:0009741: response to brassinosteroid	3.78E-02
164	GO:0010268: brassinosteroid homeostasis	3.78E-02
165	GO:0045489: pectin biosynthetic process	3.78E-02
166	GO:0010305: leaf vascular tissue pattern formation	3.78E-02
167	GO:0006814: sodium ion transport	3.98E-02
168	GO:0071555: cell wall organization	3.99E-02
169	GO:0071554: cell wall organization or biogenesis	4.39E-02
170	GO:0000302: response to reactive oxygen species	4.39E-02
171	GO:0032502: developmental process	4.60E-02
172	GO:0016032: viral process	4.60E-02
173	GO:0019761: glucosinolate biosynthetic process	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0004401: histidinol-phosphatase activity	0.00E+00
4	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
5	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
6	GO:0008805: carbon-monoxide oxygenase activity	8.17E-06
7	GO:0001872: (1->3)-beta-D-glucan binding	6.13E-05
8	GO:0010347: L-galactose-1-phosphate phosphatase activity	4.29E-04
9	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	4.29E-04
10	GO:0005227: calcium activated cation channel activity	4.29E-04
11	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	4.29E-04
12	GO:0004818: glutamate-tRNA ligase activity	4.29E-04
13	GO:0042586: peptide deformylase activity	4.29E-04
14	GO:0052381: tRNA dimethylallyltransferase activity	4.29E-04
15	GO:0008395: steroid hydroxylase activity	4.29E-04
16	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	4.29E-04
17	GO:0003852: 2-isopropylmalate synthase activity	9.27E-04
18	GO:0010296: prenylcysteine methylesterase activity	9.27E-04
19	GO:0004047: aminomethyltransferase activity	9.27E-04
20	GO:0052832: inositol monophosphate 3-phosphatase activity	9.27E-04
21	GO:0004817: cysteine-tRNA ligase activity	9.27E-04
22	GO:0008934: inositol monophosphate 1-phosphatase activity	9.27E-04
23	GO:0052833: inositol monophosphate 4-phosphatase activity	9.27E-04
24	GO:0004826: phenylalanine-tRNA ligase activity	9.27E-04
25	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	9.27E-04
26	GO:0050736: O-malonyltransferase activity	9.27E-04
27	GO:1901981: phosphatidylinositol phosphate binding	9.27E-04
28	GO:0009884: cytokinin receptor activity	9.27E-04
29	GO:0004805: trehalose-phosphatase activity	1.03E-03
30	GO:0003723: RNA binding	1.14E-03
31	GO:0000049: tRNA binding	1.35E-03
32	GO:0004519: endonuclease activity	1.41E-03
33	GO:0005034: osmosensor activity	1.51E-03
34	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.51E-03
35	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.51E-03
36	GO:0080031: methyl salicylate esterase activity	2.18E-03
37	GO:0008508: bile acid:sodium symporter activity	2.18E-03
38	GO:0031418: L-ascorbic acid binding	2.40E-03
39	GO:0019199: transmembrane receptor protein kinase activity	2.93E-03
40	GO:0043621: protein self-association	3.51E-03
41	GO:0005471: ATP:ADP antiporter activity	3.76E-03
42	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.76E-03
43	GO:0008725: DNA-3-methyladenine glycosylase activity	3.76E-03
44	GO:0030983: mismatched DNA binding	4.65E-03
45	GO:0004605: phosphatidate cytidylyltransferase activity	4.65E-03
46	GO:0080030: methyl indole-3-acetate esterase activity	4.65E-03
47	GO:0004709: MAP kinase kinase kinase activity	4.65E-03
48	GO:0051117: ATPase binding	4.65E-03
49	GO:0019900: kinase binding	5.60E-03
50	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.60E-03
51	GO:0016832: aldehyde-lyase activity	5.60E-03
52	GO:0051753: mannan synthase activity	5.60E-03
53	GO:0004518: nuclease activity	6.32E-03
54	GO:0000156: phosphorelay response regulator activity	6.74E-03
55	GO:0016759: cellulose synthase activity	7.18E-03
56	GO:0016887: ATPase activity	9.58E-03
57	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.00E-02
58	GO:0030247: polysaccharide binding	1.01E-02
59	GO:0045309: protein phosphorylated amino acid binding	1.13E-02
60	GO:0004222: metalloendopeptidase activity	1.24E-02
61	GO:0004673: protein histidine kinase activity	1.26E-02
62	GO:0019904: protein domain specific binding	1.40E-02
63	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.41E-02
64	GO:0000155: phosphorelay sensor kinase activity	1.69E-02
65	GO:0009982: pseudouridine synthase activity	1.69E-02
66	GO:0015266: protein channel activity	1.69E-02
67	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.95E-02
68	GO:0008061: chitin binding	1.99E-02
69	GO:0003712: transcription cofactor activity	1.99E-02
70	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.15E-02
71	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.15E-02
72	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.15E-02
73	GO:0005528: FK506 binding	2.32E-02
74	GO:0008134: transcription factor binding	2.32E-02
75	GO:0043424: protein histidine kinase binding	2.49E-02
76	GO:0005345: purine nucleobase transmembrane transporter activity	2.49E-02
77	GO:0008408: 3'-5' exonuclease activity	2.66E-02
78	GO:0004176: ATP-dependent peptidase activity	2.66E-02
79	GO:0003777: microtubule motor activity	2.75E-02
80	GO:0005525: GTP binding	2.83E-02
81	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.84E-02
82	GO:0016301: kinase activity	3.01E-02
83	GO:0016760: cellulose synthase (UDP-forming) activity	3.02E-02
84	GO:0004812: aminoacyl-tRNA ligase activity	3.39E-02
85	GO:0003779: actin binding	3.43E-02
86	GO:0015035: protein disulfide oxidoreductase activity	3.64E-02
87	GO:0050662: coenzyme binding	3.98E-02
88	GO:0016762: xyloglucan:xyloglucosyl transferase activity	4.39E-02
89	GO:0004871: signal transducer activity	4.40E-02
90	GO:0042803: protein homodimerization activity	4.40E-02
91	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.53E-02
92	GO:0016740: transferase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0000408: EKC/KEOPS complex	0.00E+00
2	GO:0009537: proplastid	0.00E+00
3	GO:0009349: riboflavin synthase complex	0.00E+00
4	GO:0032541: cortical endoplasmic reticulum	4.29E-04
5	GO:0000791: euchromatin	4.29E-04
6	GO:0009513: etioplast	9.27E-04
7	GO:0031357: integral component of chloroplast inner membrane	9.27E-04
8	GO:0030870: Mre11 complex	9.27E-04
9	GO:0009509: chromoplast	1.51E-03
10	GO:0030139: endocytic vesicle	1.51E-03
11	GO:0032585: multivesicular body membrane	2.18E-03
12	GO:0009331: glycerol-3-phosphate dehydrogenase complex	2.18E-03
13	GO:0009898: cytoplasmic side of plasma membrane	2.93E-03
14	GO:0000795: synaptonemal complex	3.76E-03
15	GO:0005871: kinesin complex	4.10E-03
16	GO:0009986: cell surface	6.62E-03
17	GO:0048226: Casparian strip	7.71E-03
18	GO:0009501: amyloplast	7.71E-03
19	GO:0031305: integral component of mitochondrial inner membrane	7.71E-03
20	GO:0009507: chloroplast	8.39E-03
21	GO:0009707: chloroplast outer membrane	1.12E-02
22	GO:0009941: chloroplast envelope	1.32E-02
23	GO:0016602: CCAAT-binding factor complex	1.69E-02
24	GO:0030095: chloroplast photosystem II	1.84E-02
25	GO:0046658: anchored component of plasma membrane	2.09E-02
26	GO:0005875: microtubule associated complex	2.15E-02
27	GO:0009536: plastid	2.18E-02
28	GO:0009654: photosystem II oxygen evolving complex	2.49E-02
29	GO:0005886: plasma membrane	2.55E-02
30	GO:0010008: endosome membrane	3.04E-02
31	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.20E-02
32	GO:0009706: chloroplast inner membrane	3.54E-02
33	GO:0019898: extrinsic component of membrane	4.18E-02
34	GO:0009504: cell plate	4.18E-02
35	GO:0031965: nuclear membrane	4.18E-02
36	GO:0009543: chloroplast thylakoid lumen	4.42E-02
37	GO:0005623: cell	4.53E-02
38	GO:0000785: chromatin	4.60E-02