co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
2	GO:0006461: protein complex assembly	4.42E-07
3	GO:1901430: positive regulation of syringal lignin biosynthetic process	1.21E-05
4	GO:0009915: phloem sucrose loading	3.21E-05
5	GO:0045039: protein import into mitochondrial inner membrane	5.78E-05
6	GO:0010363: regulation of plant-type hypersensitive response	1.22E-04
7	GO:0051205: protein insertion into membrane	1.22E-04
8	GO:0018279: protein N-linked glycosylation via asparagine	1.59E-04
9	GO:0006564: L-serine biosynthetic process	1.59E-04
10	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.98E-04
11	GO:0010189: vitamin E biosynthetic process	2.39E-04
12	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.39E-04
13	GO:0000054: ribosomal subunit export from nucleus	2.39E-04
14	GO:0000338: protein deneddylation	2.82E-04
15	GO:0006102: isocitrate metabolic process	3.27E-04
16	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.27E-04
17	GO:0010120: camalexin biosynthetic process	3.73E-04
18	GO:0006972: hyperosmotic response	3.73E-04
19	GO:0042744: hydrogen peroxide catabolic process	4.58E-04
20	GO:0090332: stomatal closure	4.69E-04
21	GO:0009682: induced systemic resistance	5.71E-04
22	GO:0072593: reactive oxygen species metabolic process	5.71E-04
23	GO:0006820: anion transport	6.23E-04
24	GO:0042742: defense response to bacterium	6.45E-04
25	GO:0009617: response to bacterium	6.54E-04
26	GO:0009266: response to temperature stimulus	7.31E-04
27	GO:0055114: oxidation-reduction process	7.87E-04
28	GO:0009826: unidimensional cell growth	8.07E-04
29	GO:0006636: unsaturated fatty acid biosynthetic process	8.44E-04
30	GO:0034976: response to endoplasmic reticulum stress	8.44E-04
31	GO:0006952: defense response	9.79E-04
32	GO:0010089: xylem development	1.21E-03
33	GO:0009561: megagametogenesis	1.21E-03
34	GO:0042147: retrograde transport, endosome to Golgi	1.27E-03
35	GO:0006606: protein import into nucleus	1.34E-03
36	GO:0048868: pollen tube development	1.40E-03
37	GO:0009646: response to absence of light	1.47E-03
38	GO:0007165: signal transduction	1.59E-03
39	GO:0009793: embryo development ending in seed dormancy	1.82E-03
40	GO:0009567: double fertilization forming a zygote and endosperm	1.83E-03
41	GO:0009735: response to cytokinin	2.38E-03
42	GO:0006811: ion transport	2.63E-03
43	GO:0010043: response to zinc ion	2.71E-03
44	GO:0009651: response to salt stress	2.91E-03
45	GO:0006099: tricarboxylic acid cycle	2.97E-03
46	GO:0009640: photomorphogenesis	3.43E-03
47	GO:0031347: regulation of defense response	3.90E-03
48	GO:0009664: plant-type cell wall organization	4.00E-03
49	GO:0009809: lignin biosynthetic process	4.20E-03
50	GO:0009585: red, far-red light phototransduction	4.20E-03
51	GO:0051603: proteolysis involved in cellular protein catabolic process	4.30E-03
52	GO:0006096: glycolytic process	4.70E-03
53	GO:0009553: embryo sac development	5.23E-03
54	GO:0006979: response to oxidative stress	5.26E-03
55	GO:0040008: regulation of growth	7.55E-03
56	GO:0046686: response to cadmium ion	8.12E-03
57	GO:0045454: cell redox homeostasis	1.40E-02
58	GO:0006886: intracellular protein transport	1.43E-02
59	GO:0050832: defense response to fungus	1.55E-02
60	GO:0006397: mRNA processing	1.67E-02
61	GO:0009416: response to light stimulus	2.44E-02
62	GO:0009555: pollen development	2.44E-02
63	GO:0055085: transmembrane transport	2.89E-02
64	GO:0006457: protein folding	2.94E-02
65	GO:0006511: ubiquitin-dependent protein catabolic process	3.04E-02
66	GO:0071555: cell wall organization	4.04E-02
67	GO:0015031: protein transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
2	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
3	GO:0004617: phosphoglycerate dehydrogenase activity	3.21E-05
4	GO:0004449: isocitrate dehydrogenase (NAD+) activity	8.79E-05
5	GO:0004659: prenyltransferase activity	1.22E-04
6	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.22E-04
7	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.59E-04
8	GO:0004656: procollagen-proline 4-dioxygenase activity	2.39E-04
9	GO:0015288: porin activity	3.27E-04
10	GO:0008308: voltage-gated anion channel activity	3.73E-04
11	GO:0004601: peroxidase activity	8.37E-04
12	GO:0031418: L-ascorbic acid binding	9.02E-04
13	GO:0004298: threonine-type endopeptidase activity	1.02E-03
14	GO:0020037: heme binding	1.13E-03
15	GO:0003756: protein disulfide isomerase activity	1.21E-03
16	GO:0016853: isomerase activity	1.47E-03
17	GO:0016597: amino acid binding	1.98E-03
18	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.46E-03
19	GO:0050897: cobalt ion binding	2.71E-03
20	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.89E-03
21	GO:0051287: NAD binding	3.90E-03
22	GO:0005506: iron ion binding	5.13E-03
23	GO:0008026: ATP-dependent helicase activity	5.56E-03
24	GO:0008565: protein transporter activity	7.06E-03
25	GO:0008233: peptidase activity	1.22E-02
26	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.48E-02
27	GO:0003924: GTPase activity	1.62E-02
28	GO:0016301: kinase activity	2.24E-02
29	GO:0030246: carbohydrate binding	3.02E-02
30	GO:0005515: protein binding	3.07E-02
31	GO:0019825: oxygen binding	3.14E-02
32	GO:0005525: GTP binding	3.48E-02

Rank	GO Term	Adjusted P value
1	GO:0005774: vacuolar membrane	5.58E-05
2	GO:0008250: oligosaccharyltransferase complex	1.59E-04
3	GO:0030904: retromer complex	1.98E-04
4	GO:0005794: Golgi apparatus	2.62E-04
5	GO:0046930: pore complex	3.73E-04
6	GO:0005623: cell	4.15E-04
7	GO:0008180: COP9 signalosome	4.21E-04
8	GO:0009505: plant-type cell wall	8.54E-04
9	GO:0005741: mitochondrial outer membrane	1.02E-03
10	GO:0005839: proteasome core complex	1.02E-03
11	GO:0005730: nucleolus	1.23E-03
12	GO:0031902: late endosome membrane	3.24E-03
13	GO:0005618: cell wall	3.59E-03
14	GO:0000502: proteasome complex	4.20E-03
15	GO:0005635: nuclear envelope	4.40E-03
16	GO:0005622: intracellular	4.58E-03
17	GO:0005773: vacuole	5.20E-03
18	GO:0005759: mitochondrial matrix	7.30E-03
19	GO:0005789: endoplasmic reticulum membrane	7.96E-03
20	GO:0031969: chloroplast membrane	1.23E-02
21	GO:0005743: mitochondrial inner membrane	1.54E-02
22	GO:0005576: extracellular region	1.74E-02
23	GO:0048046: apoplast	1.90E-02
24	GO:0016020: membrane	2.97E-02
25	GO:0005829: cytosol	3.43E-02
26	GO:0005783: endoplasmic reticulum	3.66E-02
27	GO:0009536: plastid	4.67E-02