co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G10040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071327: cellular response to trehalose stimulus	0.00E+00
2	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
3	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:1900367: positive regulation of defense response to insect	0.00E+00
6	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
7	GO:0010324: membrane invagination	0.00E+00
8	GO:0010150: leaf senescence	5.31E-07
9	GO:2000031: regulation of salicylic acid mediated signaling pathway	8.11E-05
10	GO:0051938: L-glutamate import	1.08E-04
11	GO:0046256: 2,4,6-trinitrotoluene catabolic process	1.08E-04
12	GO:0007229: integrin-mediated signaling pathway	1.08E-04
13	GO:1901183: positive regulation of camalexin biosynthetic process	1.08E-04
14	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.52E-04
15	GO:0015802: basic amino acid transport	2.52E-04
16	GO:0010618: aerenchyma formation	2.52E-04
17	GO:0010115: regulation of abscisic acid biosynthetic process	2.52E-04
18	GO:0010271: regulation of chlorophyll catabolic process	2.52E-04
19	GO:0043091: L-arginine import	2.52E-04
20	GO:2000377: regulation of reactive oxygen species metabolic process	3.57E-04
21	GO:1900055: regulation of leaf senescence	4.19E-04
22	GO:0034051: negative regulation of plant-type hypersensitive response	4.19E-04
23	GO:1900140: regulation of seedling development	4.19E-04
24	GO:0071456: cellular response to hypoxia	4.74E-04
25	GO:0031348: negative regulation of defense response	4.74E-04
26	GO:0072583: clathrin-dependent endocytosis	6.01E-04
27	GO:0046836: glycolipid transport	6.01E-04
28	GO:0009751: response to salicylic acid	7.78E-04
29	GO:1901141: regulation of lignin biosynthetic process	7.98E-04
30	GO:0060548: negative regulation of cell death	7.98E-04
31	GO:0080142: regulation of salicylic acid biosynthetic process	7.98E-04
32	GO:0010225: response to UV-C	1.01E-03
33	GO:0009697: salicylic acid biosynthetic process	1.01E-03
34	GO:0010405: arabinogalactan protein metabolic process	1.23E-03
35	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.23E-03
36	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.23E-03
37	GO:0010942: positive regulation of cell death	1.23E-03
38	GO:0009816: defense response to bacterium, incompatible interaction	1.29E-03
39	GO:0006950: response to stress	1.43E-03
40	GO:0010310: regulation of hydrogen peroxide metabolic process	1.47E-03
41	GO:0071446: cellular response to salicylic acid stimulus	1.73E-03
42	GO:1900056: negative regulation of leaf senescence	1.73E-03
43	GO:0050829: defense response to Gram-negative bacterium	1.73E-03
44	GO:0007568: aging	1.82E-03
45	GO:0009819: drought recovery	2.00E-03
46	GO:0010099: regulation of photomorphogenesis	2.28E-03
47	GO:0030968: endoplasmic reticulum unfolded protein response	2.28E-03
48	GO:1900426: positive regulation of defense response to bacterium	2.88E-03
49	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.88E-03
50	GO:0010380: regulation of chlorophyll biosynthetic process	2.88E-03
51	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.88E-03
52	GO:0006855: drug transmembrane transport	2.97E-03
53	GO:0007064: mitotic sister chromatid cohesion	3.20E-03
54	GO:0008361: regulation of cell size	3.87E-03
55	GO:0002213: defense response to insect	3.87E-03
56	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.87E-03
57	GO:0009620: response to fungus	4.44E-03
58	GO:0046688: response to copper ion	4.96E-03
59	GO:0009742: brassinosteroid mediated signaling pathway	5.15E-03
60	GO:0006979: response to oxidative stress	5.55E-03
61	GO:0006825: copper ion transport	6.15E-03
62	GO:0009269: response to desiccation	6.56E-03
63	GO:0003333: amino acid transmembrane transport	6.56E-03
64	GO:0010017: red or far-red light signaling pathway	6.99E-03
65	GO:0016226: iron-sulfur cluster assembly	6.99E-03
66	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.99E-03
67	GO:0009625: response to insect	7.42E-03
68	GO:0070417: cellular response to cold	8.32E-03
69	GO:0000271: polysaccharide biosynthetic process	8.79E-03
70	GO:0045489: pectin biosynthetic process	9.26E-03
71	GO:0009611: response to wounding	9.45E-03
72	GO:0009646: response to absence of light	9.74E-03
73	GO:0010468: regulation of gene expression	1.00E-02
74	GO:0009617: response to bacterium	1.00E-02
75	GO:0007264: small GTPase mediated signal transduction	1.12E-02
76	GO:0016032: viral process	1.12E-02
77	GO:0019761: glucosinolate biosynthetic process	1.12E-02
78	GO:0006904: vesicle docking involved in exocytosis	1.28E-02
79	GO:0001666: response to hypoxia	1.39E-02
80	GO:0009627: systemic acquired resistance	1.51E-02
81	GO:0006468: protein phosphorylation	1.61E-02
82	GO:0010200: response to chitin	1.67E-02
83	GO:0008219: cell death	1.68E-02
84	GO:0006499: N-terminal protein myristoylation	1.80E-02
85	GO:0009407: toxin catabolic process	1.80E-02
86	GO:0048527: lateral root development	1.86E-02
87	GO:0009867: jasmonic acid mediated signaling pathway	1.99E-02
88	GO:0045087: innate immune response	1.99E-02
89	GO:0016051: carbohydrate biosynthetic process	1.99E-02
90	GO:0006887: exocytosis	2.25E-02
91	GO:0006897: endocytosis	2.25E-02
92	GO:0042742: defense response to bacterium	2.25E-02
93	GO:0009744: response to sucrose	2.38E-02
94	GO:0051707: response to other organism	2.38E-02
95	GO:0006629: lipid metabolic process	2.39E-02
96	GO:0009636: response to toxic substance	2.59E-02
97	GO:0031347: regulation of defense response	2.73E-02
98	GO:0009809: lignin biosynthetic process	2.94E-02
99	GO:0006486: protein glycosylation	2.94E-02
100	GO:0009626: plant-type hypersensitive response	3.47E-02
101	GO:0009624: response to nematode	3.78E-02
102	GO:0035556: intracellular signal transduction	4.46E-02
103	GO:0045893: positive regulation of transcription, DNA-templated	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0032050: clathrin heavy chain binding	1.08E-04
2	GO:0019707: protein-cysteine S-acyltransferase activity	1.08E-04
3	GO:0047364: desulfoglucosinolate sulfotransferase activity	2.52E-04
4	GO:0001671: ATPase activator activity	2.52E-04
5	GO:0043424: protein histidine kinase binding	3.94E-04
6	GO:0016531: copper chaperone activity	4.19E-04
7	GO:0015189: L-lysine transmembrane transporter activity	6.01E-04
8	GO:0017089: glycolipid transporter activity	6.01E-04
9	GO:0015181: arginine transmembrane transporter activity	6.01E-04
10	GO:0051861: glycolipid binding	7.98E-04
11	GO:0005313: L-glutamate transmembrane transporter activity	7.98E-04
12	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.01E-03
13	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.23E-03
14	GO:0015238: drug transmembrane transporter activity	1.66E-03
15	GO:0016301: kinase activity	1.73E-03
16	GO:0043295: glutathione binding	1.73E-03
17	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.00E-03
18	GO:0015174: basic amino acid transmembrane transporter activity	2.88E-03
19	GO:0004568: chitinase activity	3.20E-03
20	GO:0008171: O-methyltransferase activity	3.20E-03
21	GO:0008559: xenobiotic-transporting ATPase activity	3.53E-03
22	GO:0016298: lipase activity	3.55E-03
23	GO:0008378: galactosyltransferase activity	3.87E-03
24	GO:0004521: endoribonuclease activity	3.87E-03
25	GO:0005509: calcium ion binding	4.85E-03
26	GO:0008146: sulfotransferase activity	4.96E-03
27	GO:0003954: NADH dehydrogenase activity	5.75E-03
28	GO:0016758: transferase activity, transferring hexosyl groups	5.92E-03
29	GO:0051087: chaperone binding	6.15E-03
30	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.56E-03
31	GO:0004707: MAP kinase activity	6.56E-03
32	GO:0033612: receptor serine/threonine kinase binding	6.56E-03
33	GO:0004674: protein serine/threonine kinase activity	6.74E-03
34	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	6.99E-03
35	GO:0015297: antiporter activity	8.01E-03
36	GO:0019901: protein kinase binding	1.02E-02
37	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.28E-02
38	GO:0008375: acetylglucosaminyltransferase activity	1.51E-02
39	GO:0004806: triglyceride lipase activity	1.56E-02
40	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.05E-02
41	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.12E-02
42	GO:0004364: glutathione transferase activity	2.31E-02
43	GO:0051537: 2 iron, 2 sulfur cluster binding	2.52E-02
44	GO:0005198: structural molecule activity	2.59E-02
45	GO:0015171: amino acid transmembrane transporter activity	3.17E-02
46	GO:0031625: ubiquitin protein ligase binding	3.17E-02
47	GO:0004842: ubiquitin-protein transferase activity	3.36E-02
48	GO:0004672: protein kinase activity	3.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	3.24E-06
2	GO:0000138: Golgi trans cisterna	1.08E-04
3	GO:0031304: intrinsic component of mitochondrial inner membrane	2.52E-04
4	GO:0005901: caveola	2.52E-04
5	GO:0005758: mitochondrial intermembrane space	3.57E-04
6	GO:0042406: extrinsic component of endoplasmic reticulum membrane	4.19E-04
7	GO:0070062: extracellular exosome	6.01E-04
8	GO:0030125: clathrin vesicle coat	3.20E-03
9	GO:0005769: early endosome	5.35E-03
10	GO:0016021: integral component of membrane	6.55E-03
11	GO:0005773: vacuole	7.80E-03
12	GO:0046658: anchored component of plasma membrane	1.11E-02
13	GO:0000145: exocyst	1.12E-02
14	GO:0005794: Golgi apparatus	1.37E-02
15	GO:0000151: ubiquitin ligase complex	1.68E-02
16	GO:0000325: plant-type vacuole	1.86E-02
17	GO:0000786: nucleosome	1.92E-02
18	GO:0005737: cytoplasm	3.07E-02