GO Enrichment Analysis of Co-expressed Genes with
AT4G09760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 2 | GO:0006480: N-terminal protein amino acid methylation | 0.00E+00 |
| 3 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
| 4 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 5 | GO:0098586: cellular response to virus | 0.00E+00 |
| 6 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 7 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 8 | GO:0005977: glycogen metabolic process | 2.67E-06 |
| 9 | GO:0010021: amylopectin biosynthetic process | 1.18E-05 |
| 10 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.95E-05 |
| 11 | GO:0009658: chloroplast organization | 4.17E-05 |
| 12 | GO:0019252: starch biosynthetic process | 5.44E-05 |
| 13 | GO:0031426: polycistronic mRNA processing | 1.18E-04 |
| 14 | GO:0006637: acyl-CoA metabolic process | 1.18E-04 |
| 15 | GO:0000481: maturation of 5S rRNA | 1.18E-04 |
| 16 | GO:0071461: cellular response to redox state | 1.18E-04 |
| 17 | GO:0070574: cadmium ion transmembrane transport | 1.18E-04 |
| 18 | GO:1902458: positive regulation of stomatal opening | 1.18E-04 |
| 19 | GO:0010028: xanthophyll cycle | 1.18E-04 |
| 20 | GO:0034337: RNA folding | 1.18E-04 |
| 21 | GO:0051775: response to redox state | 1.18E-04 |
| 22 | GO:0051180: vitamin transport | 1.18E-04 |
| 23 | GO:0030974: thiamine pyrophosphate transport | 1.18E-04 |
| 24 | GO:0000256: allantoin catabolic process | 2.73E-04 |
| 25 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.73E-04 |
| 26 | GO:0051262: protein tetramerization | 2.73E-04 |
| 27 | GO:0046741: transport of virus in host, tissue to tissue | 2.73E-04 |
| 28 | GO:0015893: drug transport | 2.73E-04 |
| 29 | GO:0080005: photosystem stoichiometry adjustment | 2.73E-04 |
| 30 | GO:0010020: chloroplast fission | 2.87E-04 |
| 31 | GO:0010136: ureide catabolic process | 4.52E-04 |
| 32 | GO:0006760: folic acid-containing compound metabolic process | 4.52E-04 |
| 33 | GO:0000913: preprophase band assembly | 4.52E-04 |
| 34 | GO:0031022: nuclear migration along microfilament | 4.52E-04 |
| 35 | GO:0010731: protein glutathionylation | 6.47E-04 |
| 36 | GO:0043572: plastid fission | 6.47E-04 |
| 37 | GO:2001141: regulation of RNA biosynthetic process | 6.47E-04 |
| 38 | GO:0090308: regulation of methylation-dependent chromatin silencing | 6.47E-04 |
| 39 | GO:0006107: oxaloacetate metabolic process | 6.47E-04 |
| 40 | GO:0010239: chloroplast mRNA processing | 6.47E-04 |
| 41 | GO:0006145: purine nucleobase catabolic process | 6.47E-04 |
| 42 | GO:0009226: nucleotide-sugar biosynthetic process | 6.47E-04 |
| 43 | GO:0045489: pectin biosynthetic process | 7.83E-04 |
| 44 | GO:0006734: NADH metabolic process | 8.60E-04 |
| 45 | GO:0046656: folic acid biosynthetic process | 8.60E-04 |
| 46 | GO:0009904: chloroplast accumulation movement | 1.08E-03 |
| 47 | GO:0000278: mitotic cell cycle | 1.08E-03 |
| 48 | GO:0080110: sporopollenin biosynthetic process | 1.08E-03 |
| 49 | GO:0050665: hydrogen peroxide biosynthetic process | 1.33E-03 |
| 50 | GO:0010190: cytochrome b6f complex assembly | 1.33E-03 |
| 51 | GO:0046654: tetrahydrofolate biosynthetic process | 1.59E-03 |
| 52 | GO:0009903: chloroplast avoidance movement | 1.59E-03 |
| 53 | GO:0010189: vitamin E biosynthetic process | 1.59E-03 |
| 54 | GO:0009854: oxidative photosynthetic carbon pathway | 1.59E-03 |
| 55 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.59E-03 |
| 56 | GO:0009645: response to low light intensity stimulus | 1.87E-03 |
| 57 | GO:1900056: negative regulation of leaf senescence | 1.87E-03 |
| 58 | GO:0006811: ion transport | 1.94E-03 |
| 59 | GO:0009690: cytokinin metabolic process | 2.16E-03 |
| 60 | GO:0032508: DNA duplex unwinding | 2.16E-03 |
| 61 | GO:2000070: regulation of response to water deprivation | 2.16E-03 |
| 62 | GO:0006875: cellular metal ion homeostasis | 2.16E-03 |
| 63 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.46E-03 |
| 64 | GO:0071482: cellular response to light stimulus | 2.46E-03 |
| 65 | GO:0009657: plastid organization | 2.46E-03 |
| 66 | GO:0006970: response to osmotic stress | 2.63E-03 |
| 67 | GO:0098656: anion transmembrane transport | 2.78E-03 |
| 68 | GO:0048507: meristem development | 2.78E-03 |
| 69 | GO:0006810: transport | 3.08E-03 |
| 70 | GO:0009644: response to high light intensity | 3.09E-03 |
| 71 | GO:0007346: regulation of mitotic cell cycle | 3.12E-03 |
| 72 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.12E-03 |
| 73 | GO:0006352: DNA-templated transcription, initiation | 3.82E-03 |
| 74 | GO:0010216: maintenance of DNA methylation | 3.82E-03 |
| 75 | GO:0006108: malate metabolic process | 4.57E-03 |
| 76 | GO:0009767: photosynthetic electron transport chain | 4.57E-03 |
| 77 | GO:0010207: photosystem II assembly | 4.97E-03 |
| 78 | GO:0042343: indole glucosinolate metabolic process | 5.37E-03 |
| 79 | GO:0042023: DNA endoreduplication | 5.79E-03 |
| 80 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.66E-03 |
| 81 | GO:0051302: regulation of cell division | 6.66E-03 |
| 82 | GO:0003333: amino acid transmembrane transport | 7.11E-03 |
| 83 | GO:0098542: defense response to other organism | 7.11E-03 |
| 84 | GO:0009306: protein secretion | 8.53E-03 |
| 85 | GO:0010584: pollen exine formation | 8.53E-03 |
| 86 | GO:0006413: translational initiation | 8.79E-03 |
| 87 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 9.02E-03 |
| 88 | GO:0000271: polysaccharide biosynthetic process | 9.53E-03 |
| 89 | GO:0006662: glycerol ether metabolic process | 1.00E-02 |
| 90 | GO:0006520: cellular amino acid metabolic process | 1.00E-02 |
| 91 | GO:0007018: microtubule-based movement | 1.06E-02 |
| 92 | GO:0008654: phospholipid biosynthetic process | 1.11E-02 |
| 93 | GO:0055072: iron ion homeostasis | 1.11E-02 |
| 94 | GO:0009791: post-embryonic development | 1.11E-02 |
| 95 | GO:0000302: response to reactive oxygen species | 1.16E-02 |
| 96 | GO:0032502: developmental process | 1.22E-02 |
| 97 | GO:0010583: response to cyclopentenone | 1.22E-02 |
| 98 | GO:0016032: viral process | 1.22E-02 |
| 99 | GO:0000910: cytokinesis | 1.45E-02 |
| 100 | GO:0010029: regulation of seed germination | 1.57E-02 |
| 101 | GO:0018298: protein-chromophore linkage | 1.82E-02 |
| 102 | GO:0009910: negative regulation of flower development | 2.02E-02 |
| 103 | GO:0016051: carbohydrate biosynthetic process | 2.16E-02 |
| 104 | GO:0034599: cellular response to oxidative stress | 2.23E-02 |
| 105 | GO:0006099: tricarboxylic acid cycle | 2.23E-02 |
| 106 | GO:0006839: mitochondrial transport | 2.37E-02 |
| 107 | GO:0030001: metal ion transport | 2.37E-02 |
| 108 | GO:0042546: cell wall biogenesis | 2.66E-02 |
| 109 | GO:0009636: response to toxic substance | 2.81E-02 |
| 110 | GO:0009409: response to cold | 3.78E-02 |
| 111 | GO:0016569: covalent chromatin modification | 3.94E-02 |
| 112 | GO:0009624: response to nematode | 4.11E-02 |
| 113 | GO:0051726: regulation of cell cycle | 4.28E-02 |
| 114 | GO:0005975: carbohydrate metabolic process | 4.35E-02 |
| 115 | GO:0035556: intracellular signal transduction | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010276: phytol kinase activity | 0.00E+00 |
| 2 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 3 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0019156: isoamylase activity | 7.07E-07 |
| 7 | GO:0016491: oxidoreductase activity | 2.11E-05 |
| 8 | GO:0004556: alpha-amylase activity | 2.95E-05 |
| 9 | GO:0008746: NAD(P)+ transhydrogenase activity | 1.18E-04 |
| 10 | GO:0004328: formamidase activity | 1.18E-04 |
| 11 | GO:0005227: calcium activated cation channel activity | 1.18E-04 |
| 12 | GO:0090422: thiamine pyrophosphate transporter activity | 1.18E-04 |
| 13 | GO:0004150: dihydroneopterin aldolase activity | 2.73E-04 |
| 14 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.73E-04 |
| 15 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 2.73E-04 |
| 16 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.73E-04 |
| 17 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 2.73E-04 |
| 18 | GO:0004848: ureidoglycolate hydrolase activity | 4.52E-04 |
| 19 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 6.47E-04 |
| 20 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 21 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 6.47E-04 |
| 22 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 6.47E-04 |
| 23 | GO:0048027: mRNA 5'-UTR binding | 6.47E-04 |
| 24 | GO:0015086: cadmium ion transmembrane transporter activity | 6.47E-04 |
| 25 | GO:0008891: glycolate oxidase activity | 8.60E-04 |
| 26 | GO:0001053: plastid sigma factor activity | 8.60E-04 |
| 27 | GO:0080032: methyl jasmonate esterase activity | 8.60E-04 |
| 28 | GO:0016987: sigma factor activity | 8.60E-04 |
| 29 | GO:0009011: starch synthase activity | 8.60E-04 |
| 30 | GO:0008237: metallopeptidase activity | 1.22E-03 |
| 31 | GO:0016615: malate dehydrogenase activity | 1.33E-03 |
| 32 | GO:0008200: ion channel inhibitor activity | 1.33E-03 |
| 33 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.33E-03 |
| 34 | GO:0080030: methyl indole-3-acetate esterase activity | 1.33E-03 |
| 35 | GO:0000293: ferric-chelate reductase activity | 1.33E-03 |
| 36 | GO:0030060: L-malate dehydrogenase activity | 1.59E-03 |
| 37 | GO:0005261: cation channel activity | 1.59E-03 |
| 38 | GO:0015103: inorganic anion transmembrane transporter activity | 1.87E-03 |
| 39 | GO:0004222: metalloendopeptidase activity | 1.94E-03 |
| 40 | GO:0047617: acyl-CoA hydrolase activity | 3.12E-03 |
| 41 | GO:0015174: basic amino acid transmembrane transporter activity | 3.12E-03 |
| 42 | GO:0015020: glucuronosyltransferase activity | 3.46E-03 |
| 43 | GO:0008081: phosphoric diester hydrolase activity | 4.57E-03 |
| 44 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.57E-03 |
| 45 | GO:0031072: heat shock protein binding | 4.57E-03 |
| 46 | GO:0022857: transmembrane transporter activity | 5.14E-03 |
| 47 | GO:0031409: pigment binding | 5.79E-03 |
| 48 | GO:0043130: ubiquitin binding | 6.22E-03 |
| 49 | GO:0005216: ion channel activity | 6.66E-03 |
| 50 | GO:0004176: ATP-dependent peptidase activity | 7.11E-03 |
| 51 | GO:0003824: catalytic activity | 7.54E-03 |
| 52 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 7.57E-03 |
| 53 | GO:0008514: organic anion transmembrane transporter activity | 8.53E-03 |
| 54 | GO:0016887: ATPase activity | 8.96E-03 |
| 55 | GO:0047134: protein-disulfide reductase activity | 9.02E-03 |
| 56 | GO:0046873: metal ion transmembrane transporter activity | 1.00E-02 |
| 57 | GO:0008080: N-acetyltransferase activity | 1.00E-02 |
| 58 | GO:0050662: coenzyme binding | 1.06E-02 |
| 59 | GO:0004791: thioredoxin-disulfide reductase activity | 1.06E-02 |
| 60 | GO:0010181: FMN binding | 1.06E-02 |
| 61 | GO:0019901: protein kinase binding | 1.11E-02 |
| 62 | GO:0048038: quinone binding | 1.16E-02 |
| 63 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.28E-02 |
| 64 | GO:0016168: chlorophyll binding | 1.57E-02 |
| 65 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.96E-02 |
| 66 | GO:0003993: acid phosphatase activity | 2.23E-02 |
| 67 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.30E-02 |
| 68 | GO:0042393: histone binding | 2.37E-02 |
| 69 | GO:0004364: glutathione transferase activity | 2.51E-02 |
| 70 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.20E-02 |
| 71 | GO:0003777: microtubule motor activity | 3.44E-02 |
| 72 | GO:0015171: amino acid transmembrane transporter activity | 3.44E-02 |
| 73 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 3.85E-02 |
| 74 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 3.85E-02 |
| 75 | GO:0051082: unfolded protein binding | 4.11E-02 |
| 76 | GO:0015035: protein disulfide oxidoreductase activity | 4.19E-02 |
| 77 | GO:0016758: transferase activity, transferring hexosyl groups | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.22E-11 |
| 3 | GO:0009941: chloroplast envelope | 5.03E-05 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.11E-04 |
| 5 | GO:0009782: photosystem I antenna complex | 1.18E-04 |
| 6 | GO:0080085: signal recognition particle, chloroplast targeting | 2.73E-04 |
| 7 | GO:0033281: TAT protein transport complex | 4.52E-04 |
| 8 | GO:0030658: transport vesicle membrane | 6.47E-04 |
| 9 | GO:0009526: plastid envelope | 8.60E-04 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.46E-03 |
| 11 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 2.46E-03 |
| 12 | GO:0005720: nuclear heterochromatin | 2.78E-03 |
| 13 | GO:0042644: chloroplast nucleoid | 2.78E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.78E-03 |
| 15 | GO:0031969: chloroplast membrane | 3.14E-03 |
| 16 | GO:0032040: small-subunit processome | 4.19E-03 |
| 17 | GO:0030076: light-harvesting complex | 5.37E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 5.46E-03 |
| 19 | GO:0005623: cell | 7.01E-03 |
| 20 | GO:0005871: kinesin complex | 9.02E-03 |
| 21 | GO:0009504: cell plate | 1.11E-02 |
| 22 | GO:0016021: integral component of membrane | 1.20E-02 |
| 23 | GO:0005694: chromosome | 1.22E-02 |
| 24 | GO:0009534: chloroplast thylakoid | 1.35E-02 |
| 25 | GO:0009570: chloroplast stroma | 1.47E-02 |
| 26 | GO:0019005: SCF ubiquitin ligase complex | 1.82E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 1.82E-02 |
| 28 | GO:0005819: spindle | 2.30E-02 |
| 29 | GO:0031977: thylakoid lumen | 2.44E-02 |
| 30 | GO:0005773: vacuole | 2.83E-02 |
| 31 | GO:0000139: Golgi membrane | 3.78E-02 |
| 32 | GO:0012505: endomembrane system | 4.02E-02 |
| 33 | GO:0010287: plastoglobule | 4.64E-02 |
| 34 | GO:0016020: membrane | 4.90E-02 |
| 35 | GO:0009524: phragmoplast | 5.00E-02 |