GO Enrichment Analysis of Co-expressed Genes with
AT4G09650
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
2 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
5 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 0.00E+00 |
6 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
7 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
8 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
10 | GO:0008298: intracellular mRNA localization | 0.00E+00 |
11 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
12 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
13 | GO:0015979: photosynthesis | 1.61E-06 |
14 | GO:1901259: chloroplast rRNA processing | 2.10E-06 |
15 | GO:0032544: plastid translation | 7.49E-06 |
16 | GO:0009765: photosynthesis, light harvesting | 4.39E-05 |
17 | GO:0010207: photosystem II assembly | 4.53E-05 |
18 | GO:0015995: chlorophyll biosynthetic process | 4.94E-05 |
19 | GO:0034337: RNA folding | 2.53E-04 |
20 | GO:0000476: maturation of 4.5S rRNA | 2.53E-04 |
21 | GO:0000967: rRNA 5'-end processing | 2.53E-04 |
22 | GO:0015671: oxygen transport | 2.53E-04 |
23 | GO:0042371: vitamin K biosynthetic process | 2.53E-04 |
24 | GO:0043686: co-translational protein modification | 2.53E-04 |
25 | GO:0009657: plastid organization | 2.90E-04 |
26 | GO:0051262: protein tetramerization | 5.59E-04 |
27 | GO:0034470: ncRNA processing | 5.59E-04 |
28 | GO:0010541: acropetal auxin transport | 5.59E-04 |
29 | GO:0018026: peptidyl-lysine monomethylation | 5.59E-04 |
30 | GO:1904143: positive regulation of carotenoid biosynthetic process | 5.59E-04 |
31 | GO:0009773: photosynthetic electron transport in photosystem I | 5.62E-04 |
32 | GO:0019684: photosynthesis, light reaction | 5.62E-04 |
33 | GO:0018298: protein-chromophore linkage | 6.42E-04 |
34 | GO:0009767: photosynthetic electron transport chain | 7.28E-04 |
35 | GO:0005977: glycogen metabolic process | 9.07E-04 |
36 | GO:0048281: inflorescence morphogenesis | 9.07E-04 |
37 | GO:0006954: inflammatory response | 9.07E-04 |
38 | GO:0010160: formation of animal organ boundary | 9.07E-04 |
39 | GO:0090391: granum assembly | 9.07E-04 |
40 | GO:0015940: pantothenate biosynthetic process | 9.07E-04 |
41 | GO:0010114: response to red light | 1.18E-03 |
42 | GO:0006418: tRNA aminoacylation for protein translation | 1.23E-03 |
43 | GO:0007017: microtubule-based process | 1.23E-03 |
44 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.29E-03 |
45 | GO:0071484: cellular response to light intensity | 1.29E-03 |
46 | GO:0009152: purine ribonucleotide biosynthetic process | 1.29E-03 |
47 | GO:0046653: tetrahydrofolate metabolic process | 1.29E-03 |
48 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 1.29E-03 |
49 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.29E-03 |
50 | GO:0010148: transpiration | 1.29E-03 |
51 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.29E-03 |
52 | GO:0015976: carbon utilization | 1.73E-03 |
53 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.73E-03 |
54 | GO:2000122: negative regulation of stomatal complex development | 1.73E-03 |
55 | GO:0006546: glycine catabolic process | 1.73E-03 |
56 | GO:0010021: amylopectin biosynthetic process | 1.73E-03 |
57 | GO:0010037: response to carbon dioxide | 1.73E-03 |
58 | GO:0055114: oxidation-reduction process | 1.97E-03 |
59 | GO:0006810: transport | 2.14E-03 |
60 | GO:0006465: signal peptide processing | 2.21E-03 |
61 | GO:0009958: positive gravitropism | 2.21E-03 |
62 | GO:0032543: mitochondrial translation | 2.21E-03 |
63 | GO:0006564: L-serine biosynthetic process | 2.21E-03 |
64 | GO:0031365: N-terminal protein amino acid modification | 2.21E-03 |
65 | GO:0042549: photosystem II stabilization | 2.72E-03 |
66 | GO:0060918: auxin transport | 2.72E-03 |
67 | GO:0010190: cytochrome b6f complex assembly | 2.72E-03 |
68 | GO:0000741: karyogamy | 2.72E-03 |
69 | GO:0050665: hydrogen peroxide biosynthetic process | 2.72E-03 |
70 | GO:0032502: developmental process | 2.90E-03 |
71 | GO:0009955: adaxial/abaxial pattern specification | 3.27E-03 |
72 | GO:0048280: vesicle fusion with Golgi apparatus | 3.27E-03 |
73 | GO:0009854: oxidative photosynthetic carbon pathway | 3.27E-03 |
74 | GO:0010019: chloroplast-nucleus signaling pathway | 3.27E-03 |
75 | GO:0070370: cellular heat acclimation | 3.86E-03 |
76 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.86E-03 |
77 | GO:0009645: response to low light intensity stimulus | 3.86E-03 |
78 | GO:0010103: stomatal complex morphogenesis | 3.86E-03 |
79 | GO:0007155: cell adhesion | 4.48E-03 |
80 | GO:0010078: maintenance of root meristem identity | 4.48E-03 |
81 | GO:0055085: transmembrane transport | 4.66E-03 |
82 | GO:0043562: cellular response to nitrogen levels | 5.13E-03 |
83 | GO:0017004: cytochrome complex assembly | 5.13E-03 |
84 | GO:0001558: regulation of cell growth | 5.13E-03 |
85 | GO:0010204: defense response signaling pathway, resistance gene-independent | 5.13E-03 |
86 | GO:0010218: response to far red light | 5.63E-03 |
87 | GO:0019432: triglyceride biosynthetic process | 5.81E-03 |
88 | GO:0010206: photosystem II repair | 5.81E-03 |
89 | GO:0046916: cellular transition metal ion homeostasis | 5.81E-03 |
90 | GO:0048527: lateral root development | 5.91E-03 |
91 | GO:0009637: response to blue light | 6.48E-03 |
92 | GO:0009853: photorespiration | 6.48E-03 |
93 | GO:0005975: carbohydrate metabolic process | 7.18E-03 |
94 | GO:0045036: protein targeting to chloroplast | 7.26E-03 |
95 | GO:0006949: syncytium formation | 7.26E-03 |
96 | GO:0006896: Golgi to vacuole transport | 7.26E-03 |
97 | GO:0009684: indoleacetic acid biosynthetic process | 8.04E-03 |
98 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.04E-03 |
99 | GO:0043085: positive regulation of catalytic activity | 8.04E-03 |
100 | GO:0006415: translational termination | 8.04E-03 |
101 | GO:0008361: regulation of cell size | 8.83E-03 |
102 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.83E-03 |
103 | GO:0010588: cotyledon vascular tissue pattern formation | 9.66E-03 |
104 | GO:0009735: response to cytokinin | 1.01E-02 |
105 | GO:0009664: plant-type cell wall organization | 1.05E-02 |
106 | GO:0010540: basipetal auxin transport | 1.05E-02 |
107 | GO:0048467: gynoecium development | 1.05E-02 |
108 | GO:0010143: cutin biosynthetic process | 1.05E-02 |
109 | GO:0009416: response to light stimulus | 1.16E-02 |
110 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.17E-02 |
111 | GO:0080167: response to karrikin | 1.24E-02 |
112 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.32E-02 |
113 | GO:0048367: shoot system development | 1.38E-02 |
114 | GO:0051302: regulation of cell division | 1.42E-02 |
115 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.42E-02 |
116 | GO:0019915: lipid storage | 1.52E-02 |
117 | GO:0061077: chaperone-mediated protein folding | 1.52E-02 |
118 | GO:0009269: response to desiccation | 1.52E-02 |
119 | GO:0019748: secondary metabolic process | 1.62E-02 |
120 | GO:0030245: cellulose catabolic process | 1.62E-02 |
121 | GO:0016226: iron-sulfur cluster assembly | 1.62E-02 |
122 | GO:0009742: brassinosteroid mediated signaling pathway | 1.71E-02 |
123 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.72E-02 |
124 | GO:0009686: gibberellin biosynthetic process | 1.72E-02 |
125 | GO:0001944: vasculature development | 1.72E-02 |
126 | GO:0048443: stamen development | 1.83E-02 |
127 | GO:0009306: protein secretion | 1.83E-02 |
128 | GO:0032259: methylation | 1.92E-02 |
129 | GO:0016117: carotenoid biosynthetic process | 1.94E-02 |
130 | GO:0042147: retrograde transport, endosome to Golgi | 1.94E-02 |
131 | GO:0010118: stomatal movement | 2.05E-02 |
132 | GO:0080022: primary root development | 2.05E-02 |
133 | GO:0010087: phloem or xylem histogenesis | 2.05E-02 |
134 | GO:0009741: response to brassinosteroid | 2.16E-02 |
135 | GO:0010268: brassinosteroid homeostasis | 2.16E-02 |
136 | GO:0006520: cellular amino acid metabolic process | 2.16E-02 |
137 | GO:0006662: glycerol ether metabolic process | 2.16E-02 |
138 | GO:0010197: polar nucleus fusion | 2.16E-02 |
139 | GO:0009646: response to absence of light | 2.27E-02 |
140 | GO:0009851: auxin biosynthetic process | 2.39E-02 |
141 | GO:0006623: protein targeting to vacuole | 2.39E-02 |
142 | GO:0048825: cotyledon development | 2.39E-02 |
143 | GO:0019252: starch biosynthetic process | 2.39E-02 |
144 | GO:0016132: brassinosteroid biosynthetic process | 2.51E-02 |
145 | GO:0071554: cell wall organization or biogenesis | 2.51E-02 |
146 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.51E-02 |
147 | GO:0006413: translational initiation | 2.60E-02 |
148 | GO:1901657: glycosyl compound metabolic process | 2.75E-02 |
149 | GO:0016125: sterol metabolic process | 2.87E-02 |
150 | GO:0009639: response to red or far red light | 2.87E-02 |
151 | GO:0009828: plant-type cell wall loosening | 2.87E-02 |
152 | GO:0009739: response to gibberellin | 3.12E-02 |
153 | GO:0006412: translation | 3.16E-02 |
154 | GO:0010027: thylakoid membrane organization | 3.26E-02 |
155 | GO:0042128: nitrate assimilation | 3.52E-02 |
156 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.66E-02 |
157 | GO:0016311: dephosphorylation | 3.80E-02 |
158 | GO:0009817: defense response to fungus, incompatible interaction | 3.93E-02 |
159 | GO:0048481: plant ovule development | 3.93E-02 |
160 | GO:0009813: flavonoid biosynthetic process | 4.08E-02 |
161 | GO:0009658: chloroplast organization | 4.30E-02 |
162 | GO:0010119: regulation of stomatal movement | 4.36E-02 |
163 | GO:0042254: ribosome biogenesis | 4.38E-02 |
164 | GO:0034599: cellular response to oxidative stress | 4.80E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
4 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
5 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
6 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
7 | GO:0019899: enzyme binding | 3.39E-06 |
8 | GO:0019843: rRNA binding | 7.21E-06 |
9 | GO:0002161: aminoacyl-tRNA editing activity | 1.07E-05 |
10 | GO:0016851: magnesium chelatase activity | 2.42E-05 |
11 | GO:0043495: protein anchor | 4.39E-05 |
12 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.41E-04 |
13 | GO:0005344: oxygen transporter activity | 2.53E-04 |
14 | GO:0046906: tetrapyrrole binding | 2.53E-04 |
15 | GO:0005227: calcium activated cation channel activity | 2.53E-04 |
16 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 2.53E-04 |
17 | GO:0051777: ent-kaurenoate oxidase activity | 2.53E-04 |
18 | GO:0004856: xylulokinase activity | 2.53E-04 |
19 | GO:0042586: peptide deformylase activity | 2.53E-04 |
20 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.53E-04 |
21 | GO:0016168: chlorophyll binding | 4.92E-04 |
22 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.59E-04 |
23 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.59E-04 |
24 | GO:0004047: aminomethyltransferase activity | 5.59E-04 |
25 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 5.59E-04 |
26 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.59E-04 |
27 | GO:0016630: protochlorophyllide reductase activity | 5.59E-04 |
28 | GO:0019156: isoamylase activity | 5.59E-04 |
29 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.59E-04 |
30 | GO:0008864: formyltetrahydrofolate deformylase activity | 9.07E-04 |
31 | GO:0004751: ribose-5-phosphate isomerase activity | 9.07E-04 |
32 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 9.07E-04 |
33 | GO:0005528: FK506 binding | 1.12E-03 |
34 | GO:0004185: serine-type carboxypeptidase activity | 1.18E-03 |
35 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 1.29E-03 |
36 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 1.29E-03 |
37 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.29E-03 |
38 | GO:0016149: translation release factor activity, codon specific | 1.29E-03 |
39 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 1.29E-03 |
40 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.43E-03 |
41 | GO:0022891: substrate-specific transmembrane transporter activity | 1.61E-03 |
42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.73E-03 |
43 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.73E-03 |
44 | GO:0045430: chalcone isomerase activity | 1.73E-03 |
45 | GO:0019199: transmembrane receptor protein kinase activity | 1.73E-03 |
46 | GO:0042277: peptide binding | 1.73E-03 |
47 | GO:0008891: glycolate oxidase activity | 1.73E-03 |
48 | GO:0016279: protein-lysine N-methyltransferase activity | 1.73E-03 |
49 | GO:0004812: aminoacyl-tRNA ligase activity | 1.90E-03 |
50 | GO:0016846: carbon-sulfur lyase activity | 2.21E-03 |
51 | GO:0003959: NADPH dehydrogenase activity | 2.21E-03 |
52 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.21E-03 |
53 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.72E-03 |
54 | GO:0004556: alpha-amylase activity | 2.72E-03 |
55 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.72E-03 |
56 | GO:0005261: cation channel activity | 3.27E-03 |
57 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.27E-03 |
58 | GO:0005200: structural constituent of cytoskeleton | 3.49E-03 |
59 | GO:0046914: transition metal ion binding | 5.13E-03 |
60 | GO:0009055: electron carrier activity | 5.41E-03 |
61 | GO:0016491: oxidoreductase activity | 5.44E-03 |
62 | GO:0003747: translation release factor activity | 5.81E-03 |
63 | GO:0042802: identical protein binding | 7.32E-03 |
64 | GO:0008559: xenobiotic-transporting ATPase activity | 8.04E-03 |
65 | GO:0008378: galactosyltransferase activity | 8.83E-03 |
66 | GO:0000049: tRNA binding | 8.83E-03 |
67 | GO:0008168: methyltransferase activity | 8.97E-03 |
68 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.04E-03 |
69 | GO:0004089: carbonate dehydratase activity | 9.66E-03 |
70 | GO:0003725: double-stranded RNA binding | 9.66E-03 |
71 | GO:0004565: beta-galactosidase activity | 9.66E-03 |
72 | GO:0010329: auxin efflux transmembrane transporter activity | 9.66E-03 |
73 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.66E-03 |
74 | GO:0008266: poly(U) RNA binding | 1.05E-02 |
75 | GO:0031409: pigment binding | 1.23E-02 |
76 | GO:0051536: iron-sulfur cluster binding | 1.32E-02 |
77 | GO:0008810: cellulase activity | 1.72E-02 |
78 | GO:0003727: single-stranded RNA binding | 1.83E-02 |
79 | GO:0047134: protein-disulfide reductase activity | 1.94E-02 |
80 | GO:0003924: GTPase activity | 2.03E-02 |
81 | GO:0004791: thioredoxin-disulfide reductase activity | 2.27E-02 |
82 | GO:0010181: FMN binding | 2.27E-02 |
83 | GO:0020037: heme binding | 2.30E-02 |
84 | GO:0008565: protein transporter activity | 2.42E-02 |
85 | GO:0005525: GTP binding | 2.45E-02 |
86 | GO:0048038: quinone binding | 2.51E-02 |
87 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.75E-02 |
88 | GO:0016791: phosphatase activity | 2.87E-02 |
89 | GO:0008483: transaminase activity | 3.00E-02 |
90 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.00E-02 |
91 | GO:0016413: O-acetyltransferase activity | 3.13E-02 |
92 | GO:0016597: amino acid binding | 3.13E-02 |
93 | GO:0003743: translation initiation factor activity | 3.26E-02 |
94 | GO:0003735: structural constituent of ribosome | 3.38E-02 |
95 | GO:0016887: ATPase activity | 3.50E-02 |
96 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.54E-02 |
97 | GO:0102483: scopolin beta-glucosidase activity | 3.66E-02 |
98 | GO:0003824: catalytic activity | 3.80E-02 |
99 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.93E-02 |
100 | GO:0004601: peroxidase activity | 4.30E-02 |
101 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.36E-02 |
102 | GO:0003993: acid phosphatase activity | 4.80E-02 |
103 | GO:0008422: beta-glucosidase activity | 4.95E-02 |
104 | GO:0000149: SNARE binding | 4.95E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009571: proplastid stroma | 0.00E+00 |
2 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
3 | GO:0009507: chloroplast | 1.82E-30 |
4 | GO:0009535: chloroplast thylakoid membrane | 4.39E-21 |
5 | GO:0009570: chloroplast stroma | 1.96E-17 |
6 | GO:0009579: thylakoid | 6.04E-10 |
7 | GO:0009534: chloroplast thylakoid | 6.42E-10 |
8 | GO:0009543: chloroplast thylakoid lumen | 8.39E-10 |
9 | GO:0009941: chloroplast envelope | 1.14E-08 |
10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.04E-05 |
11 | GO:0010007: magnesium chelatase complex | 1.07E-05 |
12 | GO:0009523: photosystem II | 1.46E-05 |
13 | GO:0030095: chloroplast photosystem II | 4.53E-05 |
14 | GO:0009654: photosystem II oxygen evolving complex | 8.85E-05 |
15 | GO:0031977: thylakoid lumen | 1.28E-04 |
16 | GO:0009547: plastid ribosome | 2.53E-04 |
17 | GO:0005787: signal peptidase complex | 2.53E-04 |
18 | GO:0005840: ribosome | 2.84E-04 |
19 | GO:0031969: chloroplast membrane | 5.67E-04 |
20 | GO:0033281: TAT protein transport complex | 9.07E-04 |
21 | GO:0042651: thylakoid membrane | 1.23E-03 |
22 | GO:0015630: microtubule cytoskeleton | 1.29E-03 |
23 | GO:0005960: glycine cleavage complex | 1.29E-03 |
24 | GO:0009517: PSII associated light-harvesting complex II | 1.73E-03 |
25 | GO:0009522: photosystem I | 2.37E-03 |
26 | GO:0019898: extrinsic component of membrane | 2.54E-03 |
27 | GO:0012507: ER to Golgi transport vesicle membrane | 4.48E-03 |
28 | GO:0009539: photosystem II reaction center | 5.13E-03 |
29 | GO:0005763: mitochondrial small ribosomal subunit | 5.81E-03 |
30 | GO:0045298: tubulin complex | 5.81E-03 |
31 | GO:0000311: plastid large ribosomal subunit | 8.83E-03 |
32 | GO:0032040: small-subunit processome | 8.83E-03 |
33 | GO:0009508: plastid chromosome | 9.66E-03 |
34 | GO:0030076: light-harvesting complex | 1.14E-02 |
35 | GO:0005618: cell wall | 1.80E-02 |
36 | GO:0009295: nucleoid | 3.00E-02 |
37 | GO:0030529: intracellular ribonucleoprotein complex | 3.26E-02 |
38 | GO:0046658: anchored component of plasma membrane | 3.69E-02 |
39 | GO:0048046: apoplast | 3.77E-02 |
40 | GO:0009707: chloroplast outer membrane | 3.93E-02 |
41 | GO:0000325: plant-type vacuole | 4.36E-02 |