Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G05390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010324: membrane invagination0.00E+00
2GO:0010055: atrichoblast differentiation0.00E+00
3GO:1902001: fatty acid transmembrane transport0.00E+00
4GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
5GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
6GO:0015690: aluminum cation transport0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
9GO:0009312: oligosaccharide biosynthetic process0.00E+00
10GO:0046865: terpenoid transport0.00E+00
11GO:0071456: cellular response to hypoxia2.60E-07
12GO:0010112: regulation of systemic acquired resistance3.01E-07
13GO:0010200: response to chitin3.98E-05
14GO:0045227: capsule polysaccharide biosynthetic process6.79E-05
15GO:0033358: UDP-L-arabinose biosynthetic process6.79E-05
16GO:0009751: response to salicylic acid1.04E-04
17GO:0009643: photosynthetic acclimation1.54E-04
18GO:0006012: galactose metabolic process2.25E-04
19GO:1900057: positive regulation of leaf senescence2.73E-04
20GO:0051707: response to other organism2.78E-04
21GO:0009968: negative regulation of signal transduction3.27E-04
22GO:1990542: mitochondrial transmembrane transport3.27E-04
23GO:0032107: regulation of response to nutrient levels3.27E-04
24GO:1902600: hydrogen ion transmembrane transport3.27E-04
25GO:0048508: embryonic meristem development3.27E-04
26GO:0015760: glucose-6-phosphate transport3.27E-04
27GO:0046256: 2,4,6-trinitrotoluene catabolic process3.27E-04
28GO:0043547: positive regulation of GTPase activity3.27E-04
29GO:0019567: arabinose biosynthetic process3.27E-04
30GO:0080173: male-female gamete recognition during double fertilization3.27E-04
31GO:0033306: phytol metabolic process3.27E-04
32GO:0009700: indole phytoalexin biosynthetic process3.27E-04
33GO:0050691: regulation of defense response to virus by host3.27E-04
34GO:0009636: response to toxic substance3.36E-04
35GO:0010150: leaf senescence3.42E-04
36GO:0010120: camalexin biosynthetic process4.21E-04
37GO:0009737: response to abscisic acid4.90E-04
38GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.99E-04
39GO:0009753: response to jasmonic acid6.11E-04
40GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.13E-04
41GO:0009838: abscission7.13E-04
42GO:0080181: lateral root branching7.13E-04
43GO:0006024: glycosaminoglycan biosynthetic process7.13E-04
44GO:0055088: lipid homeostasis7.13E-04
45GO:0019521: D-gluconate metabolic process7.13E-04
46GO:0015908: fatty acid transport7.13E-04
47GO:0044419: interspecies interaction between organisms7.13E-04
48GO:0009945: radial axis specification7.13E-04
49GO:0015712: hexose phosphate transport7.13E-04
50GO:0010115: regulation of abscisic acid biosynthetic process7.13E-04
51GO:0000719: photoreactive repair7.13E-04
52GO:0051258: protein polymerization7.13E-04
53GO:0010271: regulation of chlorophyll catabolic process7.13E-04
54GO:0015012: heparan sulfate proteoglycan biosynthetic process7.13E-04
55GO:0071668: plant-type cell wall assembly7.13E-04
56GO:0009407: toxin catabolic process1.15E-03
57GO:0015692: lead ion transport1.16E-03
58GO:0015695: organic cation transport1.16E-03
59GO:0015714: phosphoenolpyruvate transport1.16E-03
60GO:0080168: abscisic acid transport1.16E-03
61GO:1900055: regulation of leaf senescence1.16E-03
62GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.16E-03
63GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.16E-03
64GO:0080163: regulation of protein serine/threonine phosphatase activity1.16E-03
65GO:0006954: inflammatory response1.16E-03
66GO:0035436: triose phosphate transmembrane transport1.16E-03
67GO:0009225: nucleotide-sugar metabolic process1.31E-03
68GO:2000377: regulation of reactive oxygen species metabolic process1.61E-03
69GO:0080147: root hair cell development1.61E-03
70GO:0010116: positive regulation of abscisic acid biosynthetic process1.66E-03
71GO:0010731: protein glutathionylation1.66E-03
72GO:0015696: ammonium transport1.66E-03
73GO:0051289: protein homotetramerization1.66E-03
74GO:0006979: response to oxidative stress2.15E-03
75GO:1901141: regulation of lignin biosynthetic process2.23E-03
76GO:0010109: regulation of photosynthesis2.23E-03
77GO:0072488: ammonium transmembrane transport2.23E-03
78GO:0015713: phosphoglycerate transport2.23E-03
79GO:0009625: response to insect2.33E-03
80GO:0031347: regulation of defense response2.41E-03
81GO:0006486: protein glycosylation2.77E-03
82GO:0016094: polyprenol biosynthetic process2.84E-03
83GO:0034052: positive regulation of plant-type hypersensitive response2.84E-03
84GO:0050832: defense response to fungus3.33E-03
85GO:0009759: indole glucosinolate biosynthetic process3.51E-03
86GO:0009749: response to glucose3.68E-03
87GO:0010193: response to ozone3.94E-03
88GO:0071470: cellular response to osmotic stress4.23E-03
89GO:0042372: phylloquinone biosynthetic process4.23E-03
90GO:0045926: negative regulation of growth4.23E-03
91GO:0009942: longitudinal axis specification4.23E-03
92GO:1902074: response to salt4.99E-03
93GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway4.99E-03
94GO:0071446: cellular response to salicylic acid stimulus4.99E-03
95GO:1900056: negative regulation of leaf senescence4.99E-03
96GO:0000122: negative regulation of transcription from RNA polymerase II promoter4.99E-03
97GO:0031540: regulation of anthocyanin biosynthetic process5.80E-03
98GO:0010928: regulation of auxin mediated signaling pathway5.80E-03
99GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.80E-03
100GO:0009819: drought recovery5.80E-03
101GO:0009850: auxin metabolic process5.80E-03
102GO:0043068: positive regulation of programmed cell death5.80E-03
103GO:2000031: regulation of salicylic acid mediated signaling pathway6.65E-03
104GO:0010208: pollen wall assembly6.65E-03
105GO:0006997: nucleus organization6.65E-03
106GO:0010204: defense response signaling pathway, resistance gene-independent6.65E-03
107GO:0042742: defense response to bacterium6.66E-03
108GO:0007338: single fertilization7.54E-03
109GO:0006098: pentose-phosphate shunt7.54E-03
110GO:0019432: triglyceride biosynthetic process7.54E-03
111GO:0010380: regulation of chlorophyll biosynthetic process8.48E-03
112GO:0008202: steroid metabolic process8.48E-03
113GO:0051555: flavonol biosynthetic process9.45E-03
114GO:0009870: defense response signaling pathway, resistance gene-dependent9.45E-03
115GO:0006032: chitin catabolic process9.45E-03
116GO:0007166: cell surface receptor signaling pathway1.03E-02
117GO:0009684: indoleacetic acid biosynthetic process1.05E-02
118GO:0019684: photosynthesis, light reaction1.05E-02
119GO:0009089: lysine biosynthetic process via diaminopimelate1.05E-02
120GO:0072593: reactive oxygen species metabolic process1.05E-02
121GO:0006887: exocytosis1.12E-02
122GO:2000028: regulation of photoperiodism, flowering1.26E-02
123GO:0018107: peptidyl-threonine phosphorylation1.26E-02
124GO:0006829: zinc II ion transport1.26E-02
125GO:0002237: response to molecule of bacterial origin1.37E-02
126GO:0006855: drug transmembrane transport1.43E-02
127GO:0046688: response to copper ion1.49E-02
128GO:0006812: cation transport1.54E-02
129GO:0000162: tryptophan biosynthetic process1.61E-02
130GO:0006813: potassium ion transport1.65E-02
131GO:0009723: response to ethylene1.83E-02
132GO:0006825: copper ion transport1.86E-02
133GO:0009414: response to water deprivation1.93E-02
134GO:0016998: cell wall macromolecule catabolic process1.99E-02
135GO:0009269: response to desiccation1.99E-02
136GO:0080167: response to karrikin2.00E-02
137GO:0009626: plant-type hypersensitive response2.08E-02
138GO:0009611: response to wounding2.12E-02
139GO:0009411: response to UV2.25E-02
140GO:0009624: response to nematode2.35E-02
141GO:0042127: regulation of cell proliferation2.39E-02
142GO:0070417: cellular response to cold2.53E-02
143GO:0042391: regulation of membrane potential2.68E-02
144GO:0000271: polysaccharide biosynthetic process2.68E-02
145GO:0009651: response to salt stress2.80E-02
146GO:0010182: sugar mediated signaling pathway2.82E-02
147GO:0045489: pectin biosynthetic process2.82E-02
148GO:0006885: regulation of pH2.82E-02
149GO:0006520: cellular amino acid metabolic process2.82E-02
150GO:0009646: response to absence of light2.97E-02
151GO:0015031: protein transport3.02E-02
152GO:0071554: cell wall organization or biogenesis3.28E-02
153GO:0002229: defense response to oomycetes3.28E-02
154GO:0009790: embryo development3.43E-02
155GO:0007264: small GTPase mediated signal transduction3.44E-02
156GO:0019761: glucosinolate biosynthetic process3.44E-02
157GO:0048235: pollen sperm cell differentiation3.44E-02
158GO:0009567: double fertilization forming a zygote and endosperm3.76E-02
159GO:0071805: potassium ion transmembrane transport3.92E-02
160GO:0006904: vesicle docking involved in exocytosis3.92E-02
161GO:0010029: regulation of seed germination4.43E-02
162GO:0009739: response to gibberellin4.53E-02
163GO:0006357: regulation of transcription from RNA polymerase II promoter4.59E-02
164GO:0009627: systemic acquired resistance4.61E-02
165GO:0006906: vesicle fusion4.61E-02
166GO:0006950: response to stress4.78E-02
167GO:0008380: RNA splicing4.82E-02
168GO:0009617: response to bacterium4.82E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
3GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
6GO:0005212: structural constituent of eye lens0.00E+00
7GO:0003978: UDP-glucose 4-epimerase activity4.04E-06
8GO:0050373: UDP-arabinose 4-epimerase activity6.79E-05
9GO:0043295: glutathione binding2.73E-04
10GO:0015245: fatty acid transporter activity3.27E-04
11GO:0010285: L,L-diaminopimelate aminotransferase activity3.27E-04
12GO:2001227: quercitrin binding3.27E-04
13GO:0019707: protein-cysteine S-acyltransferase activity3.27E-04
14GO:2001147: camalexin binding3.27E-04
15GO:0047364: desulfoglucosinolate sulfotransferase activity7.13E-04
16GO:0015152: glucose-6-phosphate transmembrane transporter activity7.13E-04
17GO:0032934: sterol binding7.13E-04
18GO:0048531: beta-1,3-galactosyltransferase activity7.13E-04
19GO:0015036: disulfide oxidoreductase activity7.13E-04
20GO:0071917: triose-phosphate transmembrane transporter activity1.16E-03
21GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.16E-03
22GO:0016531: copper chaperone activity1.16E-03
23GO:0032403: protein complex binding1.16E-03
24GO:0001046: core promoter sequence-specific DNA binding1.61E-03
25GO:0017077: oxidative phosphorylation uncoupler activity1.66E-03
26GO:0035529: NADH pyrophosphatase activity1.66E-03
27GO:0022890: inorganic cation transmembrane transporter activity1.66E-03
28GO:0010178: IAA-amino acid conjugate hydrolase activity1.66E-03
29GO:0004364: glutathione transferase activity1.80E-03
30GO:0015120: phosphoglycerate transmembrane transporter activity2.23E-03
31GO:0004834: tryptophan synthase activity2.23E-03
32GO:0004737: pyruvate decarboxylase activity2.23E-03
33GO:0004930: G-protein coupled receptor activity2.23E-03
34GO:0043565: sequence-specific DNA binding2.25E-03
35GO:0004499: N,N-dimethylaniline monooxygenase activity2.53E-03
36GO:0070696: transmembrane receptor protein serine/threonine kinase binding2.84E-03
37GO:0002094: polyprenyltransferase activity2.84E-03
38GO:0005496: steroid binding2.84E-03
39GO:0047631: ADP-ribose diphosphatase activity2.84E-03
40GO:0015299: solute:proton antiporter activity3.43E-03
41GO:0008519: ammonium transmembrane transporter activity3.51E-03
42GO:0030976: thiamine pyrophosphate binding3.51E-03
43GO:0000210: NAD+ diphosphatase activity3.51E-03
44GO:0102391: decanoate--CoA ligase activity4.23E-03
45GO:0003950: NAD+ ADP-ribosyltransferase activity4.23E-03
46GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.23E-03
47GO:0004144: diacylglycerol O-acyltransferase activity4.23E-03
48GO:0004656: procollagen-proline 4-dioxygenase activity4.23E-03
49GO:0004467: long-chain fatty acid-CoA ligase activity4.99E-03
50GO:0016831: carboxy-lyase activity4.99E-03
51GO:0008483: transaminase activity5.07E-03
52GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity5.07E-03
53GO:0004714: transmembrane receptor protein tyrosine kinase activity5.80E-03
54GO:0047893: flavonol 3-O-glucosyltransferase activity5.80E-03
55GO:0004033: aldo-keto reductase (NADP) activity5.80E-03
56GO:0008375: acetylglucosaminyltransferase activity6.36E-03
57GO:0008142: oxysterol binding6.65E-03
58GO:0047617: acyl-CoA hydrolase activity8.48E-03
59GO:0004568: chitinase activity9.45E-03
60GO:0004864: protein phosphatase inhibitor activity9.45E-03
61GO:0008559: xenobiotic-transporting ATPase activity1.05E-02
62GO:0015386: potassium:proton antiporter activity1.05E-02
63GO:0050661: NADP binding1.08E-02
64GO:0005315: inorganic phosphate transmembrane transporter activity1.26E-02
65GO:0030552: cAMP binding1.49E-02
66GO:0030553: cGMP binding1.49E-02
67GO:0008146: sulfotransferase activity1.49E-02
68GO:0031418: L-ascorbic acid binding1.73E-02
69GO:0003954: NADH dehydrogenase activity1.73E-02
70GO:0005509: calcium ion binding1.76E-02
71GO:0005216: ion channel activity1.86E-02
72GO:0015079: potassium ion transmembrane transporter activity1.86E-02
73GO:0008324: cation transmembrane transporter activity1.86E-02
74GO:0019706: protein-cysteine S-palmitoyltransferase activity1.99E-02
75GO:0035251: UDP-glucosyltransferase activity1.99E-02
76GO:0004497: monooxygenase activity2.00E-02
77GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.12E-02
78GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.50E-02
79GO:0005451: monovalent cation:proton antiporter activity2.68E-02
80GO:0005249: voltage-gated potassium channel activity2.68E-02
81GO:0030551: cyclic nucleotide binding2.68E-02
82GO:0004674: protein serine/threonine kinase activity2.73E-02
83GO:0005199: structural constituent of cell wall2.82E-02
84GO:0046873: metal ion transmembrane transporter activity2.82E-02
85GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.86E-02
86GO:0016757: transferase activity, transferring glycosyl groups2.87E-02
87GO:0016758: transferase activity, transferring hexosyl groups2.87E-02
88GO:0030170: pyridoxal phosphate binding3.27E-02
89GO:0004197: cysteine-type endopeptidase activity3.44E-02
90GO:0015385: sodium:proton antiporter activity3.60E-02
91GO:0003700: transcription factor activity, sequence-specific DNA binding3.74E-02
92GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.78E-02
93GO:0015297: antiporter activity3.87E-02
94GO:0008237: metallopeptidase activity3.92E-02
95GO:0016413: O-acetyltransferase activity4.09E-02
96GO:0030247: polysaccharide binding4.78E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0016021: integral component of membrane2.21E-05
3GO:0005794: Golgi apparatus8.78E-05
4GO:0000813: ESCRT I complex1.07E-04
5GO:0000164: protein phosphatase type 1 complex1.07E-04
6GO:0000138: Golgi trans cisterna3.27E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane7.13E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane7.13E-04
9GO:0005901: caveola7.13E-04
10GO:0009530: primary cell wall1.16E-03
11GO:0070062: extracellular exosome1.66E-03
12GO:0005777: peroxisome2.18E-03
13GO:0016363: nuclear matrix4.23E-03
14GO:0032580: Golgi cisterna membrane4.77E-03
15GO:0005802: trans-Golgi network1.35E-02
16GO:0005795: Golgi stack1.49E-02
17GO:0005769: early endosome1.61E-02
18GO:0005758: mitochondrial intermembrane space1.73E-02
19GO:0005770: late endosome2.82E-02
20GO:0005743: mitochondrial inner membrane2.97E-02
21GO:0009504: cell plate3.12E-02
22GO:0031965: nuclear membrane3.12E-02
23GO:0000145: exocyst3.44E-02
24GO:0005789: endoplasmic reticulum membrane4.08E-02
25GO:0005768: endosome4.90E-02
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Gene type



Gene DE type