co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G04695

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
2	GO:0033198: response to ATP	0.00E+00
3	GO:0002764: immune response-regulating signaling pathway	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:0006468: protein phosphorylation	6.14E-06
6	GO:0006952: defense response	2.94E-05
7	GO:0034975: protein folding in endoplasmic reticulum	1.64E-04
8	GO:0048482: plant ovule morphogenesis	1.64E-04
9	GO:0010365: positive regulation of ethylene biosynthetic process	1.64E-04
10	GO:0019673: GDP-mannose metabolic process	1.64E-04
11	GO:0051180: vitamin transport	1.64E-04
12	GO:0030974: thiamine pyrophosphate transport	1.64E-04
13	GO:0032491: detection of molecule of fungal origin	1.64E-04
14	GO:0042742: defense response to bacterium	2.23E-04
15	GO:0009817: defense response to fungus, incompatible interaction	2.93E-04
16	GO:0046939: nucleotide phosphorylation	3.73E-04
17	GO:0080185: effector dependent induction by symbiont of host immune response	3.73E-04
18	GO:1902066: regulation of cell wall pectin metabolic process	3.73E-04
19	GO:0031349: positive regulation of defense response	3.73E-04
20	GO:0015893: drug transport	3.73E-04
21	GO:0045732: positive regulation of protein catabolic process	3.73E-04
22	GO:0043066: negative regulation of apoptotic process	3.73E-04
23	GO:0010541: acropetal auxin transport	3.73E-04
24	GO:0019725: cellular homeostasis	3.73E-04
25	GO:0002221: pattern recognition receptor signaling pathway	3.73E-04
26	GO:0007034: vacuolar transport	4.55E-04
27	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	6.11E-04
28	GO:1901672: positive regulation of systemic acquired resistance	6.11E-04
29	GO:0048586: regulation of long-day photoperiodism, flowering	6.11E-04
30	GO:0032922: circadian regulation of gene expression	6.11E-04
31	GO:0016045: detection of bacterium	6.11E-04
32	GO:0010359: regulation of anion channel activity	6.11E-04
33	GO:0061158: 3'-UTR-mediated mRNA destabilization	6.11E-04
34	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.11E-04
35	GO:0051176: positive regulation of sulfur metabolic process	6.11E-04
36	GO:0046621: negative regulation of organ growth	6.11E-04
37	GO:0009863: salicylic acid mediated signaling pathway	6.27E-04
38	GO:2000022: regulation of jasmonic acid mediated signaling pathway	8.26E-04
39	GO:0030100: regulation of endocytosis	8.73E-04
40	GO:0010104: regulation of ethylene-activated signaling pathway	8.73E-04
41	GO:0071323: cellular response to chitin	8.73E-04
42	GO:0043967: histone H4 acetylation	8.73E-04
43	GO:0000187: activation of MAPK activity	8.73E-04
44	GO:0009626: plant-type hypersensitive response	1.07E-03
45	GO:0071219: cellular response to molecule of bacterial origin	1.16E-03
46	GO:0080142: regulation of salicylic acid biosynthetic process	1.16E-03
47	GO:0046777: protein autophosphorylation	1.17E-03
48	GO:0048317: seed morphogenesis	1.80E-03
49	GO:0034314: Arp2/3 complex-mediated actin nucleation	1.80E-03
50	GO:2000037: regulation of stomatal complex patterning	2.17E-03
51	GO:0009423: chorismate biosynthetic process	2.17E-03
52	GO:0070370: cellular heat acclimation	2.55E-03
53	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.95E-03
54	GO:0030162: regulation of proteolysis	2.95E-03
55	GO:0006491: N-glycan processing	2.95E-03
56	GO:1900150: regulation of defense response to fungus	2.95E-03
57	GO:0032875: regulation of DNA endoreduplication	2.95E-03
58	GO:0045010: actin nucleation	2.95E-03
59	GO:0006865: amino acid transport	3.36E-03
60	GO:0009932: cell tip growth	3.37E-03
61	GO:0010204: defense response signaling pathway, resistance gene-independent	3.37E-03
62	GO:0010112: regulation of systemic acquired resistance	3.81E-03
63	GO:0009060: aerobic respiration	3.81E-03
64	GO:0000902: cell morphogenesis	3.81E-03
65	GO:0007165: signal transduction	3.96E-03
66	GO:0006897: endocytosis	4.18E-03
67	GO:0048268: clathrin coat assembly	4.27E-03
68	GO:0051707: response to other organism	4.53E-03
69	GO:0009073: aromatic amino acid family biosynthetic process	5.25E-03
70	GO:0015031: protein transport	5.45E-03
71	GO:0015706: nitrate transport	5.77E-03
72	GO:0016925: protein sumoylation	5.77E-03
73	GO:0010200: response to chitin	5.91E-03
74	GO:0006486: protein glycosylation	6.10E-03
75	GO:0009785: blue light signaling pathway	6.30E-03
76	GO:0010229: inflorescence development	6.30E-03
77	GO:0009266: response to temperature stimulus	6.85E-03
78	GO:0034605: cellular response to heat	6.85E-03
79	GO:0002237: response to molecule of bacterial origin	6.85E-03
80	GO:0007015: actin filament organization	6.85E-03
81	GO:0010053: root epidermal cell differentiation	7.41E-03
82	GO:0009825: multidimensional cell growth	7.41E-03
83	GO:0010167: response to nitrate	7.41E-03
84	GO:0046854: phosphatidylinositol phosphorylation	7.41E-03
85	GO:0006487: protein N-linked glycosylation	8.59E-03
86	GO:0006338: chromatin remodeling	8.59E-03
87	GO:0009408: response to heat	9.29E-03
88	GO:0003333: amino acid transmembrane transport	9.84E-03
89	GO:0010017: red or far-red light signaling pathway	1.05E-02
90	GO:0009814: defense response, incompatible interaction	1.05E-02
91	GO:0016226: iron-sulfur cluster assembly	1.05E-02
92	GO:0031348: negative regulation of defense response	1.05E-02
93	GO:0010227: floral organ abscission	1.11E-02
94	GO:0006284: base-excision repair	1.18E-02
95	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.25E-02
96	GO:0048544: recognition of pollen	1.47E-02
97	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.62E-02
98	GO:0006891: intra-Golgi vesicle-mediated transport	1.62E-02
99	GO:0006470: protein dephosphorylation	1.72E-02
100	GO:0010090: trichome morphogenesis	1.77E-02
101	GO:0009617: response to bacterium	1.80E-02
102	GO:0019760: glucosinolate metabolic process	1.86E-02
103	GO:0006464: cellular protein modification process	1.86E-02
104	GO:0006904: vesicle docking involved in exocytosis	1.94E-02
105	GO:0051607: defense response to virus	2.02E-02
106	GO:0000910: cytokinesis	2.02E-02
107	GO:0001666: response to hypoxia	2.10E-02
108	GO:0009615: response to virus	2.10E-02
109	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.19E-02
110	GO:0009816: defense response to bacterium, incompatible interaction	2.19E-02
111	GO:0009627: systemic acquired resistance	2.27E-02
112	GO:0042128: nitrate assimilation	2.27E-02
113	GO:0006970: response to osmotic stress	2.51E-02
114	GO:0006499: N-terminal protein myristoylation	2.72E-02
115	GO:0009631: cold acclimation	2.82E-02
116	GO:0048527: lateral root development	2.82E-02
117	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.99E-02
118	GO:0009867: jasmonic acid mediated signaling pathway	3.01E-02
119	GO:0045087: innate immune response	3.01E-02
120	GO:0044550: secondary metabolite biosynthetic process	3.15E-02
121	GO:0006839: mitochondrial transport	3.30E-02
122	GO:0006887: exocytosis	3.40E-02
123	GO:0045892: negative regulation of transcription, DNA-templated	3.52E-02
124	GO:0009640: photomorphogenesis	3.60E-02
125	GO:0008643: carbohydrate transport	3.81E-02
126	GO:0031347: regulation of defense response	4.12E-02
127	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.12E-02
128	GO:0000165: MAPK cascade	4.12E-02
129	GO:0009751: response to salicylic acid	4.20E-02
130	GO:0048364: root development	4.44E-02
131	GO:0009909: regulation of flower development	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0052821: DNA-7-methyladenine glycosylase activity	0.00E+00
2	GO:0003905: alkylbase DNA N-glycosylase activity	0.00E+00
3	GO:0005522: profilin binding	0.00E+00
4	GO:0004107: chorismate synthase activity	0.00E+00
5	GO:0052822: DNA-3-methylguanine glycosylase activity	0.00E+00
6	GO:0043916: DNA-7-methylguanine glycosylase activity	0.00E+00
7	GO:2001080: chitosan binding	0.00E+00
8	GO:0016301: kinase activity	4.97E-06
9	GO:0004674: protein serine/threonine kinase activity	1.73E-05
10	GO:0019199: transmembrane receptor protein kinase activity	2.11E-05
11	GO:0005515: protein binding	3.02E-05
12	GO:0005524: ATP binding	3.04E-05
13	GO:0043531: ADP binding	1.39E-04
14	GO:1901149: salicylic acid binding	1.64E-04
15	GO:0090422: thiamine pyrophosphate transporter activity	1.64E-04
16	GO:1990188: euchromatin binding	1.64E-04
17	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.64E-04
18	GO:0019948: SUMO activating enzyme activity	6.11E-04
19	GO:0016174: NAD(P)H oxidase activity	6.11E-04
20	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	8.73E-04
21	GO:0019201: nucleotide kinase activity	8.73E-04
22	GO:0008725: DNA-3-methyladenine glycosylase activity	1.47E-03
23	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.47E-03
24	GO:0004017: adenylate kinase activity	2.17E-03
25	GO:0003730: mRNA 3'-UTR binding	2.17E-03
26	GO:0004559: alpha-mannosidase activity	2.17E-03
27	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.27E-03
28	GO:0008375: acetylglucosaminyltransferase activity	2.39E-03
29	GO:0005525: GTP binding	2.49E-03
30	GO:0004708: MAP kinase kinase activity	2.95E-03
31	GO:0005509: calcium ion binding	3.11E-03
32	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.37E-03
33	GO:0071949: FAD binding	3.81E-03
34	GO:0015112: nitrate transmembrane transporter activity	4.27E-03
35	GO:0005545: 1-phosphatidylinositol binding	4.75E-03
36	GO:0008047: enzyme activator activity	4.75E-03
37	GO:0005543: phospholipid binding	5.25E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	5.25E-03
39	GO:0008378: galactosyltransferase activity	5.77E-03
40	GO:0031072: heat shock protein binding	6.30E-03
41	GO:0015171: amino acid transmembrane transporter activity	6.75E-03
42	GO:0031625: ubiquitin protein ligase binding	6.75E-03
43	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.85E-03
44	GO:0008061: chitin binding	7.41E-03
45	GO:0043565: sequence-specific DNA binding	8.30E-03
46	GO:0003779: actin binding	8.42E-03
47	GO:0043130: ubiquitin binding	8.59E-03
48	GO:0003924: GTPase activity	9.29E-03
49	GO:0008514: organic anion transmembrane transporter activity	1.18E-02
50	GO:0003756: protein disulfide isomerase activity	1.18E-02
51	GO:0030276: clathrin binding	1.39E-02
52	GO:0010181: FMN binding	1.47E-02
53	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.77E-02
54	GO:0051015: actin filament binding	1.77E-02
55	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.94E-02
56	GO:0005200: structural constituent of cytoskeleton	1.94E-02
57	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.27E-02
58	GO:0004672: protein kinase activity	2.36E-02
59	GO:0004683: calmodulin-dependent protein kinase activity	2.36E-02
60	GO:0004722: protein serine/threonine phosphatase activity	3.79E-02
61	GO:0044212: transcription regulatory region DNA binding	4.62E-02
62	GO:0008234: cysteine-type peptidase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.30E-05
2	GO:0005911: cell-cell junction	1.64E-04
3	GO:0005901: caveola	3.73E-04
4	GO:0030139: endocytic vesicle	6.11E-04
5	GO:0005885: Arp2/3 protein complex	2.17E-03
6	GO:0000815: ESCRT III complex	2.17E-03
7	GO:0000123: histone acetyltransferase complex	2.55E-03
8	GO:0005768: endosome	2.98E-03
9	GO:0090404: pollen tube tip	5.25E-03
10	GO:0005795: Golgi stack	7.41E-03
11	GO:0005829: cytosol	8.58E-03
12	GO:0005905: clathrin-coated pit	9.84E-03
13	GO:0005654: nucleoplasm	1.06E-02
14	GO:0030136: clathrin-coated vesicle	1.25E-02
15	GO:0009504: cell plate	1.54E-02
16	GO:0000145: exocyst	1.70E-02
17	GO:0005794: Golgi apparatus	2.36E-02
18	GO:0019005: SCF ubiquitin ligase complex	2.54E-02
19	GO:0000325: plant-type vacuole	2.82E-02
20	GO:0031902: late endosome membrane	3.40E-02
21	GO:0090406: pollen tube	3.60E-02
22	GO:0005856: cytoskeleton	3.91E-02
23	GO:0005635: nuclear envelope	4.67E-02