Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G04540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010618: aerenchyma formation3.65E-05
2GO:0048544: recognition of pollen4.82E-05
3GO:0033014: tetrapyrrole biosynthetic process9.94E-05
4GO:0061088: regulation of sequestering of zinc ion1.37E-04
5GO:0000304: response to singlet oxygen1.78E-04
6GO:0051707: response to other organism1.97E-04
7GO:0010337: regulation of salicylic acid metabolic process2.22E-04
8GO:0010942: positive regulation of cell death2.22E-04
9GO:0010310: regulation of hydrogen peroxide metabolic process2.68E-04
10GO:0006783: heme biosynthetic process4.68E-04
11GO:0006779: porphyrin-containing compound biosynthetic process5.23E-04
12GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.23E-04
13GO:0006782: protoporphyrinogen IX biosynthetic process5.78E-04
14GO:0055046: microgametogenesis7.52E-04
15GO:0006829: zinc II ion transport7.52E-04
16GO:0006071: glycerol metabolic process9.38E-04
17GO:0010200: response to chitin1.24E-03
18GO:0006952: defense response1.27E-03
19GO:0009561: megagametogenesis1.34E-03
20GO:0006629: lipid metabolic process1.75E-03
21GO:0008152: metabolic process1.92E-03
22GO:0001666: response to hypoxia2.30E-03
23GO:0009627: systemic acquired resistance2.48E-03
24GO:0015995: chlorophyll biosynthetic process2.57E-03
25GO:0010043: response to zinc ion3.03E-03
26GO:0016567: protein ubiquitination3.18E-03
27GO:0009636: response to toxic substance4.15E-03
28GO:0009626: plant-type hypersensitive response5.50E-03
29GO:0009742: brassinosteroid mediated signaling pathway6.22E-03
30GO:0010468: regulation of gene expression9.90E-03
31GO:0007165: signal transduction1.28E-02
32GO:0009723: response to ethylene1.32E-02
33GO:0046777: protein autophosphorylation1.45E-02
34GO:0009753: response to jasmonic acid1.92E-02
35GO:0009651: response to salt stress2.08E-02
36GO:0006357: regulation of transcription from RNA polymerase II promoter2.23E-02
37GO:0035556: intracellular signal transduction2.85E-02
38GO:0009414: response to water deprivation4.46E-02
39GO:0042742: defense response to bacterium4.54E-02
40GO:0006979: response to oxidative stress4.56E-02
41GO:0006468: protein phosphorylation4.77E-02
42GO:0030154: cell differentiation4.82E-02
43GO:0009733: response to auxin4.93E-02
RankGO TermAdjusted P value
1GO:0102425: myricetin 3-O-glucosyltransferase activity1.81E-06
2GO:0102360: daphnetin 3-O-glucosyltransferase activity1.81E-06
3GO:0047893: flavonol 3-O-glucosyltransferase activity2.45E-06
4GO:0046027: phospholipid:diacylglycerol acyltransferase activity1.39E-05
5GO:0035251: UDP-glucosyltransferase activity2.43E-05
6GO:0008883: glutamyl-tRNA reductase activity3.65E-05
7GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.37E-04
8GO:0008374: O-acyltransferase activity1.78E-04
9GO:0015562: efflux transmembrane transporter activity2.22E-04
10GO:0015103: inorganic anion transmembrane transporter activity3.15E-04
11GO:0080043: quercetin 3-O-glucosyltransferase activity3.49E-04
12GO:0080044: quercetin 7-O-glucosyltransferase activity3.49E-04
13GO:0016758: transferase activity, transferring hexosyl groups4.63E-04
14GO:0008194: UDP-glycosyltransferase activity7.21E-04
15GO:0019888: protein phosphatase regulator activity7.52E-04
16GO:0005385: zinc ion transmembrane transporter activity1.00E-03
17GO:0004707: MAP kinase activity1.13E-03
18GO:0004842: ubiquitin-protein transferase activity1.18E-03
19GO:0004806: triglyceride lipase activity2.57E-03
20GO:0050661: NADP binding3.52E-03
21GO:0030246: carbohydrate binding4.10E-03
22GO:0016298: lipase activity4.81E-03
23GO:0004674: protein serine/threonine kinase activity5.86E-03
24GO:0004675: transmembrane receptor protein serine/threonine kinase activity8.32E-03
25GO:0004672: protein kinase activity9.04E-03
26GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.57E-02
27GO:0042803: protein homodimerization activity1.62E-02
28GO:0004871: signal transducer activity1.62E-02
29GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.70E-02
30GO:0016757: transferase activity, transferring glycosyl groups2.10E-02
31GO:0016301: kinase activity2.77E-02
32GO:0005516: calmodulin binding3.67E-02
33GO:0044212: transcription regulatory region DNA binding4.54E-02
RankGO TermAdjusted P value
1GO:0000159: protein phosphatase type 2A complex6.34E-04
2GO:0005770: late endosome1.56E-03
3GO:0043231: intracellular membrane-bounded organelle1.92E-03
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Gene type



Gene DE type