GO Enrichment Analysis of Co-expressed Genes with
AT4G04330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 5.14E-10 |
| 3 | GO:0015995: chlorophyll biosynthetic process | 9.09E-08 |
| 4 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.86E-07 |
| 5 | GO:0006000: fructose metabolic process | 2.22E-06 |
| 6 | GO:0090391: granum assembly | 2.22E-06 |
| 7 | GO:0005983: starch catabolic process | 3.95E-06 |
| 8 | GO:0010021: amylopectin biosynthetic process | 9.95E-06 |
| 9 | GO:0010196: nonphotochemical quenching | 4.78E-05 |
| 10 | GO:0055114: oxidation-reduction process | 6.18E-05 |
| 11 | GO:0006002: fructose 6-phosphate metabolic process | 7.89E-05 |
| 12 | GO:0010206: photosystem II repair | 9.74E-05 |
| 13 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.06E-04 |
| 14 | GO:0000023: maltose metabolic process | 1.06E-04 |
| 15 | GO:0000025: maltose catabolic process | 1.06E-04 |
| 16 | GO:0005980: glycogen catabolic process | 1.06E-04 |
| 17 | GO:0009631: cold acclimation | 1.57E-04 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 1.65E-04 |
| 19 | GO:0006094: gluconeogenesis | 2.19E-04 |
| 20 | GO:0005986: sucrose biosynthetic process | 2.19E-04 |
| 21 | GO:0015804: neutral amino acid transport | 2.48E-04 |
| 22 | GO:0005976: polysaccharide metabolic process | 2.48E-04 |
| 23 | GO:0010353: response to trehalose | 2.48E-04 |
| 24 | GO:0010114: response to red light | 2.53E-04 |
| 25 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.14E-04 |
| 26 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.85E-04 |
| 27 | GO:0006518: peptide metabolic process | 4.12E-04 |
| 28 | GO:0019252: starch biosynthetic process | 7.87E-04 |
| 29 | GO:0000302: response to reactive oxygen species | 8.40E-04 |
| 30 | GO:0016123: xanthophyll biosynthetic process | 9.92E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 1.19E-03 |
| 32 | GO:0010019: chloroplast-nucleus signaling pathway | 1.45E-03 |
| 33 | GO:0016311: dephosphorylation | 1.47E-03 |
| 34 | GO:0018298: protein-chromophore linkage | 1.54E-03 |
| 35 | GO:0009735: response to cytokinin | 1.58E-03 |
| 36 | GO:0009610: response to symbiotic fungus | 1.70E-03 |
| 37 | GO:0009772: photosynthetic electron transport in photosystem II | 1.70E-03 |
| 38 | GO:0010218: response to far red light | 1.70E-03 |
| 39 | GO:0009637: response to blue light | 1.94E-03 |
| 40 | GO:0005978: glycogen biosynthetic process | 1.97E-03 |
| 41 | GO:0030091: protein repair | 1.97E-03 |
| 42 | GO:0034599: cellular response to oxidative stress | 2.03E-03 |
| 43 | GO:0006754: ATP biosynthetic process | 2.53E-03 |
| 44 | GO:0010205: photoinhibition | 2.84E-03 |
| 45 | GO:0005982: starch metabolic process | 2.84E-03 |
| 46 | GO:0009688: abscisic acid biosynthetic process | 3.15E-03 |
| 47 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.47E-03 |
| 48 | GO:0009750: response to fructose | 3.47E-03 |
| 49 | GO:0032259: methylation | 4.07E-03 |
| 50 | GO:0018107: peptidyl-threonine phosphorylation | 4.16E-03 |
| 51 | GO:0009266: response to temperature stimulus | 4.52E-03 |
| 52 | GO:0019253: reductive pentose-phosphate cycle | 4.52E-03 |
| 53 | GO:0005985: sucrose metabolic process | 4.88E-03 |
| 54 | GO:0071732: cellular response to nitric oxide | 4.88E-03 |
| 55 | GO:0006979: response to oxidative stress | 5.35E-03 |
| 56 | GO:0003333: amino acid transmembrane transport | 6.46E-03 |
| 57 | GO:0042744: hydrogen peroxide catabolic process | 6.76E-03 |
| 58 | GO:0035428: hexose transmembrane transport | 6.87E-03 |
| 59 | GO:0019748: secondary metabolic process | 6.87E-03 |
| 60 | GO:0071369: cellular response to ethylene stimulus | 7.30E-03 |
| 61 | GO:0006633: fatty acid biosynthetic process | 7.46E-03 |
| 62 | GO:0070417: cellular response to cold | 8.19E-03 |
| 63 | GO:0006606: protein import into nucleus | 8.64E-03 |
| 64 | GO:0010182: sugar mediated signaling pathway | 9.10E-03 |
| 65 | GO:0046323: glucose import | 9.10E-03 |
| 66 | GO:0006810: transport | 9.47E-03 |
| 67 | GO:0015986: ATP synthesis coupled proton transport | 9.58E-03 |
| 68 | GO:0071281: cellular response to iron ion | 1.16E-02 |
| 69 | GO:0009658: chloroplast organization | 1.27E-02 |
| 70 | GO:0009723: response to ethylene | 1.47E-02 |
| 71 | GO:0080167: response to karrikin | 1.58E-02 |
| 72 | GO:0009817: defense response to fungus, incompatible interaction | 1.65E-02 |
| 73 | GO:0007568: aging | 1.83E-02 |
| 74 | GO:0006865: amino acid transport | 1.89E-02 |
| 75 | GO:0006629: lipid metabolic process | 2.33E-02 |
| 76 | GO:0006812: cation transport | 2.75E-02 |
| 77 | GO:0018105: peptidyl-serine phosphorylation | 3.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 3 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 6 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.86E-07 |
| 7 | GO:0004130: cytochrome-c peroxidase activity | 2.49E-05 |
| 8 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.06E-04 |
| 9 | GO:0050521: alpha-glucan, water dikinase activity | 1.06E-04 |
| 10 | GO:0008184: glycogen phosphorylase activity | 1.06E-04 |
| 11 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.06E-04 |
| 12 | GO:0045485: omega-6 fatty acid desaturase activity | 1.06E-04 |
| 13 | GO:0004134: 4-alpha-glucanotransferase activity | 1.06E-04 |
| 14 | GO:0004645: phosphorylase activity | 1.06E-04 |
| 15 | GO:0010297: heteropolysaccharide binding | 2.48E-04 |
| 16 | GO:0033201: alpha-1,4-glucan synthase activity | 2.48E-04 |
| 17 | GO:0018708: thiol S-methyltransferase activity | 2.48E-04 |
| 18 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.48E-04 |
| 19 | GO:0016630: protochlorophyllide reductase activity | 2.48E-04 |
| 20 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.48E-04 |
| 21 | GO:0015172: acidic amino acid transmembrane transporter activity | 2.48E-04 |
| 22 | GO:0042389: omega-3 fatty acid desaturase activity | 2.48E-04 |
| 23 | GO:0031409: pigment binding | 3.14E-04 |
| 24 | GO:0004324: ferredoxin-NADP+ reductase activity | 4.12E-04 |
| 25 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.12E-04 |
| 26 | GO:0043169: cation binding | 4.12E-04 |
| 27 | GO:0004373: glycogen (starch) synthase activity | 4.12E-04 |
| 28 | GO:0070402: NADPH binding | 4.12E-04 |
| 29 | GO:0019201: nucleotide kinase activity | 5.92E-04 |
| 30 | GO:0015175: neutral amino acid transmembrane transporter activity | 5.92E-04 |
| 31 | GO:0016851: magnesium chelatase activity | 5.92E-04 |
| 32 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.86E-04 |
| 33 | GO:0009011: starch synthase activity | 7.86E-04 |
| 34 | GO:0003959: NADPH dehydrogenase activity | 9.92E-04 |
| 35 | GO:2001070: starch binding | 1.21E-03 |
| 36 | GO:0016688: L-ascorbate peroxidase activity | 1.21E-03 |
| 37 | GO:0008200: ion channel inhibitor activity | 1.21E-03 |
| 38 | GO:0016168: chlorophyll binding | 1.26E-03 |
| 39 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.45E-03 |
| 40 | GO:0004017: adenylate kinase activity | 1.45E-03 |
| 41 | GO:0004602: glutathione peroxidase activity | 1.45E-03 |
| 42 | GO:0008168: methyltransferase activity | 1.91E-03 |
| 43 | GO:0004033: aldo-keto reductase (NADP) activity | 1.97E-03 |
| 44 | GO:0016491: oxidoreductase activity | 1.99E-03 |
| 45 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.24E-03 |
| 46 | GO:0071949: FAD binding | 2.53E-03 |
| 47 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.70E-03 |
| 48 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 2.84E-03 |
| 49 | GO:0030234: enzyme regulator activity | 3.15E-03 |
| 50 | GO:0047372: acylglycerol lipase activity | 3.47E-03 |
| 51 | GO:0015386: potassium:proton antiporter activity | 3.47E-03 |
| 52 | GO:0004565: beta-galactosidase activity | 4.16E-03 |
| 53 | GO:0031072: heat shock protein binding | 4.16E-03 |
| 54 | GO:0008266: poly(U) RNA binding | 4.52E-03 |
| 55 | GO:0005528: FK506 binding | 5.65E-03 |
| 56 | GO:0015079: potassium ion transmembrane transporter activity | 6.05E-03 |
| 57 | GO:0003756: protein disulfide isomerase activity | 7.74E-03 |
| 58 | GO:0008536: Ran GTPase binding | 9.10E-03 |
| 59 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 9.10E-03 |
| 60 | GO:0005355: glucose transmembrane transporter activity | 9.58E-03 |
| 61 | GO:0048038: quinone binding | 1.06E-02 |
| 62 | GO:0016788: hydrolase activity, acting on ester bonds | 1.30E-02 |
| 63 | GO:0046872: metal ion binding | 1.32E-02 |
| 64 | GO:0016787: hydrolase activity | 1.67E-02 |
| 65 | GO:0004222: metalloendopeptidase activity | 1.77E-02 |
| 66 | GO:0003993: acid phosphatase activity | 2.02E-02 |
| 67 | GO:0004185: serine-type carboxypeptidase activity | 2.34E-02 |
| 68 | GO:0005198: structural molecule activity | 2.54E-02 |
| 69 | GO:0015293: symporter activity | 2.54E-02 |
| 70 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.61E-02 |
| 71 | GO:0015171: amino acid transmembrane transporter activity | 3.11E-02 |
| 72 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.33E-02 |
| 73 | GO:0051082: unfolded protein binding | 3.72E-02 |
| 74 | GO:0015035: protein disulfide oxidoreductase activity | 3.80E-02 |
| 75 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.45E-02 |
| 76 | GO:0030170: pyridoxal phosphate binding | 4.70E-02 |
| 77 | GO:0008565: protein transporter activity | 4.95E-02 |
| 78 | GO:0015144: carbohydrate transmembrane transporter activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 2.86E-36 |
| 3 | GO:0009534: chloroplast thylakoid | 3.63E-34 |
| 4 | GO:0009507: chloroplast | 1.23E-30 |
| 5 | GO:0009941: chloroplast envelope | 1.23E-21 |
| 6 | GO:0009579: thylakoid | 9.81E-15 |
| 7 | GO:0010287: plastoglobule | 1.11E-10 |
| 8 | GO:0009570: chloroplast stroma | 6.94E-09 |
| 9 | GO:0031969: chloroplast membrane | 3.56E-06 |
| 10 | GO:0009706: chloroplast inner membrane | 5.36E-05 |
| 11 | GO:0009501: amyloplast | 6.23E-05 |
| 12 | GO:0009538: photosystem I reaction center | 6.23E-05 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 8.15E-05 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 9.74E-05 |
| 15 | GO:0031977: thylakoid lumen | 2.27E-04 |
| 16 | GO:0031357: integral component of chloroplast inner membrane | 2.48E-04 |
| 17 | GO:0010007: magnesium chelatase complex | 4.12E-04 |
| 18 | GO:0009522: photosystem I | 7.35E-04 |
| 19 | GO:0009544: chloroplast ATP synthase complex | 7.86E-04 |
| 20 | GO:0009523: photosystem II | 7.87E-04 |
| 21 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.21E-03 |
| 22 | GO:0016020: membrane | 3.40E-03 |
| 23 | GO:0030076: light-harvesting complex | 4.88E-03 |
| 24 | GO:0042651: thylakoid membrane | 6.05E-03 |
| 25 | GO:0010319: stromule | 1.26E-02 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.37E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 1.65E-02 |
| 28 | GO:0016021: integral component of membrane | 3.04E-02 |