co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G04220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
6	GO:0002376: immune system process	0.00E+00
7	GO:0010324: membrane invagination	0.00E+00
8	GO:0042742: defense response to bacterium	4.57E-06
9	GO:0006979: response to oxidative stress	4.73E-06
10	GO:0042391: regulation of membrane potential	6.61E-06
11	GO:0006952: defense response	5.48E-05
12	GO:0050832: defense response to fungus	6.91E-05
13	GO:0071456: cellular response to hypoxia	9.34E-05
14	GO:1900057: positive regulation of leaf senescence	1.57E-04
15	GO:0031347: regulation of defense response	1.58E-04
16	GO:1902600: hydrogen ion transmembrane transport	2.27E-04
17	GO:0048508: embryonic meristem development	2.27E-04
18	GO:0080173: male-female gamete recognition during double fertilization	2.27E-04
19	GO:0033306: phytol metabolic process	2.27E-04
20	GO:0009700: indole phytoalexin biosynthetic process	2.27E-04
21	GO:0010230: alternative respiration	2.27E-04
22	GO:0034214: protein hexamerization	2.27E-04
23	GO:0050691: regulation of defense response to virus by host	2.27E-04
24	GO:1990542: mitochondrial transmembrane transport	2.27E-04
25	GO:0032107: regulation of response to nutrient levels	2.27E-04
26	GO:0010120: camalexin biosynthetic process	2.48E-04
27	GO:0006098: pentose-phosphate shunt	3.00E-04
28	GO:0010112: regulation of systemic acquired resistance	3.00E-04
29	GO:0010200: response to chitin	4.55E-04
30	GO:0015914: phospholipid transport	5.05E-04
31	GO:0009838: abscission	5.05E-04
32	GO:0080181: lateral root branching	5.05E-04
33	GO:0055088: lipid homeostasis	5.05E-04
34	GO:0019521: D-gluconate metabolic process	5.05E-04
35	GO:0015908: fatty acid transport	5.05E-04
36	GO:0044419: interspecies interaction between organisms	5.05E-04
37	GO:0009945: radial axis specification	5.05E-04
38	GO:0051258: protein polymerization	5.05E-04
39	GO:0071668: plant-type cell wall assembly	5.05E-04
40	GO:0002237: response to molecule of bacterial origin	7.06E-04
41	GO:0010366: negative regulation of ethylene biosynthetic process	8.21E-04
42	GO:0015695: organic cation transport	8.21E-04
43	GO:0002230: positive regulation of defense response to virus by host	8.21E-04
44	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	8.21E-04
45	GO:1900055: regulation of leaf senescence	8.21E-04
46	GO:0009751: response to salicylic acid	8.34E-04
47	GO:2000377: regulation of reactive oxygen species metabolic process	9.67E-04
48	GO:0009636: response to toxic substance	1.13E-03
49	GO:0006020: inositol metabolic process	1.17E-03
50	GO:0015696: ammonium transport	1.17E-03
51	GO:0051289: protein homotetramerization	1.17E-03
52	GO:1902290: positive regulation of defense response to oomycetes	1.17E-03
53	GO:0006012: galactose metabolic process	1.38E-03
54	GO:0048638: regulation of developmental growth	1.56E-03
55	GO:0072488: ammonium transmembrane transport	1.56E-03
56	GO:0006621: protein retention in ER lumen	1.56E-03
57	GO:1901141: regulation of lignin biosynthetic process	1.56E-03
58	GO:0016094: polyprenol biosynthetic process	1.99E-03
59	GO:0034052: positive regulation of plant-type hypersensitive response	1.99E-03
60	GO:0009164: nucleoside catabolic process	1.99E-03
61	GO:0031365: N-terminal protein amino acid modification	1.99E-03
62	GO:0010256: endomembrane system organization	2.45E-03
63	GO:0009117: nucleotide metabolic process	2.45E-03
64	GO:0006574: valine catabolic process	2.45E-03
65	GO:0009643: photosynthetic acclimation	2.45E-03
66	GO:0009759: indole glucosinolate biosynthetic process	2.45E-03
67	GO:0009094: L-phenylalanine biosynthetic process	2.94E-03
68	GO:0042372: phylloquinone biosynthetic process	2.94E-03
69	GO:0009942: longitudinal axis specification	2.94E-03
70	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.47E-03
71	GO:0043090: amino acid import	3.47E-03
72	GO:1900056: negative regulation of leaf senescence	3.47E-03
73	GO:0050829: defense response to Gram-negative bacterium	3.47E-03
74	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.47E-03
75	GO:0009627: systemic acquired resistance	3.75E-03
76	GO:0006468: protein phosphorylation	3.88E-03
77	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.02E-03
78	GO:0009819: drought recovery	4.02E-03
79	GO:0030091: protein repair	4.02E-03
80	GO:0010150: leaf senescence	4.43E-03
81	GO:0010208: pollen wall assembly	4.60E-03
82	GO:0010311: lateral root formation	4.60E-03
83	GO:0006997: nucleus organization	4.60E-03
84	GO:0010204: defense response signaling pathway, resistance gene-independent	4.60E-03
85	GO:0030968: endoplasmic reticulum unfolded protein response	4.60E-03
86	GO:0009407: toxin catabolic process	4.82E-03
87	GO:0007568: aging	5.06E-03
88	GO:0019432: triglyceride biosynthetic process	5.22E-03
89	GO:0007166: cell surface receptor signaling pathway	5.25E-03
90	GO:0009867: jasmonic acid mediated signaling pathway	5.54E-03
91	GO:0009617: response to bacterium	5.54E-03
92	GO:1900426: positive regulation of defense response to bacterium	5.85E-03
93	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.85E-03
94	GO:0019538: protein metabolic process	6.51E-03
95	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.51E-03
96	GO:0006032: chitin catabolic process	6.51E-03
97	GO:0009684: indoleacetic acid biosynthetic process	7.20E-03
98	GO:1903507: negative regulation of nucleic acid-templated transcription	7.20E-03
99	GO:0048229: gametophyte development	7.20E-03
100	GO:0012501: programmed cell death	7.92E-03
101	GO:0009611: response to wounding	9.47E-03
102	GO:0006813: potassium ion transport	9.64E-03
103	GO:0007165: signal transduction	9.78E-03
104	GO:0080167: response to karrikin	1.01E-02
105	GO:0009225: nucleotide-sugar metabolic process	1.02E-02
106	GO:0042343: indole glucosinolate metabolic process	1.02E-02
107	GO:0000162: tryptophan biosynthetic process	1.10E-02
108	GO:0080147: root hair cell development	1.19E-02
109	GO:0009626: plant-type hypersensitive response	1.22E-02
110	GO:0043622: cortical microtubule organization	1.27E-02
111	GO:0098542: defense response to other organism	1.36E-02
112	GO:0009269: response to desiccation	1.36E-02
113	GO:0016998: cell wall macromolecule catabolic process	1.36E-02
114	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.45E-02
115	GO:0009625: response to insect	1.54E-02
116	GO:0070417: cellular response to cold	1.73E-02
117	GO:0009753: response to jasmonic acid	1.82E-02
118	GO:0000271: polysaccharide biosynthetic process	1.83E-02
119	GO:0000413: protein peptidyl-prolyl isomerization	1.83E-02
120	GO:0045489: pectin biosynthetic process	1.93E-02
121	GO:0006885: regulation of pH	1.93E-02
122	GO:0006520: cellular amino acid metabolic process	1.93E-02
123	GO:0048868: pollen tube development	1.93E-02
124	GO:0009646: response to absence of light	2.03E-02
125	GO:0006623: protein targeting to vacuole	2.14E-02
126	GO:0000302: response to reactive oxygen species	2.24E-02
127	GO:0071805: potassium ion transmembrane transport	2.68E-02
128	GO:0009615: response to virus	2.91E-02
129	GO:0006950: response to stress	3.27E-02
130	GO:0055114: oxidation-reduction process	3.66E-02
131	GO:0009631: cold acclimation	3.90E-02
132	GO:0048527: lateral root development	3.90E-02
133	GO:0006865: amino acid transport	4.03E-02
134	GO:0009853: photorespiration	4.17E-02
135	GO:0016051: carbohydrate biosynthetic process	4.17E-02
136	GO:0006810: transport	4.60E-02
137	GO:0006897: endocytosis	4.71E-02
138	GO:0044550: secondary metabolite biosynthetic process	4.94E-02
139	GO:0051707: response to other organism	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0030552: cAMP binding	9.96E-07
3	GO:0030553: cGMP binding	9.96E-07
4	GO:0005216: ion channel activity	2.07E-06
5	GO:0005249: voltage-gated potassium channel activity	6.61E-06
6	GO:0030551: cyclic nucleotide binding	6.61E-06
7	GO:0016301: kinase activity	2.33E-05
8	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.19E-04
9	GO:2001227: quercitrin binding	2.27E-04
10	GO:0019707: protein-cysteine S-acyltransferase activity	2.27E-04
11	GO:0047940: glucuronokinase activity	2.27E-04
12	GO:2001147: camalexin binding	2.27E-04
13	GO:0015245: fatty acid transporter activity	2.27E-04
14	GO:0050736: O-malonyltransferase activity	5.05E-04
15	GO:0004385: guanylate kinase activity	5.05E-04
16	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	8.21E-04
17	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	8.21E-04
18	GO:0032403: protein complex binding	8.21E-04
19	GO:0004674: protein serine/threonine kinase activity	1.12E-03
20	GO:0017077: oxidative phosphorylation uncoupler activity	1.17E-03
21	GO:0022890: inorganic cation transmembrane transporter activity	1.17E-03
22	GO:0047769: arogenate dehydratase activity	1.56E-03
23	GO:0004834: tryptophan synthase activity	1.56E-03
24	GO:0004664: prephenate dehydratase activity	1.56E-03
25	GO:0046923: ER retention sequence binding	1.56E-03
26	GO:0050378: UDP-glucuronate 4-epimerase activity	1.56E-03
27	GO:0009916: alternative oxidase activity	1.56E-03
28	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.99E-03
29	GO:0002094: polyprenyltransferase activity	1.99E-03
30	GO:0015299: solute:proton antiporter activity	2.03E-03
31	GO:0008519: ammonium transmembrane transporter activity	2.45E-03
32	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.94E-03
33	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.94E-03
34	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.94E-03
35	GO:0005261: cation channel activity	2.94E-03
36	GO:0003978: UDP-glucose 4-epimerase activity	2.94E-03
37	GO:0004144: diacylglycerol O-acyltransferase activity	2.94E-03
38	GO:0004656: procollagen-proline 4-dioxygenase activity	2.94E-03
39	GO:0043565: sequence-specific DNA binding	3.35E-03
40	GO:0008235: metalloexopeptidase activity	3.47E-03
41	GO:0008320: protein transmembrane transporter activity	3.47E-03
42	GO:0043295: glutathione binding	3.47E-03
43	GO:0004806: triglyceride lipase activity	3.95E-03
44	GO:0030247: polysaccharide binding	3.95E-03
45	GO:0004034: aldose 1-epimerase activity	4.02E-03
46	GO:0004033: aldo-keto reductase (NADP) activity	4.02E-03
47	GO:0005516: calmodulin binding	4.77E-03
48	GO:0071949: FAD binding	5.22E-03
49	GO:0047617: acyl-CoA hydrolase activity	5.85E-03
50	GO:0004568: chitinase activity	6.51E-03
51	GO:0004364: glutathione transferase activity	6.86E-03
52	GO:0015386: potassium:proton antiporter activity	7.20E-03
53	GO:0004177: aminopeptidase activity	7.20E-03
54	GO:0043531: ADP binding	8.67E-03
55	GO:0008266: poly(U) RNA binding	9.42E-03
56	GO:0004497: monooxygenase activity	1.01E-02
57	GO:0001046: core promoter sequence-specific DNA binding	1.19E-02
58	GO:0003714: transcription corepressor activity	1.19E-02
59	GO:0015079: potassium ion transmembrane transporter activity	1.27E-02
60	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.36E-02
61	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.41E-02
62	GO:0030246: carbohydrate binding	1.44E-02
63	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.45E-02
64	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.64E-02
65	GO:0016758: transferase activity, transferring hexosyl groups	1.68E-02
66	GO:0005451: monovalent cation:proton antiporter activity	1.83E-02
67	GO:0016853: isomerase activity	2.03E-02
68	GO:0050662: coenzyme binding	2.03E-02
69	GO:0004872: receptor activity	2.14E-02
70	GO:0005509: calcium ion binding	2.34E-02
71	GO:0005524: ATP binding	2.40E-02
72	GO:0015385: sodium:proton antiporter activity	2.46E-02
73	GO:0016757: transferase activity, transferring glycosyl groups	2.49E-02
74	GO:0016791: phosphatase activity	2.57E-02
75	GO:0008194: UDP-glycosyltransferase activity	2.67E-02
76	GO:0008483: transaminase activity	2.68E-02
77	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.68E-02
78	GO:0016597: amino acid binding	2.80E-02
79	GO:0008375: acetylglucosaminyltransferase activity	3.15E-02
80	GO:0004721: phosphoprotein phosphatase activity	3.27E-02
81	GO:0030145: manganese ion binding	3.90E-02
82	GO:0050897: cobalt ion binding	3.90E-02
83	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.17E-02
84	GO:0008233: peptidase activity	4.48E-02
85	GO:0050661: NADP binding	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0016021: integral component of membrane	3.70E-07
3	GO:0005886: plasma membrane	7.66E-05
4	GO:0000138: Golgi trans cisterna	2.27E-04
5	GO:0005802: trans-Golgi network	3.85E-04
6	GO:0005901: caveola	5.05E-04
7	GO:0005794: Golgi apparatus	6.97E-04
8	GO:0005887: integral component of plasma membrane	1.45E-03
9	GO:0005768: endosome	1.88E-03
10	GO:0000813: ESCRT I complex	1.99E-03
11	GO:0031225: anchored component of membrane	5.08E-03
12	GO:0005789: endoplasmic reticulum membrane	5.35E-03
13	GO:0005769: early endosome	1.10E-02
14	GO:0070469: respiratory chain	1.27E-02
15	GO:0005770: late endosome	1.93E-02
16	GO:0009504: cell plate	2.14E-02
17	GO:0031965: nuclear membrane	2.14E-02
18	GO:0032580: Golgi cisterna membrane	2.57E-02
19	GO:0005777: peroxisome	4.05E-02
20	GO:0031902: late endosome membrane	4.71E-02