co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G03070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
2	GO:0045176: apical protein localization	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0006664: glycolipid metabolic process	0.00E+00
5	GO:0034757: negative regulation of iron ion transport	2.34E-04
6	GO:0010271: regulation of chlorophyll catabolic process	5.20E-04
7	GO:0010582: floral meristem determinacy	5.76E-04
8	GO:0080117: secondary growth	8.44E-04
9	GO:0071398: cellular response to fatty acid	8.44E-04
10	GO:0005992: trehalose biosynthetic process	1.01E-03
11	GO:0010371: regulation of gibberellin biosynthetic process	1.20E-03
12	GO:0051513: regulation of monopolar cell growth	1.20E-03
13	GO:0034059: response to anoxia	1.20E-03
14	GO:1990019: protein storage vacuole organization	1.20E-03
15	GO:0009800: cinnamic acid biosynthetic process	1.20E-03
16	GO:0071215: cellular response to abscisic acid stimulus	1.44E-03
17	GO:0009686: gibberellin biosynthetic process	1.44E-03
18	GO:0006021: inositol biosynthetic process	1.61E-03
19	GO:0009755: hormone-mediated signaling pathway	1.61E-03
20	GO:0009741: response to brassinosteroid	1.97E-03
21	GO:0010268: brassinosteroid homeostasis	1.97E-03
22	GO:0010438: cellular response to sulfur starvation	2.05E-03
23	GO:0010158: abaxial cell fate specification	2.05E-03
24	GO:0009696: salicylic acid metabolic process	2.05E-03
25	GO:0045487: gibberellin catabolic process	2.05E-03
26	GO:0016131: brassinosteroid metabolic process	2.05E-03
27	GO:0048827: phyllome development	2.52E-03
28	GO:0009416: response to light stimulus	2.52E-03
29	GO:0010358: leaf shaping	2.52E-03
30	GO:0006559: L-phenylalanine catabolic process	2.52E-03
31	GO:0048831: regulation of shoot system development	2.52E-03
32	GO:0003006: developmental process involved in reproduction	2.52E-03
33	GO:0009639: response to red or far red light	2.94E-03
34	GO:0031930: mitochondria-nucleus signaling pathway	3.03E-03
35	GO:0006694: steroid biosynthetic process	3.03E-03
36	GO:0048509: regulation of meristem development	3.03E-03
37	GO:0010050: vegetative phase change	3.58E-03
38	GO:0000105: histidine biosynthetic process	4.15E-03
39	GO:0009819: drought recovery	4.15E-03
40	GO:0006402: mRNA catabolic process	4.15E-03
41	GO:0010439: regulation of glucosinolate biosynthetic process	4.15E-03
42	GO:0009850: auxin metabolic process	4.15E-03
43	GO:0009690: cytokinin metabolic process	4.15E-03
44	GO:2000070: regulation of response to water deprivation	4.15E-03
45	GO:0040008: regulation of growth	4.41E-03
46	GO:0007186: G-protein coupled receptor signaling pathway	4.74E-03
47	GO:0009657: plastid organization	4.74E-03
48	GO:0032544: plastid translation	4.74E-03
49	GO:0000160: phosphorelay signal transduction system	4.80E-03
50	GO:0048507: meristem development	5.37E-03
51	GO:0000373: Group II intron splicing	5.37E-03
52	GO:0009056: catabolic process	5.37E-03
53	GO:0009867: jasmonic acid mediated signaling pathway	5.79E-03
54	GO:0010018: far-red light signaling pathway	6.03E-03
55	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.71E-03
56	GO:0009682: induced systemic resistance	7.43E-03
57	GO:0042546: cell wall biogenesis	7.77E-03
58	GO:0006790: sulfur compound metabolic process	8.17E-03
59	GO:0010105: negative regulation of ethylene-activated signaling pathway	8.17E-03
60	GO:0009636: response to toxic substance	8.39E-03
61	GO:0010102: lateral root morphogenesis	8.93E-03
62	GO:2000028: regulation of photoperiodism, flowering	8.93E-03
63	GO:0010229: inflorescence development	8.93E-03
64	GO:0010540: basipetal auxin transport	9.72E-03
65	GO:0048467: gynoecium development	9.72E-03
66	GO:0010020: chloroplast fission	9.72E-03
67	GO:0009736: cytokinin-activated signaling pathway	1.01E-02
68	GO:0046854: phosphatidylinositol phosphorylation	1.05E-02
69	GO:0042753: positive regulation of circadian rhythm	1.14E-02
70	GO:0006863: purine nucleobase transport	1.14E-02
71	GO:0030150: protein import into mitochondrial matrix	1.22E-02
72	GO:0010431: seed maturation	1.40E-02
73	GO:0016114: terpenoid biosynthetic process	1.40E-02
74	GO:0016226: iron-sulfur cluster assembly	1.50E-02
75	GO:0009693: ethylene biosynthetic process	1.59E-02
76	GO:0009625: response to insect	1.59E-02
77	GO:0070417: cellular response to cold	1.79E-02
78	GO:0010087: phloem or xylem histogenesis	1.89E-02
79	GO:0006520: cellular amino acid metabolic process	1.99E-02
80	GO:0010182: sugar mediated signaling pathway	1.99E-02
81	GO:0048544: recognition of pollen	2.10E-02
82	GO:0048825: cotyledon development	2.20E-02
83	GO:0016132: brassinosteroid biosynthetic process	2.31E-02
84	GO:0071554: cell wall organization or biogenesis	2.31E-02
85	GO:0032502: developmental process	2.42E-02
86	GO:0007264: small GTPase mediated signal transduction	2.42E-02
87	GO:0010583: response to cyclopentenone	2.42E-02
88	GO:0016125: sterol metabolic process	2.65E-02
89	GO:0009734: auxin-activated signaling pathway	2.71E-02
90	GO:0009739: response to gibberellin	2.79E-02
91	GO:0051607: defense response to virus	2.89E-02
92	GO:0009911: positive regulation of flower development	3.01E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.13E-02
94	GO:0010029: regulation of seed germination	3.13E-02
95	GO:0009627: systemic acquired resistance	3.25E-02
96	GO:0009733: response to auxin	3.33E-02
97	GO:0010411: xyloglucan metabolic process	3.38E-02
98	GO:0048573: photoperiodism, flowering	3.38E-02
99	GO:0009817: defense response to fungus, incompatible interaction	3.63E-02
100	GO:0007568: aging	4.03E-02
101	GO:0048527: lateral root development	4.03E-02
102	GO:0006865: amino acid transport	4.16E-02
103	GO:0045893: positive regulation of transcription, DNA-templated	4.27E-02
104	GO:0006631: fatty acid metabolic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0004401: histidinol-phosphatase activity	0.00E+00
3	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.34E-04
4	GO:0010012: steroid 22-alpha hydroxylase activity	2.34E-04
5	GO:0005227: calcium activated cation channel activity	2.34E-04
6	GO:0008395: steroid hydroxylase activity	2.34E-04
7	GO:0004805: trehalose-phosphatase activity	4.36E-04
8	GO:0045543: gibberellin 2-beta-dioxygenase activity	5.20E-04
9	GO:0010296: prenylcysteine methylesterase activity	5.20E-04
10	GO:0004047: aminomethyltransferase activity	5.20E-04
11	GO:0052832: inositol monophosphate 3-phosphatase activity	5.20E-04
12	GO:0008805: carbon-monoxide oxygenase activity	5.20E-04
13	GO:0008934: inositol monophosphate 1-phosphatase activity	5.20E-04
14	GO:0052833: inositol monophosphate 4-phosphatase activity	5.20E-04
15	GO:0050736: O-malonyltransferase activity	5.20E-04
16	GO:0009884: cytokinin receptor activity	5.20E-04
17	GO:0016707: gibberellin 3-beta-dioxygenase activity	8.44E-04
18	GO:0045548: phenylalanine ammonia-lyase activity	8.44E-04
19	GO:0005034: osmosensor activity	8.44E-04
20	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	1.20E-03
21	GO:0080031: methyl salicylate esterase activity	1.20E-03
22	GO:0046527: glucosyltransferase activity	1.61E-03
23	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.05E-03
24	GO:0080030: methyl indole-3-acetate esterase activity	2.52E-03
25	GO:0004709: MAP kinase kinase kinase activity	2.52E-03
26	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	2.52E-03
27	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	2.52E-03
28	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.03E-03
29	GO:0016832: aldehyde-lyase activity	3.03E-03
30	GO:0019900: kinase binding	3.03E-03
31	GO:0004871: signal transducer activity	3.20E-03
32	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.21E-03
33	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.37E-03
34	GO:0004673: protein histidine kinase activity	6.71E-03
35	GO:0043621: protein self-association	8.08E-03
36	GO:0016788: hydrolase activity, acting on ester bonds	8.35E-03
37	GO:0000155: phosphorelay sensor kinase activity	8.93E-03
38	GO:0015266: protein channel activity	8.93E-03
39	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.14E-02
40	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.14E-02
41	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.14E-02
42	GO:0031418: L-ascorbic acid binding	1.22E-02
43	GO:0008134: transcription factor binding	1.22E-02
44	GO:0043424: protein histidine kinase binding	1.31E-02
45	GO:0005345: purine nucleobase transmembrane transporter activity	1.31E-02
46	GO:0010333: terpene synthase activity	1.40E-02
47	GO:0003964: RNA-directed DNA polymerase activity	1.40E-02
48	GO:0003924: GTPase activity	1.76E-02
49	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.99E-02
50	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.05E-02
51	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.31E-02
52	GO:0004518: nuclease activity	2.42E-02
53	GO:0000156: phosphorelay response regulator activity	2.54E-02
54	GO:0016759: cellulose synthase activity	2.65E-02
55	GO:0016413: O-acetyltransferase activity	2.89E-02
56	GO:0042802: identical protein binding	3.16E-02
57	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.38E-02
58	GO:0008236: serine-type peptidase activity	3.50E-02
59	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.63E-02
60	GO:0005096: GTPase activator activity	3.76E-02
61	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.03E-02
62	GO:0003993: acid phosphatase activity	4.43E-02
63	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0005634: nucleus	2.65E-03
3	GO:0031305: integral component of mitochondrial inner membrane	4.15E-03
4	GO:0030095: chloroplast photosystem II	9.72E-03
5	GO:0005875: microtubule associated complex	1.14E-02
6	GO:0009654: photosystem II oxygen evolving complex	1.31E-02
7	GO:0012505: endomembrane system	1.40E-02
8	GO:0009532: plastid stroma	1.40E-02
9	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.69E-02
10	GO:0005770: late endosome	1.99E-02
11	GO:0019898: extrinsic component of membrane	2.20E-02
12	GO:0009504: cell plate	2.20E-02
13	GO:0030529: intracellular ribonucleoprotein complex	3.01E-02
14	GO:0009707: chloroplast outer membrane	3.63E-02
15	GO:0000151: ubiquitin ligase complex	3.63E-02
16	GO:0031977: thylakoid lumen	4.85E-02