Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G02900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070455: positive regulation of heme biosynthetic process0.00E+00
2GO:0006907: pinocytosis0.00E+00
3GO:0045014: negative regulation of transcription by glucose0.00E+00
4GO:0010070: zygote asymmetric cell division9.14E-05
5GO:0051013: microtubule severing9.14E-05
6GO:0010726: positive regulation of hydrogen peroxide metabolic process9.14E-05
7GO:0009887: animal organ morphogenesis2.02E-04
8GO:0010069: zygote asymmetric cytokinesis in embryo sac2.16E-04
9GO:0061062: regulation of nematode larval development2.16E-04
10GO:0009825: multidimensional cell growth2.28E-04
11GO:0009416: response to light stimulus2.40E-04
12GO:0006518: peptide metabolic process3.61E-04
13GO:0048575: short-day photoperiodism, flowering3.61E-04
14GO:0034090: maintenance of meiotic sister chromatid cohesion3.61E-04
15GO:0009686: gibberellin biosynthetic process4.15E-04
16GO:0042127: regulation of cell proliferation4.50E-04
17GO:0033014: tetrapyrrole biosynthetic process5.20E-04
18GO:0007276: gamete generation5.20E-04
19GO:0009956: radial pattern formation6.90E-04
20GO:0048629: trichome patterning6.90E-04
21GO:0010942: positive regulation of cell death1.07E-03
22GO:0015995: chlorophyll biosynthetic process1.15E-03
23GO:0000082: G1/S transition of mitotic cell cycle1.49E-03
24GO:0010444: guard mother cell differentiation1.49E-03
25GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.49E-03
26GO:0016567: protein ubiquitination1.66E-03
27GO:0010492: maintenance of shoot apical meristem identity1.72E-03
28GO:0009231: riboflavin biosynthetic process1.72E-03
29GO:0007186: G-protein coupled receptor signaling pathway1.96E-03
30GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.13E-03
31GO:0006783: heme biosynthetic process2.21E-03
32GO:0048589: developmental growth2.21E-03
33GO:0006782: protoporphyrinogen IX biosynthetic process2.75E-03
34GO:0008285: negative regulation of cell proliferation3.03E-03
35GO:0010152: pollen maturation3.32E-03
36GO:0009767: photosynthetic electron transport chain3.63E-03
37GO:0009740: gibberellic acid mediated signaling pathway3.67E-03
38GO:0009933: meristem structural organization3.93E-03
39GO:0010540: basipetal auxin transport3.93E-03
40GO:0006302: double-strand break repair3.93E-03
41GO:0048768: root hair cell tip growth3.93E-03
42GO:0006863: purine nucleobase transport4.58E-03
43GO:0043622: cortical microtubule organization5.27E-03
44GO:0006874: cellular calcium ion homeostasis5.27E-03
45GO:0051321: meiotic cell cycle5.62E-03
46GO:0010091: trichome branching6.73E-03
47GO:0048443: stamen development6.73E-03
48GO:0000271: polysaccharide biosynthetic process7.51E-03
49GO:0000226: microtubule cytoskeleton organization7.51E-03
50GO:0051301: cell division7.69E-03
51GO:0010305: leaf vascular tissue pattern formation7.91E-03
52GO:0009958: positive gravitropism7.91E-03
53GO:0009741: response to brassinosteroid7.91E-03
54GO:0045489: pectin biosynthetic process7.91E-03
55GO:0009791: post-embryonic development8.74E-03
56GO:0002229: defense response to oomycetes9.16E-03
57GO:0010583: response to cyclopentenone9.60E-03
58GO:0006468: protein phosphorylation1.04E-02
59GO:0009567: double fertilization forming a zygote and endosperm1.05E-02
60GO:0019760: glucosinolate metabolic process1.05E-02
61GO:0000910: cytokinesis1.14E-02
62GO:0016126: sterol biosynthetic process1.19E-02
63GO:0048366: leaf development1.22E-02
64GO:0010411: xyloglucan metabolic process1.33E-02
65GO:0009832: plant-type cell wall biogenesis1.48E-02
66GO:0016310: phosphorylation1.51E-02
67GO:0006811: ion transport1.54E-02
68GO:0009867: jasmonic acid mediated signaling pathway1.69E-02
69GO:0016051: carbohydrate biosynthetic process1.69E-02
70GO:0030154: cell differentiation1.88E-02
71GO:0009926: auxin polar transport2.03E-02
72GO:0009744: response to sucrose2.03E-02
73GO:0042546: cell wall biogenesis2.09E-02
74GO:0009965: leaf morphogenesis2.20E-02
75GO:0006351: transcription, DNA-templated2.31E-02
76GO:0009664: plant-type cell wall organization2.38E-02
77GO:0048316: seed development2.89E-02
78GO:0009908: flower development3.06E-02
79GO:0009735: response to cytokinin3.09E-02
80GO:0009624: response to nematode3.22E-02
81GO:0051726: regulation of cell cycle3.36E-02
82GO:0007275: multicellular organism development3.93E-02
83GO:0007165: signal transduction4.21E-02
84GO:0007623: circadian rhythm4.75E-02
85GO:0010228: vegetative to reproductive phase transition of meristem4.91E-02
RankGO TermAdjusted P value
1GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
2GO:0009899: ent-kaurene synthase activity0.00E+00
3GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity0.00E+00
4GO:0008568: microtubule-severing ATPase activity9.14E-05
5GO:0017022: myosin binding2.16E-04
6GO:0004109: coproporphyrinogen oxidase activity2.16E-04
7GO:0008805: carbon-monoxide oxygenase activity2.16E-04
8GO:0045544: gibberellin 20-oxidase activity5.20E-04
9GO:0043495: protein anchor6.90E-04
10GO:0004930: G-protein coupled receptor activity6.90E-04
11GO:0010011: auxin binding6.90E-04
12GO:0004871: signal transducer activity2.71E-03
13GO:0005217: intracellular ligand-gated ion channel activity4.26E-03
14GO:0004970: ionotropic glutamate receptor activity4.26E-03
15GO:0004674: protein serine/threonine kinase activity4.30E-03
16GO:0005345: purine nucleobase transmembrane transporter activity5.27E-03
17GO:0008408: 3'-5' exonuclease activity5.62E-03
18GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.98E-03
19GO:0046983: protein dimerization activity6.03E-03
20GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity7.91E-03
21GO:0001085: RNA polymerase II transcription factor binding7.91E-03
22GO:0010181: FMN binding8.32E-03
23GO:0016853: isomerase activity8.32E-03
24GO:0016762: xyloglucan:xyloglucosyl transferase activity9.16E-03
25GO:0016798: hydrolase activity, acting on glycosyl bonds1.33E-02
26GO:0005096: GTPase activator activity1.48E-02
27GO:0004222: metalloendopeptidase activity1.54E-02
28GO:0030145: manganese ion binding1.59E-02
29GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.59E-02
30GO:0016301: kinase activity1.80E-02
31GO:0003690: double-stranded DNA binding2.57E-02
32GO:0016758: transferase activity, transferring hexosyl groups3.71E-02
33GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding4.15E-02
34GO:0030246: carbohydrate binding4.53E-02
35GO:0008017: microtubule binding4.91E-02
RankGO TermAdjusted P value
1GO:0009349: riboflavin synthase complex0.00E+00
2GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
3GO:0000791: euchromatin9.14E-05
4GO:0030870: Mre11 complex2.16E-04
5GO:0009531: secondary cell wall5.20E-04
6GO:0000795: synaptonemal complex8.73E-04
7GO:0043234: protein complex4.58E-03
8GO:0005875: microtubule associated complex4.58E-03
9GO:0016592: mediator complex9.60E-03
10GO:0000785: chromatin9.60E-03
11GO:0005874: microtubule1.24E-02
12GO:0005667: transcription factor complex1.28E-02
13GO:0090406: pollen tube2.03E-02
14GO:0009570: chloroplast stroma2.26E-02
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Gene type



Gene DE type