co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02482

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080127: fruit septum development	0.00E+00
2	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
3	GO:0034757: negative regulation of iron ion transport	7.07E-05
4	GO:0010271: regulation of chlorophyll catabolic process	1.70E-04
5	GO:0030029: actin filament-based process	2.86E-04
6	GO:0080117: secondary growth	2.86E-04
7	GO:2000904: regulation of starch metabolic process	4.15E-04
8	GO:0010239: chloroplast mRNA processing	4.15E-04
9	GO:0044211: CTP salvage	4.15E-04
10	GO:0006021: inositol biosynthetic process	5.53E-04
11	GO:0009755: hormone-mediated signaling pathway	5.53E-04
12	GO:0044206: UMP salvage	5.53E-04
13	GO:0009451: RNA modification	6.09E-04
14	GO:0010438: cellular response to sulfur starvation	7.00E-04
15	GO:0009696: salicylic acid metabolic process	7.00E-04
16	GO:0016554: cytidine to uridine editing	8.57E-04
17	GO:0006206: pyrimidine nucleobase metabolic process	8.57E-04
18	GO:0048831: regulation of shoot system development	8.57E-04
19	GO:0003006: developmental process involved in reproduction	8.57E-04
20	GO:0000160: phosphorelay signal transduction system	9.62E-04
21	GO:0048509: regulation of meristem development	1.02E-03
22	GO:0031930: mitochondria-nucleus signaling pathway	1.02E-03
23	GO:0010098: suspensor development	1.19E-03
24	GO:2000070: regulation of response to water deprivation	1.37E-03
25	GO:0000105: histidine biosynthetic process	1.37E-03
26	GO:0009819: drought recovery	1.37E-03
27	GO:0010439: regulation of glucosinolate biosynthetic process	1.37E-03
28	GO:0032544: plastid translation	1.56E-03
29	GO:0071482: cellular response to light stimulus	1.56E-03
30	GO:0009636: response to toxic substance	1.64E-03
31	GO:0048507: meristem development	1.76E-03
32	GO:0009736: cytokinin-activated signaling pathway	1.96E-03
33	GO:0016573: histone acetylation	1.97E-03
34	GO:1900865: chloroplast RNA modification	1.97E-03
35	GO:0016571: histone methylation	1.97E-03
36	GO:0010192: mucilage biosynthetic process	2.19E-03
37	GO:0009682: induced systemic resistance	2.41E-03
38	GO:0043085: positive regulation of catalytic activity	2.41E-03
39	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.64E-03
40	GO:0006790: sulfur compound metabolic process	2.64E-03
41	GO:0010582: floral meristem determinacy	2.64E-03
42	GO:0009266: response to temperature stimulus	3.12E-03
43	GO:0048467: gynoecium development	3.12E-03
44	GO:0046854: phosphatidylinositol phosphorylation	3.37E-03
45	GO:0009833: plant-type primary cell wall biogenesis	3.63E-03
46	GO:0051017: actin filament bundle assembly	3.89E-03
47	GO:0006338: chromatin remodeling	3.89E-03
48	GO:0016226: iron-sulfur cluster assembly	4.73E-03
49	GO:0009625: response to insect	5.02E-03
50	GO:0071215: cellular response to abscisic acid stimulus	5.02E-03
51	GO:0016117: carotenoid biosynthetic process	5.62E-03
52	GO:0070417: cellular response to cold	5.62E-03
53	GO:0010087: phloem or xylem histogenesis	5.93E-03
54	GO:0006662: glycerol ether metabolic process	6.24E-03
55	GO:0010182: sugar mediated signaling pathway	6.24E-03
56	GO:0009958: positive gravitropism	6.24E-03
57	GO:0009658: chloroplast organization	7.36E-03
58	GO:0010583: response to cyclopentenone	7.56E-03
59	GO:0006970: response to osmotic stress	7.93E-03
60	GO:0010029: regulation of seed germination	9.71E-03
61	GO:0009627: systemic acquired resistance	1.01E-02
62	GO:0009414: response to water deprivation	1.06E-02
63	GO:0045454: cell redox homeostasis	1.09E-02
64	GO:0009817: defense response to fungus, incompatible interaction	1.13E-02
65	GO:0030244: cellulose biosynthetic process	1.13E-02
66	GO:0009832: plant-type cell wall biogenesis	1.17E-02
67	GO:0006499: N-terminal protein myristoylation	1.21E-02
68	GO:0009910: negative regulation of flower development	1.25E-02
69	GO:0009867: jasmonic acid mediated signaling pathway	1.33E-02
70	GO:0034599: cellular response to oxidative stress	1.37E-02
71	GO:0006631: fatty acid metabolic process	1.50E-02
72	GO:0008283: cell proliferation	1.59E-02
73	GO:0009644: response to high light intensity	1.68E-02
74	GO:0009965: leaf morphogenesis	1.73E-02
75	GO:0006364: rRNA processing	1.97E-02
76	GO:0009909: regulation of flower development	2.11E-02
77	GO:0016569: covalent chromatin modification	2.42E-02
78	GO:0009058: biosynthetic process	3.08E-02
79	GO:0009845: seed germination	3.14E-02
80	GO:0009793: embryo development ending in seed dormancy	3.14E-02
81	GO:0040008: regulation of growth	3.61E-02
82	GO:0009739: response to gibberellin	4.04E-02
83	GO:0009617: response to bacterium	4.23E-02
84	GO:0009651: response to salt stress	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
2	GO:0004401: histidinol-phosphatase activity	0.00E+00
3	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.07E-05
4	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.07E-05
5	GO:0004047: aminomethyltransferase activity	1.70E-04
6	GO:0052832: inositol monophosphate 3-phosphatase activity	1.70E-04
7	GO:0008934: inositol monophosphate 1-phosphatase activity	1.70E-04
8	GO:0052833: inositol monophosphate 4-phosphatase activity	1.70E-04
9	GO:0050736: O-malonyltransferase activity	1.70E-04
10	GO:0009884: cytokinin receptor activity	1.70E-04
11	GO:0005034: osmosensor activity	2.86E-04
12	GO:0004148: dihydrolipoyl dehydrogenase activity	2.86E-04
13	GO:0004519: endonuclease activity	3.77E-04
14	GO:0080031: methyl salicylate esterase activity	4.15E-04
15	GO:0004845: uracil phosphoribosyltransferase activity	5.53E-04
16	GO:0004523: RNA-DNA hybrid ribonuclease activity	7.00E-04
17	GO:0080030: methyl indole-3-acetate esterase activity	8.57E-04
18	GO:0004709: MAP kinase kinase kinase activity	8.57E-04
19	GO:0019900: kinase binding	1.02E-03
20	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.02E-03
21	GO:0016832: aldehyde-lyase activity	1.02E-03
22	GO:0004849: uridine kinase activity	1.02E-03
23	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.05E-03
24	GO:0050660: flavin adenine dinucleotide binding	1.21E-03
25	GO:0004673: protein histidine kinase activity	2.19E-03
26	GO:0008047: enzyme activator activity	2.19E-03
27	GO:0000155: phosphorelay sensor kinase activity	2.88E-03
28	GO:0009982: pseudouridine synthase activity	2.88E-03
29	GO:0043424: protein histidine kinase binding	4.17E-03
30	GO:0003964: RNA-directed DNA polymerase activity	4.44E-03
31	GO:0016760: cellulose synthase (UDP-forming) activity	5.02E-03
32	GO:0003723: RNA binding	5.34E-03
33	GO:0047134: protein-disulfide reductase activity	5.62E-03
34	GO:0042802: identical protein binding	6.05E-03
35	GO:0004791: thioredoxin-disulfide reductase activity	6.56E-03
36	GO:0004518: nuclease activity	7.56E-03
37	GO:0000156: phosphorelay response regulator activity	7.90E-03
38	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	7.90E-03
39	GO:0051015: actin filament binding	7.90E-03
40	GO:0016759: cellulose synthase activity	8.25E-03
41	GO:0005200: structural constituent of cytoskeleton	8.61E-03
42	GO:0004721: phosphoprotein phosphatase activity	1.05E-02
43	GO:0050897: cobalt ion binding	1.25E-02
44	GO:0003697: single-stranded DNA binding	1.33E-02
45	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.41E-02
46	GO:0004364: glutathione transferase activity	1.55E-02
47	GO:0043621: protein self-association	1.68E-02
48	GO:0003690: double-stranded DNA binding	2.01E-02
49	GO:0031625: ubiquitin protein ligase binding	2.11E-02
50	GO:0016874: ligase activity	2.42E-02
51	GO:0015035: protein disulfide oxidoreductase activity	2.58E-02
52	GO:0008026: ATP-dependent helicase activity	2.63E-02
53	GO:0016740: transferase activity	2.93E-02
54	GO:0019843: rRNA binding	2.96E-02
55	GO:0005525: GTP binding	3.94E-02
56	GO:0008270: zinc ion binding	4.94E-02
57	GO:0008168: methyltransferase activity	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0009513: etioplast	1.70E-04
3	GO:0009509: chromoplast	2.86E-04
4	GO:0009507: chloroplast	8.91E-04
5	GO:0009501: amyloplast	1.37E-03
6	GO:0015629: actin cytoskeleton	5.02E-03
7	GO:0031965: nuclear membrane	6.89E-03
8	GO:0009707: chloroplast outer membrane	1.13E-02
9	GO:0000151: ubiquitin ligase complex	1.13E-02
10	GO:0005856: cytoskeleton	1.73E-02
11	GO:0005747: mitochondrial respiratory chain complex I	2.26E-02
12	GO:0010287: plastoglobule	2.85E-02
13	GO:0005759: mitochondrial matrix	3.49E-02