co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G01883

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030388: fructose 1,6-bisphosphate metabolic process	1.17E-07
2	GO:0006000: fructose metabolic process	4.55E-07
3	GO:0006002: fructose 6-phosphate metabolic process	1.95E-05
4	GO:0005983: starch catabolic process	5.14E-05
5	GO:0006094: gluconeogenesis	5.98E-05
6	GO:0005986: sucrose biosynthetic process	5.98E-05
7	GO:1900033: negative regulation of trichome patterning	1.07E-04
8	GO:0010353: response to trehalose	1.07E-04
9	GO:0015804: neutral amino acid transport	1.07E-04
10	GO:0031537: regulation of anthocyanin metabolic process	1.07E-04
11	GO:0050793: regulation of developmental process	1.07E-04
12	GO:0010021: amylopectin biosynthetic process	3.64E-04
13	GO:0071368: cellular response to cytokinin stimulus	4.63E-04
14	GO:0080113: regulation of seed growth	6.76E-04
15	GO:0080036: regulation of cytokinin-activated signaling pathway	6.76E-04
16	GO:0015979: photosynthesis	7.03E-04
17	GO:0009610: response to symbiotic fungus	7.90E-04
18	GO:0030091: protein repair	9.08E-04
19	GO:0010380: regulation of chlorophyll biosynthetic process	1.29E-03
20	GO:0042761: very long-chain fatty acid biosynthetic process	1.29E-03
21	GO:0009750: response to fructose	1.57E-03
22	GO:2000652: regulation of secondary cell wall biogenesis	1.57E-03
23	GO:0009773: photosynthetic electron transport in photosystem I	1.57E-03
24	GO:0009735: response to cytokinin	1.76E-03
25	GO:0018107: peptidyl-threonine phosphorylation	1.87E-03
26	GO:0019253: reductive pentose-phosphate cycle	2.03E-03
27	GO:0005985: sucrose metabolic process	2.19E-03
28	GO:0006636: unsaturated fatty acid biosynthetic process	2.36E-03
29	GO:0080147: root hair cell development	2.52E-03
30	GO:0003333: amino acid transmembrane transport	2.88E-03
31	GO:0061077: chaperone-mediated protein folding	2.88E-03
32	GO:0019748: secondary metabolic process	3.06E-03
33	GO:0010082: regulation of root meristem growth	3.24E-03
34	GO:0080022: primary root development	3.82E-03
35	GO:0019252: starch biosynthetic process	4.43E-03
36	GO:0009723: response to ethylene	4.49E-03
37	GO:0006979: response to oxidative stress	4.84E-03
38	GO:0015995: chlorophyll biosynthetic process	6.69E-03
39	GO:0032259: methylation	6.78E-03
40	GO:0016311: dephosphorylation	6.94E-03
41	GO:0009817: defense response to fungus, incompatible interaction	7.19E-03
42	GO:0055114: oxidation-reduction process	7.39E-03
43	GO:0000160: phosphorelay signal transduction system	7.43E-03
44	GO:0007568: aging	7.95E-03
45	GO:0009631: cold acclimation	7.95E-03
46	GO:0006865: amino acid transport	8.21E-03
47	GO:0006357: regulation of transcription from RNA polymerase II promoter	9.37E-03
48	GO:0051707: response to other organism	1.01E-02
49	GO:0006812: cation transport	1.19E-02
50	GO:0009736: cytokinin-activated signaling pathway	1.25E-02
51	GO:0048367: shoot system development	1.44E-02
52	GO:0018105: peptidyl-serine phosphorylation	1.64E-02
53	GO:0009414: response to water deprivation	2.50E-02
54	GO:0009739: response to gibberellin	2.56E-02
55	GO:0008380: RNA splicing	2.68E-02
56	GO:0009409: response to cold	3.46E-02
57	GO:0006810: transport	3.75E-02
58	GO:0045454: cell redox homeostasis	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
2	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
3	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	1.17E-07
4	GO:0004033: aldo-keto reductase (NADP) activity	1.51E-05
5	GO:0050521: alpha-glucan, water dikinase activity	4.31E-05
6	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	4.31E-05
7	GO:0015172: acidic amino acid transmembrane transporter activity	1.07E-04
8	GO:0016868: intramolecular transferase activity, phosphotransferases	1.07E-04
9	GO:0033201: alpha-1,4-glucan synthase activity	1.07E-04
10	GO:0018708: thiol S-methyltransferase activity	1.07E-04
11	GO:0004324: ferredoxin-NADP+ reductase activity	1.84E-04
12	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.84E-04
13	GO:0004373: glycogen (starch) synthase activity	1.84E-04
14	GO:0019201: nucleotide kinase activity	2.70E-04
15	GO:0015175: neutral amino acid transmembrane transporter activity	2.70E-04
16	GO:0004045: aminoacyl-tRNA hydrolase activity	3.64E-04
17	GO:0009011: starch synthase activity	3.64E-04
18	GO:0003959: NADPH dehydrogenase activity	4.63E-04
19	GO:0008200: ion channel inhibitor activity	5.67E-04
20	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	6.76E-04
21	GO:0004017: adenylate kinase activity	6.76E-04
22	GO:0004602: glutathione peroxidase activity	6.76E-04
23	GO:0051537: 2 iron, 2 sulfur cluster binding	8.59E-04
24	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.03E-03
25	GO:0016491: oxidoreductase activity	1.30E-03
26	GO:0044183: protein binding involved in protein folding	1.57E-03
27	GO:0015386: potassium:proton antiporter activity	1.57E-03
28	GO:0008266: poly(U) RNA binding	2.03E-03
29	GO:0005528: FK506 binding	2.52E-03
30	GO:0015079: potassium ion transmembrane transporter activity	2.70E-03
31	GO:0008168: methyltransferase activity	3.74E-03
32	GO:0048038: quinone binding	4.64E-03
33	GO:0044212: transcription regulatory region DNA binding	4.79E-03
34	GO:0000156: phosphorelay response regulator activity	5.07E-03
35	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	5.75E-03
36	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	6.39E-03
37	GO:0004185: serine-type carboxypeptidase activity	1.01E-02
38	GO:0015293: symporter activity	1.10E-02
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.13E-02
40	GO:0016787: hydrolase activity	1.26E-02
41	GO:0015171: amino acid transmembrane transporter activity	1.34E-02
42	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.44E-02
43	GO:0015035: protein disulfide oxidoreductase activity	1.64E-02
44	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.91E-02
45	GO:0015297: antiporter activity	2.29E-02
46	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.80E-02
47	GO:0043565: sequence-specific DNA binding	3.76E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	7.76E-11
2	GO:0009535: chloroplast thylakoid membrane	3.94E-09
3	GO:0009570: chloroplast stroma	5.19E-08
4	GO:0009941: chloroplast envelope	1.30E-07
5	GO:0009534: chloroplast thylakoid	1.45E-07
6	GO:0010287: plastoglobule	1.53E-04
7	GO:0009501: amyloplast	9.08E-04
8	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.16E-03
9	GO:0005875: microtubule associated complex	2.36E-03
10	GO:0042651: thylakoid membrane	2.70E-03
11	GO:0031969: chloroplast membrane	4.80E-03
12	GO:0010319: stromule	5.52E-03
13	GO:0030529: intracellular ribonucleoprotein complex	5.98E-03
14	GO:0009579: thylakoid	1.51E-02
15	GO:0009706: chloroplast inner membrane	1.60E-02
16	GO:0009543: chloroplast thylakoid lumen	1.88E-02