Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01870

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
6GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002764: immune response-regulating signaling pathway0.00E+00
9GO:0033587: shikimate biosynthetic process0.00E+00
10GO:0045730: respiratory burst0.00E+00
11GO:0010200: response to chitin5.04E-08
12GO:0006468: protein phosphorylation1.38E-07
13GO:0042742: defense response to bacterium6.81E-07
14GO:0031348: negative regulation of defense response1.36E-06
15GO:0060548: negative regulation of cell death1.63E-06
16GO:0080142: regulation of salicylic acid biosynthetic process1.63E-06
17GO:0009697: salicylic acid biosynthetic process3.62E-06
18GO:0019725: cellular homeostasis1.08E-05
19GO:0006952: defense response1.14E-05
20GO:0045227: capsule polysaccharide biosynthetic process1.36E-04
21GO:0033358: UDP-L-arabinose biosynthetic process1.36E-04
22GO:0009611: response to wounding1.53E-04
23GO:0010225: response to UV-C2.09E-04
24GO:0070588: calcium ion transmembrane transport2.31E-04
25GO:0009626: plant-type hypersensitive response3.11E-04
26GO:0009617: response to bacterium3.20E-04
27GO:0009737: response to abscisic acid4.18E-04
28GO:0010365: positive regulation of ethylene biosynthetic process4.95E-04
29GO:0051938: L-glutamate import4.95E-04
30GO:0046256: 2,4,6-trinitrotoluene catabolic process4.95E-04
31GO:0051245: negative regulation of cellular defense response4.95E-04
32GO:0019567: arabinose biosynthetic process4.95E-04
33GO:0015969: guanosine tetraphosphate metabolic process4.95E-04
34GO:0051180: vitamin transport4.95E-04
35GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.95E-04
36GO:0010941: regulation of cell death4.95E-04
37GO:0010421: hydrogen peroxide-mediated programmed cell death4.95E-04
38GO:0030974: thiamine pyrophosphate transport4.95E-04
39GO:1901183: positive regulation of camalexin biosynthetic process4.95E-04
40GO:0009270: response to humidity4.95E-04
41GO:0032491: detection of molecule of fungal origin4.95E-04
42GO:0019673: GDP-mannose metabolic process4.95E-04
43GO:0042759: long-chain fatty acid biosynthetic process4.95E-04
44GO:0009787: regulation of abscisic acid-activated signaling pathway6.32E-04
45GO:2000031: regulation of salicylic acid mediated signaling pathway7.70E-04
46GO:0009409: response to cold8.11E-04
47GO:0090333: regulation of stomatal closure9.21E-04
48GO:0046777: protein autophosphorylation9.69E-04
49GO:0007165: signal transduction1.03E-03
50GO:0010150: leaf senescence1.04E-03
51GO:0043091: L-arginine import1.07E-03
52GO:0046939: nucleotide phosphorylation1.07E-03
53GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.07E-03
54GO:0015802: basic amino acid transport1.07E-03
55GO:0010618: aerenchyma formation1.07E-03
56GO:0010115: regulation of abscisic acid biosynthetic process1.07E-03
57GO:0015865: purine nucleotide transport1.07E-03
58GO:0010271: regulation of chlorophyll catabolic process1.07E-03
59GO:0010541: acropetal auxin transport1.07E-03
60GO:0031349: positive regulation of defense response1.07E-03
61GO:0015893: drug transport1.07E-03
62GO:0002221: pattern recognition receptor signaling pathway1.07E-03
63GO:1900426: positive regulation of defense response to bacterium1.08E-03
64GO:0006486: protein glycosylation1.15E-03
65GO:0043069: negative regulation of programmed cell death1.26E-03
66GO:0006470: protein dephosphorylation1.32E-03
67GO:0009620: response to fungus1.72E-03
68GO:0010186: positive regulation of cellular defense response1.74E-03
69GO:0048281: inflorescence morphogenesis1.74E-03
70GO:0010498: proteasomal protein catabolic process1.74E-03
71GO:0016045: detection of bacterium1.74E-03
72GO:0034051: negative regulation of plant-type hypersensitive response1.74E-03
73GO:1900140: regulation of seedling development1.74E-03
74GO:0010359: regulation of anion channel activity1.74E-03
75GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.74E-03
76GO:0051176: positive regulation of sulfur metabolic process1.74E-03
77GO:0045793: positive regulation of cell size1.74E-03
78GO:0009751: response to salicylic acid1.78E-03
79GO:0055046: microgametogenesis1.90E-03
80GO:0009266: response to temperature stimulus2.14E-03
81GO:0034605: cellular response to heat2.14E-03
82GO:0002237: response to molecule of bacterial origin2.14E-03
83GO:0009742: brassinosteroid mediated signaling pathway2.17E-03
84GO:0009225: nucleotide-sugar metabolic process2.40E-03
85GO:0010167: response to nitrate2.40E-03
86GO:0046836: glycolipid transport2.52E-03
87GO:0000187: activation of MAPK activity2.52E-03
88GO:0048194: Golgi vesicle budding2.52E-03
89GO:0046902: regulation of mitochondrial membrane permeability2.52E-03
90GO:0010306: rhamnogalacturonan II biosynthetic process2.52E-03
91GO:0006612: protein targeting to membrane2.52E-03
92GO:0072583: clathrin-dependent endocytosis2.52E-03
93GO:0071323: cellular response to chitin2.52E-03
94GO:0002679: respiratory burst involved in defense response2.52E-03
95GO:0046513: ceramide biosynthetic process2.52E-03
96GO:0050832: defense response to fungus2.93E-03
97GO:0009867: jasmonic acid mediated signaling pathway3.02E-03
98GO:0046345: abscisic acid catabolic process3.40E-03
99GO:0010483: pollen tube reception3.40E-03
100GO:0045088: regulation of innate immune response3.40E-03
101GO:0010107: potassium ion import3.40E-03
102GO:0010363: regulation of plant-type hypersensitive response3.40E-03
103GO:0071219: cellular response to molecule of bacterial origin3.40E-03
104GO:0010508: positive regulation of autophagy3.40E-03
105GO:0006887: exocytosis3.77E-03
106GO:0010017: red or far-red light signaling pathway3.96E-03
107GO:0016226: iron-sulfur cluster assembly3.96E-03
108GO:0009625: response to insect4.32E-03
109GO:0006012: galactose metabolic process4.32E-03
110GO:0018344: protein geranylgeranylation4.36E-03
111GO:0032957: inositol trisphosphate metabolic process4.36E-03
112GO:0010942: positive regulation of cell death5.40E-03
113GO:0010405: arabinogalactan protein metabolic process5.40E-03
114GO:1900425: negative regulation of defense response to bacterium5.40E-03
115GO:0010337: regulation of salicylic acid metabolic process5.40E-03
116GO:0018258: protein O-linked glycosylation via hydroxyproline5.40E-03
117GO:0046855: inositol phosphate dephosphorylation5.40E-03
118GO:0002238: response to molecule of fungal origin5.40E-03
119GO:0010118: stomatal movement5.51E-03
120GO:0007166: cell surface receptor signaling pathway5.61E-03
121GO:0009809: lignin biosynthetic process6.12E-03
122GO:2000037: regulation of stomatal complex patterning6.52E-03
123GO:0010310: regulation of hydrogen peroxide metabolic process6.52E-03
124GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response6.52E-03
125GO:0042372: phylloquinone biosynthetic process6.52E-03
126GO:0009423: chorismate biosynthetic process6.52E-03
127GO:0002229: defense response to oomycetes7.35E-03
128GO:0006891: intra-Golgi vesicle-mediated transport7.35E-03
129GO:0010161: red light signaling pathway7.71E-03
130GO:0098869: cellular oxidant detoxification7.71E-03
131GO:0071446: cellular response to salicylic acid stimulus7.71E-03
132GO:1900056: negative regulation of leaf senescence7.71E-03
133GO:0070370: cellular heat acclimation7.71E-03
134GO:0009414: response to water deprivation7.87E-03
135GO:0030091: protein repair8.97E-03
136GO:0045010: actin nucleation8.97E-03
137GO:0006904: vesicle docking involved in exocytosis9.48E-03
138GO:0006970: response to osmotic stress9.97E-03
139GO:0009808: lignin metabolic process1.03E-02
140GO:0010099: regulation of photomorphogenesis1.03E-02
141GO:0009932: cell tip growth1.03E-02
142GO:0010204: defense response signaling pathway, resistance gene-independent1.03E-02
143GO:0001666: response to hypoxia1.07E-02
144GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.13E-02
145GO:0009816: defense response to bacterium, incompatible interaction1.13E-02
146GO:0009051: pentose-phosphate shunt, oxidative branch1.17E-02
147GO:0051865: protein autoubiquitination1.17E-02
148GO:0006098: pentose-phosphate shunt1.17E-02
149GO:0046916: cellular transition metal ion homeostasis1.17E-02
150GO:0010112: regulation of systemic acquired resistance1.17E-02
151GO:0009627: systemic acquired resistance1.19E-02
152GO:0048354: mucilage biosynthetic process involved in seed coat development1.32E-02
153GO:0010380: regulation of chlorophyll biosynthetic process1.32E-02
154GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.32E-02
155GO:0008202: steroid metabolic process1.32E-02
156GO:0008219: cell death1.40E-02
157GO:0009817: defense response to fungus, incompatible interaction1.40E-02
158GO:0009845: seed germination1.42E-02
159GO:0007064: mitotic sister chromatid cohesion1.47E-02
160GO:0009970: cellular response to sulfate starvation1.47E-02
161GO:0006535: cysteine biosynthetic process from serine1.47E-02
162GO:0009832: plant-type cell wall biogenesis1.47E-02
163GO:0048527: lateral root development1.62E-02
164GO:0010119: regulation of stomatal movement1.62E-02
165GO:0046856: phosphatidylinositol dephosphorylation1.63E-02
166GO:0009073: aromatic amino acid family biosynthetic process1.63E-02
167GO:0009738: abscisic acid-activated signaling pathway1.67E-02
168GO:0016567: protein ubiquitination1.72E-02
169GO:0045087: innate immune response1.77E-02
170GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.80E-02
171GO:0008361: regulation of cell size1.80E-02
172GO:0012501: programmed cell death1.80E-02
173GO:0015706: nitrate transport1.80E-02
174GO:0002213: defense response to insect1.80E-02
175GO:0010105: negative regulation of ethylene-activated signaling pathway1.80E-02
176GO:0035556: intracellular signal transduction1.94E-02
177GO:0010229: inflorescence development1.97E-02
178GO:0009785: blue light signaling pathway1.97E-02
179GO:0006006: glucose metabolic process1.97E-02
180GO:0010540: basipetal auxin transport2.14E-02
181GO:0007034: vacuolar transport2.14E-02
182GO:0009408: response to heat2.22E-02
183GO:0006979: response to oxidative stress2.27E-02
184GO:0051707: response to other organism2.29E-02
185GO:0046854: phosphatidylinositol phosphorylation2.33E-02
186GO:0009969: xyloglucan biosynthetic process2.33E-02
187GO:0090351: seedling development2.33E-02
188GO:0006855: drug transmembrane transport2.68E-02
189GO:0019344: cysteine biosynthetic process2.71E-02
190GO:0009863: salicylic acid mediated signaling pathway2.71E-02
191GO:0009695: jasmonic acid biosynthetic process2.90E-02
192GO:0048511: rhythmic process3.11E-02
193GO:0009269: response to desiccation3.11E-02
194GO:0048278: vesicle docking3.11E-02
195GO:0003333: amino acid transmembrane transport3.11E-02
196GO:0009873: ethylene-activated signaling pathway3.23E-02
197GO:0071456: cellular response to hypoxia3.31E-02
198GO:0009814: defense response, incompatible interaction3.31E-02
199GO:2000022: regulation of jasmonic acid mediated signaling pathway3.31E-02
200GO:0009909: regulation of flower development3.42E-02
201GO:0010227: floral organ abscission3.53E-02
202GO:0019722: calcium-mediated signaling3.74E-02
203GO:0009561: megagametogenesis3.74E-02
204GO:0042147: retrograde transport, endosome to Golgi3.96E-02
205GO:0042631: cellular response to water deprivation4.19E-02
206GO:0042391: regulation of membrane potential4.19E-02
207GO:0006885: regulation of pH4.42E-02
208GO:0061025: membrane fusion4.65E-02
209GO:0009651: response to salt stress4.65E-02
210GO:0009646: response to absence of light4.65E-02
211GO:0048544: recognition of pollen4.65E-02
212GO:0009749: response to glucose4.88E-02
213GO:0008654: phospholipid biosynthetic process4.88E-02
RankGO TermAdjusted P value
1GO:0004168: dolichol kinase activity0.00E+00
2GO:0005522: profilin binding0.00E+00
3GO:0070191: methionine-R-sulfoxide reductase activity0.00E+00
4GO:0004107: chorismate synthase activity0.00E+00
5GO:2001080: chitosan binding0.00E+00
6GO:0016301: kinase activity5.48E-08
7GO:0004674: protein serine/threonine kinase activity5.84E-08
8GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.62E-06
9GO:0005524: ATP binding4.72E-06
10GO:0050373: UDP-arabinose 4-epimerase activity1.36E-04
11GO:0019199: transmembrane receptor protein kinase activity1.36E-04
12GO:0005388: calcium-transporting ATPase activity1.64E-04
13GO:0004012: phospholipid-translocating ATPase activity3.95E-04
14GO:0003978: UDP-glucose 4-epimerase activity3.95E-04
15GO:0033612: receptor serine/threonine kinase binding4.03E-04
16GO:0031127: alpha-(1,2)-fucosyltransferase activity4.95E-04
17GO:0032050: clathrin heavy chain binding4.95E-04
18GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.95E-04
19GO:0090422: thiamine pyrophosphate transporter activity4.95E-04
20GO:0004662: CAAX-protein geranylgeranyltransferase activity4.95E-04
21GO:0015085: calcium ion transmembrane transporter activity4.95E-04
22GO:0008446: GDP-mannose 4,6-dehydratase activity4.95E-04
23GO:0008909: isochorismate synthase activity4.95E-04
24GO:0004714: transmembrane receptor protein tyrosine kinase activity6.32E-04
25GO:0043531: ADP binding6.64E-04
26GO:0019901: protein kinase binding9.15E-04
27GO:0005515: protein binding9.18E-04
28GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.21E-04
29GO:0004672: protein kinase activity1.01E-03
30GO:0050291: sphingosine N-acyltransferase activity1.07E-03
31GO:0047364: desulfoglucosinolate sulfotransferase activity1.07E-03
32GO:0022821: potassium ion antiporter activity1.07E-03
33GO:0001671: ATPase activator activity1.07E-03
34GO:0008728: GTP diphosphokinase activity1.07E-03
35GO:0048531: beta-1,3-galactosyltransferase activity1.07E-03
36GO:0008559: xenobiotic-transporting ATPase activity1.46E-03
37GO:0016595: glutamate binding1.74E-03
38GO:0046423: allene-oxide cyclase activity1.74E-03
39GO:0052659: inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity1.74E-03
40GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.90E-03
41GO:0004842: ubiquitin-protein transferase activity2.36E-03
42GO:0004190: aspartic-type endopeptidase activity2.40E-03
43GO:0052658: inositol-1,4,5-trisphosphate 5-phosphatase activity2.52E-03
44GO:0009001: serine O-acetyltransferase activity2.52E-03
45GO:0015189: L-lysine transmembrane transporter activity2.52E-03
46GO:0017089: glycolipid transporter activity2.52E-03
47GO:0019201: nucleotide kinase activity2.52E-03
48GO:0004445: inositol-polyphosphate 5-phosphatase activity2.52E-03
49GO:0015181: arginine transmembrane transporter activity2.52E-03
50GO:0043424: protein histidine kinase binding3.28E-03
51GO:0004345: glucose-6-phosphate dehydrogenase activity3.40E-03
52GO:0051861: glycolipid binding3.40E-03
53GO:0005313: L-glutamate transmembrane transporter activity3.40E-03
54GO:0005471: ATP:ADP antiporter activity4.36E-03
55GO:0045431: flavonol synthase activity4.36E-03
56GO:0010294: abscisic acid glucosyltransferase activity4.36E-03
57GO:0005525: GTP binding5.30E-03
58GO:0004722: protein serine/threonine phosphatase activity5.31E-03
59GO:0004605: phosphatidate cytidylyltransferase activity5.40E-03
60GO:1990714: hydroxyproline O-galactosyltransferase activity5.40E-03
61GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity5.40E-03
62GO:0035252: UDP-xylosyltransferase activity5.40E-03
63GO:0019900: kinase binding6.52E-03
64GO:0008113: peptide-methionine (S)-S-oxide reductase activity6.52E-03
65GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.52E-03
66GO:0004017: adenylate kinase activity6.52E-03
67GO:0005509: calcium ion binding6.96E-03
68GO:0008234: cysteine-type peptidase activity6.98E-03
69GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity7.71E-03
70GO:0043295: glutathione binding7.71E-03
71GO:0052747: sinapyl alcohol dehydrogenase activity8.97E-03
72GO:0005544: calcium-dependent phospholipid binding8.97E-03
73GO:0004708: MAP kinase kinase activity8.97E-03
74GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.48E-03
75GO:0008142: oxysterol binding1.03E-02
76GO:0008271: secondary active sulfate transmembrane transporter activity1.03E-02
77GO:0004430: 1-phosphatidylinositol 4-kinase activity1.03E-02
78GO:0008417: fucosyltransferase activity1.17E-02
79GO:0004721: phosphoprotein phosphatase activity1.26E-02
80GO:0004806: triglyceride lipase activity1.26E-02
81GO:0015112: nitrate transmembrane transporter activity1.32E-02
82GO:0015174: basic amino acid transmembrane transporter activity1.32E-02
83GO:0004568: chitinase activity1.47E-02
84GO:0008171: O-methyltransferase activity1.47E-02
85GO:0008047: enzyme activator activity1.47E-02
86GO:0004713: protein tyrosine kinase activity1.47E-02
87GO:0015238: drug transmembrane transporter activity1.47E-02
88GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.62E-02
89GO:0005543: phospholipid binding1.63E-02
90GO:0015116: sulfate transmembrane transporter activity1.80E-02
91GO:0008378: galactosyltransferase activity1.80E-02
92GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity1.80E-02
93GO:0045551: cinnamyl-alcohol dehydrogenase activity1.80E-02
94GO:0031072: heat shock protein binding1.97E-02
95GO:0003924: GTPase activity2.22E-02
96GO:0030552: cAMP binding2.33E-02
97GO:0030553: cGMP binding2.33E-02
98GO:0008061: chitin binding2.33E-02
99GO:0008146: sulfotransferase activity2.33E-02
100GO:0003954: NADH dehydrogenase activity2.71E-02
101GO:0043565: sequence-specific DNA binding2.87E-02
102GO:0051087: chaperone binding2.90E-02
103GO:0005216: ion channel activity2.90E-02
104GO:0019706: protein-cysteine S-palmitoyltransferase activity3.11E-02
105GO:0004707: MAP kinase activity3.11E-02
106GO:0016298: lipase activity3.20E-02
107GO:0046982: protein heterodimerization activity3.26E-02
108GO:0005516: calmodulin binding3.51E-02
109GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.77E-02
110GO:0005249: voltage-gated potassium channel activity4.19E-02
111GO:0030551: cyclic nucleotide binding4.19E-02
112GO:0005451: monovalent cation:proton antiporter activity4.19E-02
113GO:0015299: solute:proton antiporter activity4.65E-02
114GO:0010181: FMN binding4.65E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.93E-11
2GO:0016021: integral component of membrane3.32E-04
3GO:0005911: cell-cell junction4.95E-04
4GO:0005953: CAAX-protein geranylgeranyltransferase complex4.95E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane1.07E-03
6GO:0005901: caveola1.07E-03
7GO:0032580: Golgi cisterna membrane1.27E-03
8GO:0008287: protein serine/threonine phosphatase complex1.74E-03
9GO:0030139: endocytic vesicle1.74E-03
10GO:0070062: extracellular exosome2.52E-03
11GO:0000145: exocyst7.86E-03
12GO:0005887: integral component of plasma membrane1.11E-02
13GO:0005794: Golgi apparatus1.26E-02
14GO:0005740: mitochondrial envelope1.47E-02
15GO:0030125: clathrin vesicle coat1.47E-02
16GO:0000325: plant-type vacuole1.62E-02
17GO:0090404: pollen tube tip1.63E-02
18GO:0031012: extracellular matrix1.97E-02
19GO:0005795: Golgi stack2.33E-02
20GO:0030176: integral component of endoplasmic reticulum membrane2.33E-02
21GO:0043234: protein complex2.51E-02
22GO:0005758: mitochondrial intermembrane space2.71E-02
23GO:0010008: endosome membrane3.77E-02
24GO:0012505: endomembrane system4.26E-02
25GO:0005770: late endosome4.42E-02
26GO:0009504: cell plate4.88E-02
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Gene type



Gene DE type