Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043972: histone H3-K23 acetylation0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
4GO:0044154: histone H3-K14 acetylation0.00E+00
5GO:0010081: regulation of inflorescence meristem growth0.00E+00
6GO:0045176: apical protein localization0.00E+00
7GO:0009583: detection of light stimulus0.00E+00
8GO:0071000: response to magnetism0.00E+00
9GO:0046460: neutral lipid biosynthetic process0.00E+00
10GO:0000372: Group I intron splicing0.00E+00
11GO:0000373: Group II intron splicing5.65E-05
12GO:0010582: floral meristem determinacy1.46E-04
13GO:0010158: abaxial cell fate specification2.20E-04
14GO:0048657: anther wall tapetum cell differentiation5.12E-04
15GO:1902025: nitrate import5.12E-04
16GO:0010080: regulation of floral meristem growth5.12E-04
17GO:0042547: cell wall modification involved in multidimensional cell growth5.12E-04
18GO:0072387: flavin adenine dinucleotide metabolic process5.12E-04
19GO:0043087: regulation of GTPase activity5.12E-04
20GO:0043609: regulation of carbon utilization5.12E-04
21GO:0006436: tryptophanyl-tRNA aminoacylation5.12E-04
22GO:0090548: response to nitrate starvation5.12E-04
23GO:0000066: mitochondrial ornithine transport5.12E-04
24GO:0034757: negative regulation of iron ion transport5.12E-04
25GO:0051171: regulation of nitrogen compound metabolic process5.12E-04
26GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process5.12E-04
27GO:0043971: histone H3-K18 acetylation5.12E-04
28GO:0000105: histidine biosynthetic process6.64E-04
29GO:0010271: regulation of chlorophyll catabolic process1.10E-03
30GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation1.10E-03
31GO:0006435: threonyl-tRNA aminoacylation1.10E-03
32GO:0099402: plant organ development1.10E-03
33GO:0001736: establishment of planar polarity1.10E-03
34GO:0010343: singlet oxygen-mediated programmed cell death1.10E-03
35GO:1901529: positive regulation of anion channel activity1.10E-03
36GO:0080005: photosystem stoichiometry adjustment1.10E-03
37GO:0010569: regulation of double-strand break repair via homologous recombination1.10E-03
38GO:0010617: circadian regulation of calcium ion oscillation1.10E-03
39GO:0045037: protein import into chloroplast stroma1.76E-03
40GO:0010022: meristem determinacy1.80E-03
41GO:1901672: positive regulation of systemic acquired resistance1.80E-03
42GO:0045493: xylan catabolic process1.80E-03
43GO:0030029: actin filament-based process1.80E-03
44GO:1902448: positive regulation of shade avoidance1.80E-03
45GO:0006000: fructose metabolic process1.80E-03
46GO:0080117: secondary growth1.80E-03
47GO:0006094: gluconeogenesis2.00E-03
48GO:0010411: xyloglucan metabolic process2.09E-03
49GO:0010540: basipetal auxin transport2.26E-03
50GO:0080188: RNA-directed DNA methylation2.53E-03
51GO:1901332: negative regulation of lateral root development2.61E-03
52GO:2000904: regulation of starch metabolic process2.61E-03
53GO:0051513: regulation of monopolar cell growth2.61E-03
54GO:0051639: actin filament network formation2.61E-03
55GO:0034059: response to anoxia2.61E-03
56GO:0010239: chloroplast mRNA processing2.61E-03
57GO:0044211: CTP salvage2.61E-03
58GO:0009800: cinnamic acid biosynthetic process2.61E-03
59GO:0010306: rhamnogalacturonan II biosynthetic process2.61E-03
60GO:0010255: glucose mediated signaling pathway2.61E-03
61GO:0005992: trehalose biosynthetic process3.13E-03
62GO:0006021: inositol biosynthetic process3.52E-03
63GO:0008295: spermidine biosynthetic process3.52E-03
64GO:0044206: UMP salvage3.52E-03
65GO:1902347: response to strigolactone3.52E-03
66GO:0009956: radial pattern formation3.52E-03
67GO:0051781: positive regulation of cell division3.52E-03
68GO:0051764: actin crosslink formation3.52E-03
69GO:0051322: anaphase3.52E-03
70GO:0015846: polyamine transport3.52E-03
71GO:0009926: auxin polar transport4.46E-03
72GO:0010117: photoprotection4.52E-03
73GO:0046283: anthocyanin-containing compound metabolic process4.52E-03
74GO:0031365: N-terminal protein amino acid modification4.52E-03
75GO:1902183: regulation of shoot apical meristem development4.52E-03
76GO:0080110: sporopollenin biosynthetic process4.52E-03
77GO:0009696: salicylic acid metabolic process4.52E-03
78GO:0010584: pollen exine formation4.94E-03
79GO:0009451: RNA modification5.12E-03
80GO:0006206: pyrimidine nucleobase metabolic process5.60E-03
81GO:0048827: phyllome development5.60E-03
82GO:0060918: auxin transport5.60E-03
83GO:0009920: cell plate formation involved in plant-type cell wall biogenesis5.60E-03
84GO:0048831: regulation of shoot system development5.60E-03
85GO:1901371: regulation of leaf morphogenesis5.60E-03
86GO:0003006: developmental process involved in reproduction5.60E-03
87GO:0006559: L-phenylalanine catabolic process5.60E-03
88GO:0048868: pollen tube development6.25E-03
89GO:0009958: positive gravitropism6.25E-03
90GO:0009416: response to light stimulus6.33E-03
91GO:0009942: longitudinal axis specification6.75E-03
92GO:0048509: regulation of meristem development6.75E-03
93GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity6.75E-03
94GO:0010310: regulation of hydrogen peroxide metabolic process6.75E-03
95GO:0010244: response to low fluence blue light stimulus by blue low-fluence system6.75E-03
96GO:0034389: lipid particle organization6.75E-03
97GO:0051510: regulation of unidimensional cell growth7.99E-03
98GO:0009610: response to symbiotic fungus7.99E-03
99GO:0006955: immune response7.99E-03
100GO:0010050: vegetative phase change7.99E-03
101GO:0007264: small GTPase mediated signal transduction8.27E-03
102GO:0010583: response to cyclopentenone8.27E-03
103GO:0009850: auxin metabolic process9.31E-03
104GO:0006353: DNA-templated transcription, termination9.31E-03
105GO:0070413: trehalose metabolism in response to stress9.31E-03
106GO:0007155: cell adhesion9.31E-03
107GO:0048564: photosystem I assembly9.31E-03
108GO:0009793: embryo development ending in seed dormancy9.94E-03
109GO:0009657: plastid organization1.07E-02
110GO:0032544: plastid translation1.07E-02
111GO:0007389: pattern specification process1.07E-02
112GO:0044030: regulation of DNA methylation1.07E-02
113GO:0006002: fructose 6-phosphate metabolic process1.07E-02
114GO:0071482: cellular response to light stimulus1.07E-02
115GO:0022900: electron transport chain1.07E-02
116GO:0009827: plant-type cell wall modification1.07E-02
117GO:0009911: positive regulation of flower development1.12E-02
118GO:0048507: meristem development1.22E-02
119GO:0006098: pentose-phosphate shunt1.22E-02
120GO:0090305: nucleic acid phosphodiester bond hydrolysis1.22E-02
121GO:2000024: regulation of leaf development1.22E-02
122GO:0019432: triglyceride biosynthetic process1.22E-02
123GO:0009734: auxin-activated signaling pathway1.30E-02
124GO:0080167: response to karrikin1.33E-02
125GO:0008202: steroid metabolic process1.37E-02
126GO:0016573: histone acetylation1.37E-02
127GO:1900426: positive regulation of defense response to bacterium1.37E-02
128GO:0009638: phototropism1.37E-02
129GO:0010018: far-red light signaling pathway1.37E-02
130GO:0016571: histone methylation1.37E-02
131GO:0010380: regulation of chlorophyll biosynthetic process1.37E-02
132GO:0018298: protein-chromophore linkage1.47E-02
133GO:0009817: defense response to fungus, incompatible interaction1.47E-02
134GO:0019538: protein metabolic process1.53E-02
135GO:0006535: cysteine biosynthetic process from serine1.53E-02
136GO:0048829: root cap development1.53E-02
137GO:0006259: DNA metabolic process1.53E-02
138GO:0000160: phosphorelay signal transduction system1.55E-02
139GO:0006499: N-terminal protein myristoylation1.62E-02
140GO:0006415: translational termination1.69E-02
141GO:0009750: response to fructose1.69E-02
142GO:0048765: root hair cell differentiation1.69E-02
143GO:0006265: DNA topological change1.69E-02
144GO:0009910: negative regulation of flower development1.70E-02
145GO:0006790: sulfur compound metabolic process1.86E-02
146GO:0009785: blue light signaling pathway2.04E-02
147GO:0010229: inflorescence development2.04E-02
148GO:0010075: regulation of meristem growth2.04E-02
149GO:0009767: photosynthetic electron transport chain2.04E-02
150GO:0009933: meristem structural organization2.23E-02
151GO:0009266: response to temperature stimulus2.23E-02
152GO:0048467: gynoecium development2.23E-02
153GO:0010207: photosystem II assembly2.23E-02
154GO:0010020: chloroplast fission2.23E-02
155GO:0046854: phosphatidylinositol phosphorylation2.41E-02
156GO:0009825: multidimensional cell growth2.41E-02
157GO:0042546: cell wall biogenesis2.51E-02
158GO:0006863: purine nucleobase transport2.61E-02
159GO:0006071: glycerol metabolic process2.61E-02
160GO:0042753: positive regulation of circadian rhythm2.61E-02
161GO:0009636: response to toxic substance2.71E-02
162GO:0009965: leaf morphogenesis2.71E-02
163GO:0030150: protein import into mitochondrial matrix2.81E-02
164GO:0006338: chromatin remodeling2.81E-02
165GO:0051017: actin filament bundle assembly2.81E-02
166GO:0006289: nucleotide-excision repair2.81E-02
167GO:0010187: negative regulation of seed germination2.81E-02
168GO:2000377: regulation of reactive oxygen species metabolic process2.81E-02
169GO:0019344: cysteine biosynthetic process2.81E-02
170GO:0009944: polarity specification of adaxial/abaxial axis2.81E-02
171GO:0010073: meristem maintenance3.01E-02
172GO:0006825: copper ion transport3.01E-02
173GO:0006418: tRNA aminoacylation for protein translation3.01E-02
174GO:0003333: amino acid transmembrane transport3.22E-02
175GO:0016998: cell wall macromolecule catabolic process3.22E-02
176GO:0006364: rRNA processing3.25E-02
177GO:0009736: cytokinin-activated signaling pathway3.25E-02
178GO:0035428: hexose transmembrane transport3.44E-02
179GO:0009814: defense response, incompatible interaction3.44E-02
180GO:0016226: iron-sulfur cluster assembly3.44E-02
181GO:0009658: chloroplast organization3.56E-02
182GO:0071215: cellular response to abscisic acid stimulus3.66E-02
183GO:0006096: glycolytic process3.84E-02
184GO:0006284: base-excision repair3.88E-02
185GO:0048316: seed development3.96E-02
186GO:0016117: carotenoid biosynthetic process4.11E-02
187GO:0070417: cellular response to cold4.11E-02
188GO:0010087: phloem or xylem histogenesis4.34E-02
189GO:0010118: stomatal movement4.34E-02
190GO:0009740: gibberellic acid mediated signaling pathway4.35E-02
191GO:0010154: fruit development4.58E-02
192GO:0010305: leaf vascular tissue pattern formation4.58E-02
193GO:0046323: glucose import4.58E-02
194GO:0010268: brassinosteroid homeostasis4.58E-02
195GO:0045489: pectin biosynthetic process4.58E-02
196GO:0048544: recognition of pollen4.82E-02
197GO:0042752: regulation of circadian rhythm4.82E-02
198GO:0007059: chromosome segregation4.82E-02
199GO:0009646: response to absence of light4.82E-02
200GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.82E-02
RankGO TermAdjusted P value
1GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
2GO:0004401: histidinol-phosphatase activity0.00E+00
3GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
4GO:0052834: inositol monophosphate phosphatase activity0.00E+00
5GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
6GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
7GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
8GO:0019808: polyamine binding0.00E+00
9GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
10GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity5.12E-04
11GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.12E-04
12GO:0004830: tryptophan-tRNA ligase activity5.12E-04
13GO:0003879: ATP phosphoribosyltransferase activity5.12E-04
14GO:0010347: L-galactose-1-phosphate phosphatase activity5.12E-04
15GO:0047807: cytokinin 7-beta-glucosyltransferase activity5.12E-04
16GO:0042834: peptidoglycan binding5.12E-04
17GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity5.12E-04
18GO:0005290: L-histidine transmembrane transporter activity5.12E-04
19GO:0080062: cytokinin 9-beta-glucosyltransferase activity5.12E-04
20GO:0004008: copper-exporting ATPase activity5.12E-04
21GO:0043621: protein self-association8.94E-04
22GO:0050736: O-malonyltransferase activity1.10E-03
23GO:0009884: cytokinin receptor activity1.10E-03
24GO:0050017: L-3-cyanoalanine synthase activity1.10E-03
25GO:0004047: aminomethyltransferase activity1.10E-03
26GO:0004766: spermidine synthase activity1.10E-03
27GO:0052832: inositol monophosphate 3-phosphatase activity1.10E-03
28GO:0008805: carbon-monoxide oxygenase activity1.10E-03
29GO:0008934: inositol monophosphate 1-phosphatase activity1.10E-03
30GO:0004829: threonine-tRNA ligase activity1.10E-03
31GO:0052833: inositol monophosphate 4-phosphatase activity1.10E-03
32GO:0000064: L-ornithine transmembrane transporter activity1.10E-03
33GO:0004805: trehalose-phosphatase activity1.33E-03
34GO:0016805: dipeptidase activity1.80E-03
35GO:0005034: osmosensor activity1.80E-03
36GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.80E-03
37GO:0045548: phenylalanine ammonia-lyase activity1.80E-03
38GO:0003913: DNA photolyase activity1.80E-03
39GO:0032549: ribonucleoside binding1.80E-03
40GO:0004148: dihydrolipoyl dehydrogenase activity1.80E-03
41GO:0009882: blue light photoreceptor activity2.61E-03
42GO:0080031: methyl salicylate esterase activity2.61E-03
43GO:0015189: L-lysine transmembrane transporter activity2.61E-03
44GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.61E-03
45GO:0000254: C-4 methylsterol oxidase activity2.61E-03
46GO:0015181: arginine transmembrane transporter activity2.61E-03
47GO:0043424: protein histidine kinase binding3.46E-03
48GO:0042277: peptide binding3.52E-03
49GO:0046556: alpha-L-arabinofuranosidase activity3.52E-03
50GO:0004845: uracil phosphoribosyltransferase activity3.52E-03
51GO:0010011: auxin binding3.52E-03
52GO:0010328: auxin influx transmembrane transporter activity3.52E-03
53GO:0070628: proteasome binding3.52E-03
54GO:0010385: double-stranded methylated DNA binding3.52E-03
55GO:0009044: xylan 1,4-beta-xylosidase activity3.52E-03
56GO:0005471: ATP:ADP antiporter activity4.52E-03
57GO:0008725: DNA-3-methyladenine glycosylase activity4.52E-03
58GO:0030570: pectate lyase activity4.54E-03
59GO:2001070: starch binding5.60E-03
60GO:0080030: methyl indole-3-acetate esterase activity5.60E-03
61GO:0004332: fructose-bisphosphate aldolase activity5.60E-03
62GO:0031593: polyubiquitin binding5.60E-03
63GO:0005525: GTP binding5.92E-03
64GO:0004144: diacylglycerol O-acyltransferase activity6.75E-03
65GO:0004656: procollagen-proline 4-dioxygenase activity6.75E-03
66GO:0019900: kinase binding6.75E-03
67GO:0004124: cysteine synthase activity6.75E-03
68GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity6.75E-03
69GO:0004849: uridine kinase activity6.75E-03
70GO:0003924: GTPase activity7.13E-03
71GO:0019901: protein kinase binding7.22E-03
72GO:0016762: xyloglucan:xyloglucosyl transferase activity7.73E-03
73GO:0008235: metalloexopeptidase activity7.99E-03
74GO:0009881: photoreceptor activity7.99E-03
75GO:0019899: enzyme binding7.99E-03
76GO:0004518: nuclease activity8.27E-03
77GO:0043022: ribosome binding9.31E-03
78GO:0005375: copper ion transmembrane transporter activity1.07E-02
79GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.07E-02
80GO:0008142: oxysterol binding1.07E-02
81GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.09E-02
82GO:0003747: translation release factor activity1.22E-02
83GO:0071949: FAD binding1.22E-02
84GO:0003723: RNA binding1.29E-02
85GO:0016798: hydrolase activity, acting on glycosyl bonds1.33E-02
86GO:0004721: phosphoprotein phosphatase activity1.33E-02
87GO:0009672: auxin:proton symporter activity1.37E-02
88GO:0004673: protein histidine kinase activity1.53E-02
89GO:0015020: glucuronosyltransferase activity1.53E-02
90GO:0005096: GTPase activator activity1.55E-02
91GO:0008327: methyl-CpG binding1.69E-02
92GO:0001054: RNA polymerase I activity1.69E-02
93GO:0004177: aminopeptidase activity1.69E-02
94GO:0010329: auxin efflux transmembrane transporter activity2.04E-02
95GO:0015266: protein channel activity2.04E-02
96GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.04E-02
97GO:0000155: phosphorelay sensor kinase activity2.04E-02
98GO:0009982: pseudouridine synthase activity2.04E-02
99GO:0003725: double-stranded RNA binding2.04E-02
100GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.61E-02
101GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.61E-02
102GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.61E-02
103GO:0035091: phosphatidylinositol binding2.61E-02
104GO:0004519: endonuclease activity2.71E-02
105GO:0042802: identical protein binding2.78E-02
106GO:0031418: L-ascorbic acid binding2.81E-02
107GO:0043130: ubiquitin binding2.81E-02
108GO:0005345: purine nucleobase transmembrane transporter activity3.01E-02
109GO:0004812: aminoacyl-tRNA ligase activity4.11E-02
110GO:0080043: quercetin 3-O-glucosyltransferase activity4.22E-02
111GO:0080044: quercetin 7-O-glucosyltransferase activity4.22E-02
112GO:0004402: histone acetyltransferase activity4.34E-02
113GO:0008536: Ran GTPase binding4.58E-02
114GO:0001085: RNA polymerase II transcription factor binding4.58E-02
115GO:0010181: FMN binding4.82E-02
116GO:0005355: glucose transmembrane transporter activity4.82E-02
117GO:0050662: coenzyme binding4.82E-02
118GO:0004672: protein kinase activity4.97E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0009537: proplastid0.00E+00
3GO:0035452: extrinsic component of plastid membrane0.00E+00
4GO:0009507: chloroplast7.05E-08
5GO:0010370: perinucleolar chromocenter5.12E-04
6GO:0045254: pyruvate dehydrogenase complex1.10E-03
7GO:0009513: etioplast1.10E-03
8GO:0009509: chromoplast1.80E-03
9GO:0016605: PML body1.80E-03
10GO:0009574: preprophase band2.00E-03
11GO:0032432: actin filament bundle2.61E-03
12GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)3.52E-03
13GO:0009532: plastid stroma3.80E-03
14GO:0005655: nucleolar ribonuclease P complex6.75E-03
15GO:0009570: chloroplast stroma7.48E-03
16GO:0009986: cell surface7.99E-03
17GO:0031305: integral component of mitochondrial inner membrane9.31E-03
18GO:0009501: amyloplast9.31E-03
19GO:0005811: lipid particle1.07E-02
20GO:0030529: intracellular ribonucleoprotein complex1.12E-02
21GO:0005720: nuclear heterochromatin1.22E-02
22GO:0005736: DNA-directed RNA polymerase I complex1.22E-02
23GO:0016604: nuclear body1.37E-02
24GO:0005884: actin filament1.69E-02
25GO:0016602: CCAAT-binding factor complex2.04E-02
26GO:0005578: proteinaceous extracellular matrix2.04E-02
27GO:0009505: plant-type cell wall3.74E-02
28GO:0005744: mitochondrial inner membrane presequence translocase complex3.88E-02
29GO:0005770: late endosome4.58E-02
30GO:0009706: chloroplast inner membrane4.61E-02
31GO:0009535: chloroplast thylakoid membrane4.85E-02
<
Gene type



Gene DE type