| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 2 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0042407: cristae formation | 0.00E+00 |
| 6 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 7 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 8 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 9 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 10 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 11 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 12 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 13 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 14 | GO:0000476: maturation of 4.5S rRNA | 0.00E+00 |
| 15 | GO:0000967: rRNA 5'-end processing | 0.00E+00 |
| 16 | GO:1901259: chloroplast rRNA processing | 4.27E-08 |
| 17 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.76E-06 |
| 18 | GO:0034470: ncRNA processing | 5.76E-06 |
| 19 | GO:0009657: plastid organization | 1.75E-05 |
| 20 | GO:0009658: chloroplast organization | 2.82E-05 |
| 21 | GO:1905039: carboxylic acid transmembrane transport | 3.57E-04 |
| 22 | GO:0080112: seed growth | 3.57E-04 |
| 23 | GO:1905200: gibberellic acid transmembrane transport | 3.57E-04 |
| 24 | GO:0005980: glycogen catabolic process | 3.57E-04 |
| 25 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 3.57E-04 |
| 26 | GO:1904966: positive regulation of vitamin E biosynthetic process | 3.57E-04 |
| 27 | GO:1904964: positive regulation of phytol biosynthetic process | 3.57E-04 |
| 28 | GO:0042371: vitamin K biosynthetic process | 3.57E-04 |
| 29 | GO:0043686: co-translational protein modification | 3.57E-04 |
| 30 | GO:0043007: maintenance of rDNA | 3.57E-04 |
| 31 | GO:0034337: RNA folding | 3.57E-04 |
| 32 | GO:0005991: trehalose metabolic process | 3.57E-04 |
| 33 | GO:0006353: DNA-templated transcription, termination | 3.92E-04 |
| 34 | GO:0032544: plastid translation | 4.81E-04 |
| 35 | GO:0019252: starch biosynthetic process | 4.97E-04 |
| 36 | GO:0032502: developmental process | 5.89E-04 |
| 37 | GO:0006423: cysteinyl-tRNA aminoacylation | 7.77E-04 |
| 38 | GO:0018026: peptidyl-lysine monomethylation | 7.77E-04 |
| 39 | GO:0042325: regulation of phosphorylation | 7.77E-04 |
| 40 | GO:1904143: positive regulation of carotenoid biosynthetic process | 7.77E-04 |
| 41 | GO:0006568: tryptophan metabolic process | 7.77E-04 |
| 42 | GO:0010027: thylakoid membrane organization | 8.65E-04 |
| 43 | GO:0009773: photosynthetic electron transport in photosystem I | 9.13E-04 |
| 44 | GO:0006415: translational termination | 9.13E-04 |
| 45 | GO:0015995: chlorophyll biosynthetic process | 1.06E-03 |
| 46 | GO:0006954: inflammatory response | 1.26E-03 |
| 47 | GO:0034051: negative regulation of plant-type hypersensitive response | 1.26E-03 |
| 48 | GO:0006696: ergosterol biosynthetic process | 1.26E-03 |
| 49 | GO:0005977: glycogen metabolic process | 1.26E-03 |
| 50 | GO:0034599: cellular response to oxidative stress | 1.72E-03 |
| 51 | GO:0046739: transport of virus in multicellular host | 1.81E-03 |
| 52 | GO:0006168: adenine salvage | 1.81E-03 |
| 53 | GO:0016556: mRNA modification | 1.81E-03 |
| 54 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.81E-03 |
| 55 | GO:0045338: farnesyl diphosphate metabolic process | 1.81E-03 |
| 56 | GO:0006166: purine ribonucleoside salvage | 1.81E-03 |
| 57 | GO:0006020: inositol metabolic process | 1.81E-03 |
| 58 | GO:0009102: biotin biosynthetic process | 1.81E-03 |
| 59 | GO:0009152: purine ribonucleotide biosynthetic process | 1.81E-03 |
| 60 | GO:0010601: positive regulation of auxin biosynthetic process | 1.81E-03 |
| 61 | GO:0046653: tetrahydrofolate metabolic process | 1.81E-03 |
| 62 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.81E-03 |
| 63 | GO:0006418: tRNA aminoacylation for protein translation | 2.03E-03 |
| 64 | GO:0006221: pyrimidine nucleotide biosynthetic process | 2.44E-03 |
| 65 | GO:0006021: inositol biosynthetic process | 2.44E-03 |
| 66 | GO:0010021: amylopectin biosynthetic process | 2.44E-03 |
| 67 | GO:0009765: photosynthesis, light harvesting | 2.44E-03 |
| 68 | GO:0010107: potassium ion import | 2.44E-03 |
| 69 | GO:0022622: root system development | 2.44E-03 |
| 70 | GO:0016042: lipid catabolic process | 2.61E-03 |
| 71 | GO:0009686: gibberellin biosynthetic process | 2.66E-03 |
| 72 | GO:0032543: mitochondrial translation | 3.11E-03 |
| 73 | GO:0098719: sodium ion import across plasma membrane | 3.11E-03 |
| 74 | GO:0006564: L-serine biosynthetic process | 3.11E-03 |
| 75 | GO:0010236: plastoquinone biosynthetic process | 3.11E-03 |
| 76 | GO:0031365: N-terminal protein amino acid modification | 3.11E-03 |
| 77 | GO:0044209: AMP salvage | 3.11E-03 |
| 78 | GO:0006662: glycerol ether metabolic process | 3.64E-03 |
| 79 | GO:0010197: polar nucleus fusion | 3.64E-03 |
| 80 | GO:0009958: positive gravitropism | 3.64E-03 |
| 81 | GO:1902456: regulation of stomatal opening | 3.85E-03 |
| 82 | GO:0042793: transcription from plastid promoter | 3.85E-03 |
| 83 | GO:0010190: cytochrome b6f complex assembly | 3.85E-03 |
| 84 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 3.85E-03 |
| 85 | GO:0032973: amino acid export | 3.85E-03 |
| 86 | GO:0000741: karyogamy | 3.85E-03 |
| 87 | GO:0046855: inositol phosphate dephosphorylation | 3.85E-03 |
| 88 | GO:0009643: photosynthetic acclimation | 3.85E-03 |
| 89 | GO:0009959: negative gravitropism | 3.85E-03 |
| 90 | GO:0042372: phylloquinone biosynthetic process | 4.64E-03 |
| 91 | GO:0042026: protein refolding | 4.64E-03 |
| 92 | GO:0006458: 'de novo' protein folding | 4.64E-03 |
| 93 | GO:0048280: vesicle fusion with Golgi apparatus | 4.64E-03 |
| 94 | GO:0080086: stamen filament development | 4.64E-03 |
| 95 | GO:0009955: adaxial/abaxial pattern specification | 4.64E-03 |
| 96 | GO:1901657: glycosyl compound metabolic process | 5.12E-03 |
| 97 | GO:0048437: floral organ development | 5.48E-03 |
| 98 | GO:0009645: response to low light intensity stimulus | 5.48E-03 |
| 99 | GO:0009769: photosynthesis, light harvesting in photosystem II | 5.48E-03 |
| 100 | GO:0032880: regulation of protein localization | 5.48E-03 |
| 101 | GO:0010161: red light signaling pathway | 5.48E-03 |
| 102 | GO:0009772: photosynthetic electron transport in photosystem II | 5.48E-03 |
| 103 | GO:0043090: amino acid import | 5.48E-03 |
| 104 | GO:0042255: ribosome assembly | 6.37E-03 |
| 105 | GO:0046620: regulation of organ growth | 6.37E-03 |
| 106 | GO:0070413: trehalose metabolism in response to stress | 6.37E-03 |
| 107 | GO:0010078: maintenance of root meristem identity | 6.37E-03 |
| 108 | GO:0055075: potassium ion homeostasis | 6.37E-03 |
| 109 | GO:0052543: callose deposition in cell wall | 6.37E-03 |
| 110 | GO:0015979: photosynthesis | 7.16E-03 |
| 111 | GO:0010497: plasmodesmata-mediated intercellular transport | 7.30E-03 |
| 112 | GO:0010100: negative regulation of photomorphogenesis | 7.30E-03 |
| 113 | GO:0043562: cellular response to nitrogen levels | 7.30E-03 |
| 114 | GO:0010099: regulation of photomorphogenesis | 7.30E-03 |
| 115 | GO:0009416: response to light stimulus | 7.52E-03 |
| 116 | GO:0080144: amino acid homeostasis | 8.29E-03 |
| 117 | GO:0090333: regulation of stomatal closure | 8.29E-03 |
| 118 | GO:0046916: cellular transition metal ion homeostasis | 8.29E-03 |
| 119 | GO:0006783: heme biosynthetic process | 8.29E-03 |
| 120 | GO:0046685: response to arsenic-containing substance | 8.29E-03 |
| 121 | GO:0009821: alkaloid biosynthetic process | 8.29E-03 |
| 122 | GO:0018298: protein-chromophore linkage | 8.51E-03 |
| 123 | GO:0051453: regulation of intracellular pH | 9.31E-03 |
| 124 | GO:0005982: starch metabolic process | 9.31E-03 |
| 125 | GO:0009638: phototropism | 9.31E-03 |
| 126 | GO:0043067: regulation of programmed cell death | 9.31E-03 |
| 127 | GO:0006779: porphyrin-containing compound biosynthetic process | 9.31E-03 |
| 128 | GO:0048527: lateral root development | 9.85E-03 |
| 129 | GO:0006896: Golgi to vacuole transport | 1.04E-02 |
| 130 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.04E-02 |
| 131 | GO:0045036: protein targeting to chloroplast | 1.04E-02 |
| 132 | GO:0072593: reactive oxygen species metabolic process | 1.15E-02 |
| 133 | GO:0015770: sucrose transport | 1.15E-02 |
| 134 | GO:0009684: indoleacetic acid biosynthetic process | 1.15E-02 |
| 135 | GO:0019684: photosynthesis, light reaction | 1.15E-02 |
| 136 | GO:0006790: sulfur compound metabolic process | 1.27E-02 |
| 137 | GO:2000012: regulation of auxin polar transport | 1.39E-02 |
| 138 | GO:0010628: positive regulation of gene expression | 1.39E-02 |
| 139 | GO:0009767: photosynthetic electron transport chain | 1.39E-02 |
| 140 | GO:0010588: cotyledon vascular tissue pattern formation | 1.39E-02 |
| 141 | GO:0010114: response to red light | 1.40E-02 |
| 142 | GO:0051707: response to other organism | 1.40E-02 |
| 143 | GO:0010207: photosystem II assembly | 1.51E-02 |
| 144 | GO:0009266: response to temperature stimulus | 1.51E-02 |
| 145 | GO:0048467: gynoecium development | 1.51E-02 |
| 146 | GO:0006855: drug transmembrane transport | 1.63E-02 |
| 147 | GO:0009901: anther dehiscence | 1.64E-02 |
| 148 | GO:0019853: L-ascorbic acid biosynthetic process | 1.64E-02 |
| 149 | GO:0046854: phosphatidylinositol phosphorylation | 1.64E-02 |
| 150 | GO:0080147: root hair cell development | 1.90E-02 |
| 151 | GO:0010187: negative regulation of seed germination | 1.90E-02 |
| 152 | GO:0005992: trehalose biosynthetic process | 1.90E-02 |
| 153 | GO:0005975: carbohydrate metabolic process | 1.93E-02 |
| 154 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.04E-02 |
| 155 | GO:0019915: lipid storage | 2.18E-02 |
| 156 | GO:0061077: chaperone-mediated protein folding | 2.18E-02 |
| 157 | GO:0009269: response to desiccation | 2.18E-02 |
| 158 | GO:0048367: shoot system development | 2.31E-02 |
| 159 | GO:0016226: iron-sulfur cluster assembly | 2.33E-02 |
| 160 | GO:0006730: one-carbon metabolic process | 2.33E-02 |
| 161 | GO:0006012: galactose metabolic process | 2.48E-02 |
| 162 | GO:0009306: protein secretion | 2.63E-02 |
| 163 | GO:0006396: RNA processing | 2.77E-02 |
| 164 | GO:0042147: retrograde transport, endosome to Golgi | 2.79E-02 |
| 165 | GO:0008284: positive regulation of cell proliferation | 2.79E-02 |
| 166 | GO:0016117: carotenoid biosynthetic process | 2.79E-02 |
| 167 | GO:0009742: brassinosteroid mediated signaling pathway | 2.85E-02 |
| 168 | GO:0080022: primary root development | 2.95E-02 |
| 169 | GO:0010087: phloem or xylem histogenesis | 2.95E-02 |
| 170 | GO:0045454: cell redox homeostasis | 2.96E-02 |
| 171 | GO:0010182: sugar mediated signaling pathway | 3.11E-02 |
| 172 | GO:0009741: response to brassinosteroid | 3.11E-02 |
| 173 | GO:0010268: brassinosteroid homeostasis | 3.11E-02 |
| 174 | GO:0006885: regulation of pH | 3.11E-02 |
| 175 | GO:0006814: sodium ion transport | 3.27E-02 |
| 176 | GO:0009646: response to absence of light | 3.27E-02 |
| 177 | GO:0048825: cotyledon development | 3.44E-02 |
| 178 | GO:0009556: microsporogenesis | 3.44E-02 |
| 179 | GO:0009851: auxin biosynthetic process | 3.44E-02 |
| 180 | GO:0006623: protein targeting to vacuole | 3.44E-02 |
| 181 | GO:0007165: signal transduction | 3.49E-02 |
| 182 | GO:0009058: biosynthetic process | 3.55E-02 |
| 183 | GO:0071554: cell wall organization or biogenesis | 3.61E-02 |
| 184 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.61E-02 |
| 185 | GO:0016132: brassinosteroid biosynthetic process | 3.61E-02 |
| 186 | GO:0009790: embryo development | 3.92E-02 |
| 187 | GO:0016125: sterol metabolic process | 4.14E-02 |
| 188 | GO:0006413: translational initiation | 4.32E-02 |
| 189 | GO:0016126: sterol biosynthetic process | 4.69E-02 |
| 190 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.84E-02 |
| 191 | GO:0010029: regulation of seed germination | 4.88E-02 |
| 192 | GO:0009607: response to biotic stimulus | 4.88E-02 |