co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00330

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010055: atrichoblast differentiation	0.00E+00
2	GO:1902001: fatty acid transmembrane transport	0.00E+00
3	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
6	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
7	GO:0002376: immune system process	0.00E+00
8	GO:0046865: terpenoid transport	0.00E+00
9	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
10	GO:0010324: membrane invagination	0.00E+00
11	GO:0006952: defense response	1.11E-07
12	GO:0009611: response to wounding	1.75E-05
13	GO:0010112: regulation of systemic acquired resistance	1.91E-05
14	GO:0042391: regulation of membrane potential	1.93E-05
15	GO:0042742: defense response to bacterium	3.84E-05
16	GO:0006979: response to oxidative stress	3.96E-05
17	GO:0031347: regulation of defense response	4.07E-05
18	GO:1903507: negative regulation of nucleic acid-templated transcription	4.25E-05
19	GO:0009643: photosynthetic acclimation	1.52E-04
20	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.96E-04
21	GO:0071456: cellular response to hypoxia	1.96E-04
22	GO:1900057: positive regulation of leaf senescence	2.70E-04
23	GO:0051707: response to other organism	2.73E-04
24	GO:0048508: embryonic meristem development	3.24E-04
25	GO:0015760: glucose-6-phosphate transport	3.24E-04
26	GO:0080173: male-female gamete recognition during double fertilization	3.24E-04
27	GO:0033306: phytol metabolic process	3.24E-04
28	GO:0009700: indole phytoalexin biosynthetic process	3.24E-04
29	GO:0010230: alternative respiration	3.24E-04
30	GO:0034214: protein hexamerization	3.24E-04
31	GO:1990542: mitochondrial transmembrane transport	3.24E-04
32	GO:0032107: regulation of response to nutrient levels	3.24E-04
33	GO:0010120: camalexin biosynthetic process	4.17E-04
34	GO:0050832: defense response to fungus	4.33E-04
35	GO:0006098: pentose-phosphate shunt	5.01E-04
36	GO:0009751: response to salicylic acid	5.03E-04
37	GO:0009753: response to jasmonic acid	5.98E-04
38	GO:0009838: abscission	7.07E-04
39	GO:0080181: lateral root branching	7.07E-04
40	GO:0055088: lipid homeostasis	7.07E-04
41	GO:0050684: regulation of mRNA processing	7.07E-04
42	GO:0019521: D-gluconate metabolic process	7.07E-04
43	GO:0015908: fatty acid transport	7.07E-04
44	GO:0044419: interspecies interaction between organisms	7.07E-04
45	GO:0009945: radial axis specification	7.07E-04
46	GO:0015712: hexose phosphate transport	7.07E-04
47	GO:0051258: protein polymerization	7.07E-04
48	GO:0019725: cellular homeostasis	7.07E-04
49	GO:0071668: plant-type cell wall assembly	7.07E-04
50	GO:0019441: tryptophan catabolic process to kynurenine	7.07E-04
51	GO:0015914: phospholipid transport	7.07E-04
52	GO:0080167: response to karrikin	1.07E-03
53	GO:0010311: lateral root formation	1.07E-03
54	GO:0015692: lead ion transport	1.15E-03
55	GO:0015695: organic cation transport	1.15E-03
56	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	1.15E-03
57	GO:0015714: phosphoenolpyruvate transport	1.15E-03
58	GO:0080168: abscisic acid transport	1.15E-03
59	GO:1900055: regulation of leaf senescence	1.15E-03
60	GO:0002230: positive regulation of defense response to virus by host	1.15E-03
61	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.15E-03
62	GO:0006954: inflammatory response	1.15E-03
63	GO:0032784: regulation of DNA-templated transcription, elongation	1.15E-03
64	GO:0035436: triose phosphate transmembrane transport	1.15E-03
65	GO:0010186: positive regulation of cellular defense response	1.15E-03
66	GO:0010366: negative regulation of ethylene biosynthetic process	1.15E-03
67	GO:0007568: aging	1.20E-03
68	GO:0007165: signal transduction	1.29E-03
69	GO:2000377: regulation of reactive oxygen species metabolic process	1.59E-03
70	GO:0006020: inositol metabolic process	1.65E-03
71	GO:0015696: ammonium transport	1.65E-03
72	GO:0051289: protein homotetramerization	1.65E-03
73	GO:1902290: positive regulation of defense response to oomycetes	1.65E-03
74	GO:0001676: long-chain fatty acid metabolic process	1.65E-03
75	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.65E-03
76	GO:0010109: regulation of photosynthesis	2.21E-03
77	GO:0060548: negative regulation of cell death	2.21E-03
78	GO:0048638: regulation of developmental growth	2.21E-03
79	GO:0072488: ammonium transmembrane transport	2.21E-03
80	GO:0006621: protein retention in ER lumen	2.21E-03
81	GO:0015713: phosphoglycerate transport	2.21E-03
82	GO:1901141: regulation of lignin biosynthetic process	2.21E-03
83	GO:0009617: response to bacterium	2.27E-03
84	GO:0006012: galactose metabolic process	2.30E-03
85	GO:0016094: polyprenol biosynthetic process	2.82E-03
86	GO:0034052: positive regulation of plant-type hypersensitive response	2.82E-03
87	GO:0009164: nucleoside catabolic process	2.82E-03
88	GO:0000304: response to singlet oxygen	2.82E-03
89	GO:0031365: N-terminal protein amino acid modification	2.82E-03
90	GO:0010256: endomembrane system organization	3.49E-03
91	GO:0009117: nucleotide metabolic process	3.49E-03
92	GO:0006574: valine catabolic process	3.49E-03
93	GO:0009759: indole glucosinolate biosynthetic process	3.49E-03
94	GO:0010193: response to ozone	3.89E-03
95	GO:0009094: L-phenylalanine biosynthetic process	4.20E-03
96	GO:0042372: phylloquinone biosynthetic process	4.20E-03
97	GO:0009942: longitudinal axis specification	4.20E-03
98	GO:0010200: response to chitin	4.94E-03
99	GO:0043090: amino acid import	4.95E-03
100	GO:0071446: cellular response to salicylic acid stimulus	4.95E-03
101	GO:1900056: negative regulation of leaf senescence	4.95E-03
102	GO:0050829: defense response to Gram-negative bacterium	4.95E-03
103	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.95E-03
104	GO:1902074: response to salt	4.95E-03
105	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	4.95E-03
106	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.76E-03
107	GO:0009819: drought recovery	5.76E-03
108	GO:0030091: protein repair	5.76E-03
109	GO:0043068: positive regulation of programmed cell death	5.76E-03
110	GO:0009627: systemic acquired resistance	6.29E-03
111	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.60E-03
112	GO:0010208: pollen wall assembly	6.60E-03
113	GO:0009699: phenylpropanoid biosynthetic process	6.60E-03
114	GO:0006997: nucleus organization	6.60E-03
115	GO:0010204: defense response signaling pathway, resistance gene-independent	6.60E-03
116	GO:0030968: endoplasmic reticulum unfolded protein response	6.60E-03
117	GO:0006950: response to stress	6.63E-03
118	GO:0006468: protein phosphorylation	7.16E-03
119	GO:0009835: fruit ripening	7.48E-03
120	GO:0019432: triglyceride biosynthetic process	7.48E-03
121	GO:0009407: toxin catabolic process	8.11E-03
122	GO:0009638: phototropism	8.41E-03
123	GO:0090332: stomatal closure	8.41E-03
124	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.41E-03
125	GO:1900426: positive regulation of defense response to bacterium	8.41E-03
126	GO:0048527: lateral root development	8.51E-03
127	GO:0010150: leaf senescence	8.59E-03
128	GO:0009867: jasmonic acid mediated signaling pathway	9.33E-03
129	GO:0010629: negative regulation of gene expression	9.37E-03
130	GO:0019538: protein metabolic process	9.37E-03
131	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.37E-03
132	GO:0006032: chitin catabolic process	9.37E-03
133	GO:0043069: negative regulation of programmed cell death	9.37E-03
134	GO:0007166: cell surface receptor signaling pathway	1.02E-02
135	GO:0009684: indoleacetic acid biosynthetic process	1.04E-02
136	GO:0048229: gametophyte development	1.04E-02
137	GO:0012501: programmed cell death	1.14E-02
138	GO:0002213: defense response to insect	1.14E-02
139	GO:0009785: blue light signaling pathway	1.25E-02
140	GO:0002237: response to molecule of bacterial origin	1.36E-02
141	GO:0009636: response to toxic substance	1.36E-02
142	GO:0006855: drug transmembrane transport	1.41E-02
143	GO:0042343: indole glucosinolate metabolic process	1.48E-02
144	GO:0000162: tryptophan biosynthetic process	1.60E-02
145	GO:0080147: root hair cell development	1.72E-02
146	GO:0043622: cortical microtubule organization	1.84E-02
147	GO:0009695: jasmonic acid biosynthetic process	1.84E-02
148	GO:0098542: defense response to other organism	1.97E-02
149	GO:0009269: response to desiccation	1.97E-02
150	GO:0016998: cell wall macromolecule catabolic process	1.97E-02
151	GO:0009626: plant-type hypersensitive response	2.06E-02
152	GO:0009620: response to fungus	2.12E-02
153	GO:0009693: ethylene biosynthetic process	2.23E-02
154	GO:0009625: response to insect	2.23E-02
155	GO:0009624: response to nematode	2.32E-02
156	GO:0070417: cellular response to cold	2.51E-02
157	GO:0008284: positive regulation of cell proliferation	2.51E-02
158	GO:0000271: polysaccharide biosynthetic process	2.65E-02
159	GO:0000413: protein peptidyl-prolyl isomerization	2.65E-02
160	GO:0009737: response to abscisic acid	2.78E-02
161	GO:0045489: pectin biosynthetic process	2.80E-02
162	GO:0006885: regulation of pH	2.80E-02
163	GO:0006520: cellular amino acid metabolic process	2.80E-02
164	GO:0048868: pollen tube development	2.80E-02
165	GO:0009646: response to absence of light	2.95E-02
166	GO:0006623: protein targeting to vacuole	3.10E-02
167	GO:0009749: response to glucose	3.10E-02
168	GO:0002229: defense response to oomycetes	3.25E-02
169	GO:0000302: response to reactive oxygen species	3.25E-02
170	GO:0006635: fatty acid beta-oxidation	3.25E-02
171	GO:0009630: gravitropism	3.41E-02
172	GO:1901657: glycosyl compound metabolic process	3.57E-02
173	GO:0016310: phosphorylation	3.60E-02
174	GO:0008152: metabolic process	3.61E-02
175	GO:0006904: vesicle docking involved in exocytosis	3.89E-02
176	GO:0051607: defense response to virus	4.06E-02
177	GO:0009615: response to virus	4.23E-02
178	GO:0009816: defense response to bacterium, incompatible interaction	4.40E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0030552: cAMP binding	3.11E-06
3	GO:0030553: cGMP binding	3.11E-06
4	GO:0005216: ion channel activity	6.33E-06
5	GO:0016301: kinase activity	1.86E-05
6	GO:0030551: cyclic nucleotide binding	1.93E-05
7	GO:0005249: voltage-gated potassium channel activity	1.93E-05
8	GO:0003714: transcription corepressor activity	1.30E-04
9	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.07E-04
10	GO:2001227: quercitrin binding	3.24E-04
11	GO:0000386: second spliceosomal transesterification activity	3.24E-04
12	GO:0019707: protein-cysteine S-acyltransferase activity	3.24E-04
13	GO:0047940: glucuronokinase activity	3.24E-04
14	GO:2001147: camalexin binding	3.24E-04
15	GO:0015245: fatty acid transporter activity	3.24E-04
16	GO:0090353: polygalacturonase inhibitor activity	3.24E-04
17	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.24E-04
18	GO:0015152: glucose-6-phosphate transmembrane transporter activity	7.07E-04
19	GO:0004061: arylformamidase activity	7.07E-04
20	GO:0004385: guanylate kinase activity	7.07E-04
21	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.15E-03
22	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.15E-03
23	GO:0032403: protein complex binding	1.15E-03
24	GO:0071917: triose-phosphate transmembrane transporter activity	1.15E-03
25	GO:0017077: oxidative phosphorylation uncoupler activity	1.65E-03
26	GO:0004674: protein serine/threonine kinase activity	1.94E-03
27	GO:0004834: tryptophan synthase activity	2.21E-03
28	GO:0004664: prephenate dehydratase activity	2.21E-03
29	GO:0046923: ER retention sequence binding	2.21E-03
30	GO:0003995: acyl-CoA dehydrogenase activity	2.21E-03
31	GO:0009916: alternative oxidase activity	2.21E-03
32	GO:0015120: phosphoglycerate transmembrane transporter activity	2.21E-03
33	GO:0047769: arogenate dehydratase activity	2.21E-03
34	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.50E-03
35	GO:0005524: ATP binding	2.54E-03
36	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.82E-03
37	GO:0002094: polyprenyltransferase activity	2.82E-03
38	GO:0003997: acyl-CoA oxidase activity	2.82E-03
39	GO:0005496: steroid binding	2.82E-03
40	GO:0008519: ammonium transmembrane transporter activity	3.49E-03
41	GO:0005516: calmodulin binding	3.63E-03
42	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.20E-03
43	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.20E-03
44	GO:0102391: decanoate--CoA ligase activity	4.20E-03
45	GO:0005261: cation channel activity	4.20E-03
46	GO:0003978: UDP-glucose 4-epimerase activity	4.20E-03
47	GO:0004144: diacylglycerol O-acyltransferase activity	4.20E-03
48	GO:0004656: procollagen-proline 4-dioxygenase activity	4.20E-03
49	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.20E-03
50	GO:0004497: monooxygenase activity	4.69E-03
51	GO:0008235: metalloexopeptidase activity	4.95E-03
52	GO:0008320: protein transmembrane transporter activity	4.95E-03
53	GO:0043295: glutathione binding	4.95E-03
54	GO:0004467: long-chain fatty acid-CoA ligase activity	4.95E-03
55	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	5.76E-03
56	GO:0004034: aldose 1-epimerase activity	5.76E-03
57	GO:0005544: calcium-dependent phospholipid binding	5.76E-03
58	GO:0004033: aldo-keto reductase (NADP) activity	5.76E-03
59	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.76E-03
60	GO:0004806: triglyceride lipase activity	6.63E-03
61	GO:0030247: polysaccharide binding	6.63E-03
62	GO:0016207: 4-coumarate-CoA ligase activity	7.48E-03
63	GO:0071949: FAD binding	7.48E-03
64	GO:0047617: acyl-CoA hydrolase activity	8.41E-03
65	GO:0004568: chitinase activity	9.37E-03
66	GO:0030246: carbohydrate binding	9.78E-03
67	GO:0004177: aminopeptidase activity	1.04E-02
68	GO:0050661: NADP binding	1.06E-02
69	GO:0004364: glutathione transferase activity	1.16E-02
70	GO:0005315: inorganic phosphate transmembrane transporter activity	1.25E-02
71	GO:0043565: sequence-specific DNA binding	1.26E-02
72	GO:0008266: poly(U) RNA binding	1.36E-02
73	GO:0043531: ADP binding	1.68E-02
74	GO:0001046: core promoter sequence-specific DNA binding	1.72E-02
75	GO:0050660: flavin adenine dinucleotide binding	1.80E-02
76	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.97E-02
77	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.10E-02
78	GO:0003727: single-stranded RNA binding	2.37E-02
79	GO:0042803: protein homodimerization activity	2.62E-02
80	GO:0005451: monovalent cation:proton antiporter activity	2.65E-02
81	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.72E-02
82	GO:0016757: transferase activity, transferring glycosyl groups	2.81E-02
83	GO:0016758: transferase activity, transferring hexosyl groups	2.83E-02
84	GO:0016853: isomerase activity	2.95E-02
85	GO:0015299: solute:proton antiporter activity	2.95E-02
86	GO:0004872: receptor activity	3.10E-02
87	GO:0030170: pyridoxal phosphate binding	3.23E-02
88	GO:0004197: cysteine-type endopeptidase activity	3.41E-02
89	GO:0015385: sodium:proton antiporter activity	3.57E-02
90	GO:0016791: phosphatase activity	3.73E-02
91	GO:0004672: protein kinase activity	3.75E-02
92	GO:0015297: antiporter activity	3.83E-02
93	GO:0008483: transaminase activity	3.89E-02
94	GO:0016597: amino acid binding	4.06E-02
95	GO:0008194: UDP-glycosyltransferase activity	4.48E-02
96	GO:0008375: acetylglucosaminyltransferase activity	4.57E-02
97	GO:0102483: scopolin beta-glucosidase activity	4.75E-02
98	GO:0004721: phosphoprotein phosphatase activity	4.75E-02
99	GO:0005509: calcium ion binding	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0016021: integral component of membrane	4.18E-08
3	GO:0005886: plasma membrane	2.76E-07
4	GO:0000138: Golgi trans cisterna	3.24E-04
5	GO:0005794: Golgi apparatus	4.94E-04
6	GO:0005901: caveola	7.07E-04
7	GO:0070062: extracellular exosome	1.65E-03
8	GO:0000813: ESCRT I complex	2.82E-03
9	GO:0005887: integral component of plasma membrane	3.64E-03
10	GO:0005802: trans-Golgi network	4.11E-03
11	GO:0005777: peroxisome	7.42E-03
12	GO:0005789: endoplasmic reticulum membrane	1.48E-02
13	GO:0005769: early endosome	1.60E-02
14	GO:0005768: endosome	1.65E-02
15	GO:0070469: respiratory chain	1.84E-02
16	GO:0005770: late endosome	2.80E-02
17	GO:0005774: vacuolar membrane	2.91E-02
18	GO:0009504: cell plate	3.10E-02
19	GO:0031965: nuclear membrane	3.10E-02
20	GO:0000145: exocyst	3.41E-02