co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00240

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
2	GO:0006983: ER overload response	0.00E+00
3	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
4	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
5	GO:0032515: negative regulation of phosphoprotein phosphatase activity	0.00E+00
6	GO:0046865: terpenoid transport	0.00E+00
7	GO:0009306: protein secretion	7.97E-05
8	GO:0031930: mitochondria-nucleus signaling pathway	8.69E-05
9	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	8.69E-05
10	GO:0032469: endoplasmic reticulum calcium ion homeostasis	1.86E-04
11	GO:0032491: detection of molecule of fungal origin	1.86E-04
12	GO:0042539: hypotonic salinity response	1.86E-04
13	GO:0034975: protein folding in endoplasmic reticulum	1.86E-04
14	GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	1.86E-04
15	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.69E-04
16	GO:0043066: negative regulation of apoptotic process	4.19E-04
17	GO:0015012: heparan sulfate proteoglycan biosynthetic process	4.19E-04
18	GO:0080183: response to photooxidative stress	4.19E-04
19	GO:0010155: regulation of proton transport	4.19E-04
20	GO:0006024: glycosaminoglycan biosynthetic process	4.19E-04
21	GO:0002240: response to molecule of oomycetes origin	4.19E-04
22	GO:0002237: response to molecule of bacterial origin	5.38E-04
23	GO:0006470: protein dephosphorylation	6.33E-04
24	GO:0080168: abscisic acid transport	6.84E-04
25	GO:0015783: GDP-fucose transport	6.84E-04
26	GO:0015692: lead ion transport	6.84E-04
27	GO:0009863: salicylic acid mediated signaling pathway	7.41E-04
28	GO:0010731: protein glutathionylation	9.77E-04
29	GO:0071323: cellular response to chitin	9.77E-04
30	GO:0045088: regulation of innate immune response	1.29E-03
31	GO:0007112: male meiosis cytokinesis	1.29E-03
32	GO:0006396: RNA processing	1.61E-03
33	GO:0009229: thiamine diphosphate biosynthetic process	1.65E-03
34	GO:0009435: NAD biosynthetic process	1.65E-03
35	GO:0009247: glycolipid biosynthetic process	1.65E-03
36	GO:0009228: thiamine biosynthetic process	2.03E-03
37	GO:0033365: protein localization to organelle	2.03E-03
38	GO:0002238: response to molecule of fungal origin	2.03E-03
39	GO:0006904: vesicle docking involved in exocytosis	2.27E-03
40	GO:0045926: negative regulation of growth	2.43E-03
41	GO:0000911: cytokinesis by cell plate formation	2.43E-03
42	GO:0010044: response to aluminum ion	2.87E-03
43	GO:0009850: auxin metabolic process	3.32E-03
44	GO:0019375: galactolipid biosynthetic process	3.32E-03
45	GO:0031540: regulation of anthocyanin biosynthetic process	3.32E-03
46	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.32E-03
47	GO:1900150: regulation of defense response to fungus	3.32E-03
48	GO:0006499: N-terminal protein myristoylation	3.64E-03
49	GO:0010204: defense response signaling pathway, resistance gene-independent	3.80E-03
50	GO:0006972: hyperosmotic response	3.80E-03
51	GO:0045087: innate immune response	4.19E-03
52	GO:0010112: regulation of systemic acquired resistance	4.30E-03
53	GO:0015780: nucleotide-sugar transport	4.30E-03
54	GO:0007338: single fertilization	4.30E-03
55	GO:0008202: steroid metabolic process	4.82E-03
56	GO:0043067: regulation of programmed cell death	4.82E-03
57	GO:0009086: methionine biosynthetic process	4.82E-03
58	GO:0042742: defense response to bacterium	4.87E-03
59	GO:0009870: defense response signaling pathway, resistance gene-dependent	5.36E-03
60	GO:0043069: negative regulation of programmed cell death	5.36E-03
61	GO:0009738: abscisic acid-activated signaling pathway	5.67E-03
62	GO:0019684: photosynthesis, light reaction	5.92E-03
63	GO:0009089: lysine biosynthetic process via diaminopimelate	5.92E-03
64	GO:0000038: very long-chain fatty acid metabolic process	5.92E-03
65	GO:0000266: mitochondrial fission	6.51E-03
66	GO:0045037: protein import into chloroplast stroma	6.51E-03
67	GO:0006626: protein targeting to mitochondrion	7.11E-03
68	GO:0018107: peptidyl-threonine phosphorylation	7.11E-03
69	GO:0006486: protein glycosylation	7.26E-03
70	GO:0010200: response to chitin	7.39E-03
71	GO:0007034: vacuolar transport	7.73E-03
72	GO:0009266: response to temperature stimulus	7.73E-03
73	GO:0007030: Golgi organization	8.37E-03
74	GO:0009901: anther dehiscence	8.37E-03
75	GO:0009620: response to fungus	9.44E-03
76	GO:0045333: cellular respiration	9.71E-03
77	GO:0080147: root hair cell development	9.71E-03
78	GO:0000027: ribosomal large subunit assembly	9.71E-03
79	GO:0043622: cortical microtubule organization	1.04E-02
80	GO:0018105: peptidyl-serine phosphorylation	1.07E-02
81	GO:0048278: vesicle docking	1.11E-02
82	GO:0009751: response to salicylic acid	1.14E-02
83	GO:0006468: protein phosphorylation	1.17E-02
84	GO:0009814: defense response, incompatible interaction	1.19E-02
85	GO:0010584: pollen exine formation	1.34E-02
86	GO:0009845: seed germination	1.40E-02
87	GO:0006885: regulation of pH	1.58E-02
88	GO:0061025: membrane fusion	1.66E-02
89	GO:0009737: response to abscisic acid	1.81E-02
90	GO:0010193: response to ozone	1.83E-02
91	GO:0002229: defense response to oomycetes	1.83E-02
92	GO:0032502: developmental process	1.92E-02
93	GO:0007264: small GTPase mediated signal transduction	1.92E-02
94	GO:0030163: protein catabolic process	2.01E-02
95	GO:0007166: cell surface receptor signaling pathway	2.05E-02
96	GO:0006464: cellular protein modification process	2.10E-02
97	GO:0009567: double fertilization forming a zygote and endosperm	2.10E-02
98	GO:0008380: RNA splicing	2.14E-02
99	GO:0010029: regulation of seed germination	2.48E-02
100	GO:0035556: intracellular signal transduction	2.57E-02
101	GO:0006906: vesicle fusion	2.58E-02
102	GO:0010043: response to zinc ion	3.19E-02
103	GO:0009723: response to ethylene	3.22E-02
104	GO:0055085: transmembrane transport	3.23E-02
105	GO:0009867: jasmonic acid mediated signaling pathway	3.40E-02
106	GO:0009637: response to blue light	3.40E-02
107	GO:0016192: vesicle-mediated transport	3.62E-02
108	GO:0006952: defense response	3.63E-02
109	GO:0046777: protein autophosphorylation	3.68E-02
110	GO:0006887: exocytosis	3.85E-02
111	GO:0006897: endocytosis	3.85E-02
112	GO:0042542: response to hydrogen peroxide	3.96E-02
113	GO:0051707: response to other organism	4.08E-02
114	GO:0045454: cell redox homeostasis	4.12E-02
115	GO:0008643: carbohydrate transport	4.31E-02
116	GO:0006869: lipid transport	4.51E-02
117	GO:0006855: drug transmembrane transport	4.55E-02
118	GO:0000165: MAPK cascade	4.67E-02
119	GO:0006812: cation transport	4.79E-02
120	GO:0009846: pollen germination	4.79E-02
121	GO:0042538: hyperosmotic salinity response	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0050334: thiaminase activity	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
5	GO:0008734: L-aspartate oxidase activity	0.00E+00
6	GO:0004865: protein serine/threonine phosphatase inhibitor activity	0.00E+00
7	GO:0005212: structural constituent of eye lens	0.00E+00
8	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.86E-04
9	GO:0046481: digalactosyldiacylglycerol synthase activity	1.86E-04
10	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.86E-04
11	GO:0048531: beta-1,3-galactosyltransferase activity	4.19E-04
12	GO:0015036: disulfide oxidoreductase activity	4.19E-04
13	GO:0004722: protein serine/threonine phosphatase activity	4.19E-04
14	GO:0032934: sterol binding	4.19E-04
15	GO:0005457: GDP-fucose transmembrane transporter activity	6.84E-04
16	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	7.44E-04
17	GO:0035250: UDP-galactosyltransferase activity	9.77E-04
18	GO:0010178: IAA-amino acid conjugate hydrolase activity	9.77E-04
19	GO:0016301: kinase activity	1.13E-03
20	GO:0009916: alternative oxidase activity	1.29E-03
21	GO:0015035: protein disulfide oxidoreductase activity	1.61E-03
22	GO:0004040: amidase activity	1.65E-03
23	GO:0004656: procollagen-proline 4-dioxygenase activity	2.43E-03
24	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.43E-03
25	GO:0004525: ribonuclease III activity	3.32E-03
26	GO:0004708: MAP kinase kinase activity	3.32E-03
27	GO:0008142: oxysterol binding	3.80E-03
28	GO:0005524: ATP binding	4.19E-03
29	GO:0005509: calcium ion binding	4.23E-03
30	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.57E-03
31	GO:0004713: protein tyrosine kinase activity	5.36E-03
32	GO:0008559: xenobiotic-transporting ATPase activity	5.92E-03
33	GO:0046872: metal ion binding	6.55E-03
34	GO:0005262: calcium channel activity	7.11E-03
35	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.11E-03
36	GO:0008061: chitin binding	8.37E-03
37	GO:0031418: L-ascorbic acid binding	9.71E-03
38	GO:0051087: chaperone binding	1.04E-02
39	GO:0004707: MAP kinase activity	1.11E-02
40	GO:0005515: protein binding	1.31E-02
41	GO:0003756: protein disulfide isomerase activity	1.34E-02
42	GO:0005451: monovalent cation:proton antiporter activity	1.50E-02
43	GO:0015299: solute:proton antiporter activity	1.66E-02
44	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.67E-02
45	GO:0004872: receptor activity	1.75E-02
46	GO:0015385: sodium:proton antiporter activity	2.01E-02
47	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.01E-02
48	GO:0008237: metallopeptidase activity	2.19E-02
49	GO:0008483: transaminase activity	2.19E-02
50	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.19E-02
51	GO:0008375: acetylglucosaminyltransferase activity	2.58E-02
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.58E-02
53	GO:0004004: ATP-dependent RNA helicase activity	2.67E-02
54	GO:0004683: calmodulin-dependent protein kinase activity	2.67E-02
55	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.88E-02
56	GO:0004674: protein serine/threonine kinase activity	2.91E-02
57	GO:0016740: transferase activity	3.07E-02
58	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.40E-02
59	GO:0000149: SNARE binding	3.63E-02
60	GO:0005484: SNAP receptor activity	4.08E-02
61	GO:0051537: 2 iron, 2 sulfur cluster binding	4.31E-02

Rank	GO Term	Adjusted P value
1	GO:0031314: extrinsic component of mitochondrial inner membrane	4.19E-04
2	GO:0009898: cytoplasmic side of plasma membrane	1.29E-03
3	GO:0000164: protein phosphatase type 1 complex	1.65E-03
4	GO:0005783: endoplasmic reticulum	3.55E-03
5	GO:0000325: plant-type vacuole	3.82E-03
6	GO:0016021: integral component of membrane	4.10E-03
7	GO:0005886: plasma membrane	8.22E-03
8	GO:0030176: integral component of endoplasmic reticulum membrane	8.37E-03
9	GO:0005795: Golgi stack	8.37E-03
10	GO:0005789: endoplasmic reticulum membrane	1.02E-02
11	GO:0070469: respiratory chain	1.04E-02
12	GO:0005741: mitochondrial outer membrane	1.11E-02
13	GO:0009543: chloroplast thylakoid lumen	1.30E-02
14	GO:0005770: late endosome	1.58E-02
15	GO:0005737: cytoplasm	1.73E-02
16	GO:0009504: cell plate	1.75E-02
17	GO:0000145: exocyst	1.92E-02
18	GO:0071944: cell periphery	2.01E-02
19	GO:0009707: chloroplast outer membrane	2.88E-02
20	GO:0015934: large ribosomal subunit	3.19E-02
21	GO:0022625: cytosolic large ribosomal subunit	3.62E-02
22	GO:0031201: SNARE complex	3.85E-02
23	GO:0090406: pollen tube	4.08E-02
24	GO:0005743: mitochondrial inner membrane	4.71E-02