GO Enrichment Analysis of Co-expressed Genes with
AT4G00180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043087: regulation of GTPase activity | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 4 | GO:0010081: regulation of inflorescence meristem growth | 0.00E+00 |
| 5 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 6 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 7 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 4.09E-05 |
| 8 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.44E-04 |
| 9 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.44E-04 |
| 10 | GO:0000066: mitochondrial ornithine transport | 1.44E-04 |
| 11 | GO:0080065: 4-alpha-methyl-delta7-sterol oxidation | 1.44E-04 |
| 12 | GO:0010080: regulation of floral meristem growth | 1.44E-04 |
| 13 | GO:0010289: homogalacturonan biosynthetic process | 3.29E-04 |
| 14 | GO:0048255: mRNA stabilization | 3.29E-04 |
| 15 | GO:0006435: threonyl-tRNA aminoacylation | 3.29E-04 |
| 16 | GO:0006094: gluconeogenesis | 3.34E-04 |
| 17 | GO:0010207: photosystem II assembly | 3.77E-04 |
| 18 | GO:0006696: ergosterol biosynthetic process | 5.40E-04 |
| 19 | GO:0010022: meristem determinacy | 5.40E-04 |
| 20 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.40E-04 |
| 21 | GO:0010623: programmed cell death involved in cell development | 5.40E-04 |
| 22 | GO:0006730: one-carbon metabolic process | 6.89E-04 |
| 23 | GO:2001141: regulation of RNA biosynthetic process | 7.73E-04 |
| 24 | GO:0051639: actin filament network formation | 7.73E-04 |
| 25 | GO:1901332: negative regulation of lateral root development | 7.73E-04 |
| 26 | GO:0006096: glycolytic process | 7.84E-04 |
| 27 | GO:0016117: carotenoid biosynthetic process | 8.77E-04 |
| 28 | GO:0051781: positive regulation of cell division | 1.02E-03 |
| 29 | GO:0051764: actin crosslink formation | 1.02E-03 |
| 30 | GO:0051322: anaphase | 1.02E-03 |
| 31 | GO:0006661: phosphatidylinositol biosynthetic process | 1.02E-03 |
| 32 | GO:0006183: GTP biosynthetic process | 1.02E-03 |
| 33 | GO:0010508: positive regulation of autophagy | 1.02E-03 |
| 34 | GO:0010236: plastoquinone biosynthetic process | 1.29E-03 |
| 35 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.29E-03 |
| 36 | GO:0006555: methionine metabolic process | 1.59E-03 |
| 37 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.59E-03 |
| 38 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.24E-03 |
| 39 | GO:0045010: actin nucleation | 2.60E-03 |
| 40 | GO:0000105: histidine biosynthetic process | 2.60E-03 |
| 41 | GO:0048564: photosystem I assembly | 2.60E-03 |
| 42 | GO:0071482: cellular response to light stimulus | 2.96E-03 |
| 43 | GO:0022900: electron transport chain | 2.96E-03 |
| 44 | GO:0009657: plastid organization | 2.96E-03 |
| 45 | GO:0032544: plastid translation | 2.96E-03 |
| 46 | GO:0009793: embryo development ending in seed dormancy | 3.34E-03 |
| 47 | GO:0000373: Group II intron splicing | 3.35E-03 |
| 48 | GO:0006098: pentose-phosphate shunt | 3.35E-03 |
| 49 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.35E-03 |
| 50 | GO:0010206: photosystem II repair | 3.35E-03 |
| 51 | GO:0035999: tetrahydrofolate interconversion | 3.76E-03 |
| 52 | GO:0009086: methionine biosynthetic process | 3.76E-03 |
| 53 | GO:0042546: cell wall biogenesis | 3.90E-03 |
| 54 | GO:0006535: cysteine biosynthetic process from serine | 4.18E-03 |
| 55 | GO:0006415: translational termination | 4.61E-03 |
| 56 | GO:0006352: DNA-templated transcription, initiation | 4.61E-03 |
| 57 | GO:0045037: protein import into chloroplast stroma | 5.06E-03 |
| 58 | GO:0010582: floral meristem determinacy | 5.06E-03 |
| 59 | GO:0030036: actin cytoskeleton organization | 5.52E-03 |
| 60 | GO:0009767: photosynthetic electron transport chain | 5.52E-03 |
| 61 | GO:0090351: seedling development | 6.50E-03 |
| 62 | GO:0019344: cysteine biosynthetic process | 7.52E-03 |
| 63 | GO:0051017: actin filament bundle assembly | 7.52E-03 |
| 64 | GO:0006289: nucleotide-excision repair | 7.52E-03 |
| 65 | GO:0006825: copper ion transport | 8.06E-03 |
| 66 | GO:0006418: tRNA aminoacylation for protein translation | 8.06E-03 |
| 67 | GO:0048511: rhythmic process | 8.61E-03 |
| 68 | GO:0010431: seed maturation | 8.61E-03 |
| 69 | GO:0035428: hexose transmembrane transport | 9.17E-03 |
| 70 | GO:0009814: defense response, incompatible interaction | 9.17E-03 |
| 71 | GO:0010089: xylem development | 1.03E-02 |
| 72 | GO:0019722: calcium-mediated signaling | 1.03E-02 |
| 73 | GO:0048868: pollen tube development | 1.22E-02 |
| 74 | GO:0046323: glucose import | 1.22E-02 |
| 75 | GO:0010268: brassinosteroid homeostasis | 1.22E-02 |
| 76 | GO:0045489: pectin biosynthetic process | 1.22E-02 |
| 77 | GO:0045490: pectin catabolic process | 1.24E-02 |
| 78 | GO:0007059: chromosome segregation | 1.28E-02 |
| 79 | GO:0008654: phospholipid biosynthetic process | 1.35E-02 |
| 80 | GO:0016132: brassinosteroid biosynthetic process | 1.41E-02 |
| 81 | GO:0010583: response to cyclopentenone | 1.48E-02 |
| 82 | GO:0016032: viral process | 1.48E-02 |
| 83 | GO:0071281: cellular response to iron ion | 1.55E-02 |
| 84 | GO:0010090: trichome morphogenesis | 1.55E-02 |
| 85 | GO:0016125: sterol metabolic process | 1.62E-02 |
| 86 | GO:0007267: cell-cell signaling | 1.69E-02 |
| 87 | GO:0000910: cytokinesis | 1.76E-02 |
| 88 | GO:0016126: sterol biosynthetic process | 1.84E-02 |
| 89 | GO:0009911: positive regulation of flower development | 1.84E-02 |
| 90 | GO:0001666: response to hypoxia | 1.84E-02 |
| 91 | GO:0009658: chloroplast organization | 1.93E-02 |
| 92 | GO:0010411: xyloglucan metabolic process | 2.06E-02 |
| 93 | GO:0016311: dephosphorylation | 2.14E-02 |
| 94 | GO:0009817: defense response to fungus, incompatible interaction | 2.22E-02 |
| 95 | GO:0048481: plant ovule development | 2.22E-02 |
| 96 | GO:0018298: protein-chromophore linkage | 2.22E-02 |
| 97 | GO:0010311: lateral root formation | 2.30E-02 |
| 98 | GO:0080167: response to karrikin | 2.39E-02 |
| 99 | GO:0007568: aging | 2.46E-02 |
| 100 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.48E-02 |
| 101 | GO:0009637: response to blue light | 2.63E-02 |
| 102 | GO:0009853: photorespiration | 2.63E-02 |
| 103 | GO:0016051: carbohydrate biosynthetic process | 2.63E-02 |
| 104 | GO:0006839: mitochondrial transport | 2.88E-02 |
| 105 | GO:0010114: response to red light | 3.15E-02 |
| 106 | GO:0009965: leaf morphogenesis | 3.42E-02 |
| 107 | GO:0006629: lipid metabolic process | 3.53E-02 |
| 108 | GO:0071555: cell wall organization | 3.66E-02 |
| 109 | GO:0009664: plant-type cell wall organization | 3.70E-02 |
| 110 | GO:0006364: rRNA processing | 3.89E-02 |
| 111 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.98E-02 |
| 112 | GO:0006417: regulation of translation | 4.18E-02 |
| 113 | GO:0048316: seed development | 4.48E-02 |
| 114 | GO:0009873: ethylene-activated signaling pathway | 4.54E-02 |
| 115 | GO:0009620: response to fungus | 4.68E-02 |
| 116 | GO:0009734: auxin-activated signaling pathway | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 2 | GO:0010355: homogentisate farnesyltransferase activity | 0.00E+00 |
| 3 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 4 | GO:0005048: signal sequence binding | 0.00E+00 |
| 5 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 6 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0010356: homogentisate geranylgeranyltransferase activity | 0.00E+00 |
| 8 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 9 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 10 | GO:0010357: homogentisate solanesyltransferase activity | 0.00E+00 |
| 11 | GO:0004830: tryptophan-tRNA ligase activity | 1.44E-04 |
| 12 | GO:0003879: ATP phosphoribosyltransferase activity | 1.44E-04 |
| 13 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.44E-04 |
| 14 | GO:0005290: L-histidine transmembrane transporter activity | 1.44E-04 |
| 15 | GO:0004008: copper-exporting ATPase activity | 1.44E-04 |
| 16 | GO:0051996: squalene synthase activity | 1.44E-04 |
| 17 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.44E-04 |
| 18 | GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity | 1.44E-04 |
| 19 | GO:0050017: L-3-cyanoalanine synthase activity | 3.29E-04 |
| 20 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 3.29E-04 |
| 21 | GO:0003938: IMP dehydrogenase activity | 3.29E-04 |
| 22 | GO:0000064: L-ornithine transmembrane transporter activity | 3.29E-04 |
| 23 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.29E-04 |
| 24 | GO:0004829: threonine-tRNA ligase activity | 3.29E-04 |
| 25 | GO:0004802: transketolase activity | 3.29E-04 |
| 26 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 3.29E-04 |
| 27 | GO:0052692: raffinose alpha-galactosidase activity | 5.40E-04 |
| 28 | GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups | 5.40E-04 |
| 29 | GO:0003913: DNA photolyase activity | 5.40E-04 |
| 30 | GO:0004557: alpha-galactosidase activity | 5.40E-04 |
| 31 | GO:0030570: pectate lyase activity | 7.50E-04 |
| 32 | GO:0015189: L-lysine transmembrane transporter activity | 7.73E-04 |
| 33 | GO:0000254: C-4 methylsterol oxidase activity | 7.73E-04 |
| 34 | GO:0015181: arginine transmembrane transporter activity | 7.73E-04 |
| 35 | GO:0016149: translation release factor activity, codon specific | 7.73E-04 |
| 36 | GO:0001053: plastid sigma factor activity | 1.02E-03 |
| 37 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.02E-03 |
| 38 | GO:0016987: sigma factor activity | 1.02E-03 |
| 39 | GO:0070628: proteasome binding | 1.02E-03 |
| 40 | GO:0005471: ATP:ADP antiporter activity | 1.29E-03 |
| 41 | GO:0004518: nuclease activity | 1.32E-03 |
| 42 | GO:0004332: fructose-bisphosphate aldolase activity | 1.59E-03 |
| 43 | GO:0031593: polyubiquitin binding | 1.59E-03 |
| 44 | GO:0004124: cysteine synthase activity | 1.91E-03 |
| 45 | GO:0004017: adenylate kinase activity | 1.91E-03 |
| 46 | GO:0009881: photoreceptor activity | 2.24E-03 |
| 47 | GO:0005096: GTPase activator activity | 2.43E-03 |
| 48 | GO:0008312: 7S RNA binding | 2.60E-03 |
| 49 | GO:0043022: ribosome binding | 2.60E-03 |
| 50 | GO:0005375: copper ion transmembrane transporter activity | 2.96E-03 |
| 51 | GO:0003747: translation release factor activity | 3.35E-03 |
| 52 | GO:0030955: potassium ion binding | 3.76E-03 |
| 53 | GO:0004743: pyruvate kinase activity | 3.76E-03 |
| 54 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.06E-03 |
| 55 | GO:0035091: phosphatidylinositol binding | 4.06E-03 |
| 56 | GO:0004161: dimethylallyltranstransferase activity | 4.61E-03 |
| 57 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.52E-03 |
| 58 | GO:0008081: phosphoric diester hydrolase activity | 5.52E-03 |
| 59 | GO:0043130: ubiquitin binding | 7.52E-03 |
| 60 | GO:0005528: FK506 binding | 7.52E-03 |
| 61 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 9.17E-03 |
| 62 | GO:0016829: lyase activity | 9.73E-03 |
| 63 | GO:0004812: aminoacyl-tRNA ligase activity | 1.09E-02 |
| 64 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.16E-02 |
| 65 | GO:0010181: FMN binding | 1.28E-02 |
| 66 | GO:0005355: glucose transmembrane transporter activity | 1.28E-02 |
| 67 | GO:0019901: protein kinase binding | 1.35E-02 |
| 68 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.41E-02 |
| 69 | GO:0051015: actin filament binding | 1.55E-02 |
| 70 | GO:0003684: damaged DNA binding | 1.62E-02 |
| 71 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.69E-02 |
| 72 | GO:0000287: magnesium ion binding | 1.89E-02 |
| 73 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.06E-02 |
| 74 | GO:0008236: serine-type peptidase activity | 2.14E-02 |
| 75 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.15E-02 |
| 76 | GO:0005525: GTP binding | 2.83E-02 |
| 77 | GO:0004871: signal transducer activity | 3.00E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 3.15E-02 |
| 79 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.51E-02 |
| 80 | GO:0003924: GTPase activity | 3.53E-02 |
| 81 | GO:0005506: iron ion binding | 3.59E-02 |
| 82 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.89E-02 |
| 83 | GO:0046872: metal ion binding | 3.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 7.76E-11 |
| 2 | GO:0009570: chloroplast stroma | 4.94E-06 |
| 3 | GO:0009574: preprophase band | 1.01E-05 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 5.16E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 3.29E-04 |
| 6 | GO:0032432: actin filament bundle | 7.73E-04 |
| 7 | GO:0031209: SCAR complex | 1.59E-03 |
| 8 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 2.96E-03 |
| 9 | GO:0031977: thylakoid lumen | 3.46E-03 |
| 10 | GO:0009536: plastid | 3.66E-03 |
| 11 | GO:0009505: plant-type cell wall | 3.80E-03 |
| 12 | GO:0031969: chloroplast membrane | 4.45E-03 |
| 13 | GO:0009579: thylakoid | 4.48E-03 |
| 14 | GO:0005884: actin filament | 4.61E-03 |
| 15 | GO:0000311: plastid large ribosomal subunit | 5.06E-03 |
| 16 | GO:0005578: proteinaceous extracellular matrix | 5.52E-03 |
| 17 | GO:0031225: anchored component of membrane | 6.71E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 8.99E-03 |
| 19 | GO:0046658: anchored component of plasma membrane | 1.65E-02 |
| 20 | GO:0030529: intracellular ribonucleoprotein complex | 1.84E-02 |
| 21 | GO:0019005: SCF ubiquitin ligase complex | 2.22E-02 |
| 22 | GO:0015934: large ribosomal subunit | 2.46E-02 |
| 23 | GO:0009941: chloroplast envelope | 3.67E-02 |
| 24 | GO:0005840: ribosome | 3.88E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 4.99E-02 |