co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G66654

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2001143: N-methylnicotinate transport	0.00E+00
2	GO:0070212: protein poly-ADP-ribosylation	0.00E+00
3	GO:2001142: nicotinate transport	0.00E+00
4	GO:0034975: protein folding in endoplasmic reticulum	2.08E-05
5	GO:0048482: plant ovule morphogenesis	2.08E-05
6	GO:0019673: GDP-mannose metabolic process	2.08E-05
7	GO:0007584: response to nutrient	5.37E-05
8	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	9.50E-05
9	GO:0046621: negative regulation of organ growth	9.50E-05
10	GO:0010581: regulation of starch biosynthetic process	9.50E-05
11	GO:0002230: positive regulation of defense response to virus by host	9.50E-05
12	GO:0015696: ammonium transport	1.42E-04
13	GO:0000187: activation of MAPK activity	1.42E-04
14	GO:0010107: potassium ion import	1.95E-04
15	GO:2000038: regulation of stomatal complex development	1.95E-04
16	GO:0072488: ammonium transmembrane transport	1.95E-04
17	GO:0006465: signal peptide processing	2.51E-04
18	GO:1900425: negative regulation of defense response to bacterium	3.11E-04
19	GO:0048317: seed morphogenesis	3.11E-04
20	GO:2000037: regulation of stomatal complex patterning	3.73E-04
21	GO:1900056: negative regulation of leaf senescence	4.37E-04
22	GO:0032875: regulation of DNA endoreduplication	5.05E-04
23	GO:1900150: regulation of defense response to fungus	5.05E-04
24	GO:0009626: plant-type hypersensitive response	5.49E-04
25	GO:0048193: Golgi vesicle transport	5.74E-04
26	GO:0035556: intracellular signal transduction	6.66E-04
27	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.94E-04
28	GO:0043069: negative regulation of programmed cell death	7.94E-04
29	GO:0010229: inflorescence development	1.03E-03
30	GO:0006446: regulation of translational initiation	1.11E-03
31	GO:0002237: response to molecule of bacterial origin	1.11E-03
32	GO:0010053: root epidermal cell differentiation	1.20E-03
33	GO:0009814: defense response, incompatible interaction	1.66E-03
34	GO:0010227: floral organ abscission	1.76E-03
35	GO:0000271: polysaccharide biosynthetic process	2.07E-03
36	GO:0010118: stomatal movement	2.07E-03
37	GO:0045489: pectin biosynthetic process	2.17E-03
38	GO:0006891: intra-Golgi vesicle-mediated transport	2.50E-03
39	GO:0010193: response to ozone	2.50E-03
40	GO:0016032: viral process	2.61E-03
41	GO:0006952: defense response	2.76E-03
42	GO:0009751: response to salicylic acid	2.81E-03
43	GO:0006464: cellular protein modification process	2.85E-03
44	GO:0051607: defense response to virus	3.08E-03
45	GO:0000910: cytokinesis	3.08E-03
46	GO:0009615: response to virus	3.21E-03
47	GO:0016051: carbohydrate biosynthetic process	4.51E-03
48	GO:0006468: protein phosphorylation	4.57E-03
49	GO:0006897: endocytosis	5.07E-03
50	GO:0006855: drug transmembrane transport	5.97E-03
51	GO:0000165: MAPK cascade	6.12E-03
52	GO:0031347: regulation of defense response	6.12E-03
53	GO:0009651: response to salt stress	6.85E-03
54	GO:0009624: response to nematode	8.42E-03
55	GO:0009414: response to water deprivation	9.91E-03
56	GO:0006979: response to oxidative stress	1.02E-02
57	GO:0006413: translational initiation	1.18E-02
58	GO:0015031: protein transport	1.29E-02
59	GO:0009739: response to gibberellin	1.34E-02
60	GO:0009826: unidimensional cell growth	1.64E-02
61	GO:0006970: response to osmotic stress	1.77E-02
62	GO:0009723: response to ethylene	1.87E-02
63	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.01E-02
64	GO:0009737: response to abscisic acid	2.17E-02
65	GO:0045454: cell redox homeostasis	2.23E-02
66	GO:0006886: intracellular protein transport	2.28E-02
67	GO:0009753: response to jasmonic acid	2.72E-02
68	GO:0006508: proteolysis	3.13E-02
69	GO:0006357: regulation of transcription from RNA polymerase II promoter	3.16E-02
70	GO:0055085: transmembrane transport	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0090417: N-methylnicotinate transporter activity	0.00E+00
2	GO:0090416: nicotinate transporter activity	0.00E+00
3	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.08E-05
4	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.08E-05
5	GO:0008446: GDP-mannose 4,6-dehydratase activity	2.08E-05
6	GO:0080041: ADP-ribose pyrophosphohydrolase activity	5.37E-05
7	GO:0017110: nucleoside-diphosphatase activity	5.37E-05
8	GO:0047631: ADP-ribose diphosphatase activity	2.51E-04
9	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.77E-04
10	GO:0000210: NAD+ diphosphatase activity	3.11E-04
11	GO:0008519: ammonium transmembrane transporter activity	3.11E-04
12	GO:0004708: MAP kinase kinase activity	5.05E-04
13	GO:0005267: potassium channel activity	5.74E-04
14	GO:0015035: protein disulfide oxidoreductase activity	6.36E-04
15	GO:0004713: protein tyrosine kinase activity	7.94E-04
16	GO:0005543: phospholipid binding	8.71E-04
17	GO:0016301: kinase activity	9.82E-04
18	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.11E-03
19	GO:0004175: endopeptidase activity	1.11E-03
20	GO:0005525: GTP binding	1.15E-03
21	GO:0043130: ubiquitin binding	1.38E-03
22	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.66E-03
23	GO:0022891: substrate-specific transmembrane transporter activity	1.76E-03
24	GO:0003756: protein disulfide isomerase activity	1.86E-03
25	GO:0003713: transcription coactivator activity	2.17E-03
26	GO:0008536: Ran GTPase binding	2.17E-03
27	GO:0004871: signal transducer activity	2.43E-03
28	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.73E-03
29	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.96E-03
30	GO:0008236: serine-type peptidase activity	3.71E-03
31	GO:0015238: drug transmembrane transporter activity	3.97E-03
32	GO:0005515: protein binding	5.21E-03
33	GO:0035091: phosphatidylinositol binding	5.66E-03
34	GO:0051287: NAD binding	6.12E-03
35	GO:0008234: cysteine-type peptidase activity	7.07E-03
36	GO:0022857: transmembrane transporter activity	8.07E-03
37	GO:0016758: transferase activity, transferring hexosyl groups	9.67E-03
38	GO:0044212: transcription regulatory region DNA binding	1.01E-02
39	GO:0015144: carbohydrate transmembrane transporter activity	1.12E-02
40	GO:0008565: protein transporter activity	1.12E-02
41	GO:0004674: protein serine/threonine kinase activity	1.12E-02
42	GO:0043565: sequence-specific DNA binding	1.17E-02
43	GO:0015297: antiporter activity	1.20E-02
44	GO:0005351: sugar:proton symporter activity	1.22E-02
45	GO:0003743: translation initiation factor activity	1.38E-02
46	GO:0004672: protein kinase activity	1.49E-02
47	GO:0003682: chromatin binding	1.75E-02
48	GO:0008233: peptidase activity	1.94E-02
49	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	2.23E-02
50	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	2.41E-02
51	GO:0003924: GTPase activity	2.59E-02
52	GO:0009055: electron carrier activity	2.72E-02
53	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005795: Golgi stack	1.20E-03
2	GO:0005905: clathrin-coated pit	1.56E-03
3	GO:0030136: clathrin-coated vesicle	1.96E-03
4	GO:0009504: cell plate	2.39E-03
5	GO:0005886: plasma membrane	7.35E-03
6	GO:0010008: endosome membrane	7.57E-03
7	GO:0012505: endomembrane system	8.25E-03
8	GO:0046658: anchored component of plasma membrane	1.51E-02
9	GO:0005794: Golgi apparatus	1.63E-02
10	GO:0005634: nucleus	2.44E-02
11	GO:0016021: integral component of membrane	3.17E-02
12	GO:0005829: cytosol	3.38E-02
13	GO:0005737: cytoplasm	3.41E-02
14	GO:0009534: chloroplast thylakoid	4.46E-02