GO Enrichment Analysis of Co-expressed Genes with
AT3G63510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042352: GDP-L-fucose salvage | 0.00E+00 |
| 2 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 3 | GO:0042793: transcription from plastid promoter | 1.59E-05 |
| 4 | GO:0005980: glycogen catabolic process | 8.09E-05 |
| 5 | GO:0009640: photomorphogenesis | 1.53E-04 |
| 6 | GO:0071452: cellular response to singlet oxygen | 1.93E-04 |
| 7 | GO:0018026: peptidyl-lysine monomethylation | 1.93E-04 |
| 8 | GO:0006508: proteolysis | 3.06E-04 |
| 9 | GO:0030261: chromosome condensation | 3.24E-04 |
| 10 | GO:0009647: skotomorphogenesis | 4.66E-04 |
| 11 | GO:0046739: transport of virus in multicellular host | 4.66E-04 |
| 12 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.92E-04 |
| 13 | GO:0048497: maintenance of floral organ identity | 7.86E-04 |
| 14 | GO:0010027: thylakoid membrane organization | 8.44E-04 |
| 15 | GO:0009658: chloroplast organization | 1.26E-03 |
| 16 | GO:0005978: glycogen biosynthetic process | 1.54E-03 |
| 17 | GO:0009642: response to light intensity | 1.54E-03 |
| 18 | GO:0042255: ribosome assembly | 1.54E-03 |
| 19 | GO:0006353: DNA-templated transcription, termination | 1.54E-03 |
| 20 | GO:0006631: fatty acid metabolic process | 1.61E-03 |
| 21 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.76E-03 |
| 22 | GO:0010206: photosystem II repair | 1.98E-03 |
| 23 | GO:1900865: chloroplast RNA modification | 2.22E-03 |
| 24 | GO:0045036: protein targeting to chloroplast | 2.46E-03 |
| 25 | GO:0006949: syncytium formation | 2.46E-03 |
| 26 | GO:0051026: chiasma assembly | 2.46E-03 |
| 27 | GO:0016042: lipid catabolic process | 2.61E-03 |
| 28 | GO:0009793: embryo development ending in seed dormancy | 2.79E-03 |
| 29 | GO:0012501: programmed cell death | 2.97E-03 |
| 30 | GO:0009740: gibberellic acid mediated signaling pathway | 3.12E-03 |
| 31 | GO:2000012: regulation of auxin polar transport | 3.24E-03 |
| 32 | GO:0009266: response to temperature stimulus | 3.52E-03 |
| 33 | GO:0010020: chloroplast fission | 3.52E-03 |
| 34 | GO:0007034: vacuolar transport | 3.52E-03 |
| 35 | GO:0080188: RNA-directed DNA methylation | 3.81E-03 |
| 36 | GO:0090351: seedling development | 3.81E-03 |
| 37 | GO:0080147: root hair cell development | 4.40E-03 |
| 38 | GO:0019953: sexual reproduction | 4.70E-03 |
| 39 | GO:0007017: microtubule-based process | 4.70E-03 |
| 40 | GO:0006633: fatty acid biosynthetic process | 5.18E-03 |
| 41 | GO:0040008: regulation of growth | 5.43E-03 |
| 42 | GO:0010091: trichome branching | 6.01E-03 |
| 43 | GO:0008380: RNA splicing | 6.78E-03 |
| 44 | GO:0009741: response to brassinosteroid | 7.06E-03 |
| 45 | GO:0009791: post-embryonic development | 7.79E-03 |
| 46 | GO:0019252: starch biosynthetic process | 7.79E-03 |
| 47 | GO:0071554: cell wall organization or biogenesis | 8.17E-03 |
| 48 | GO:0009826: unidimensional cell growth | 8.47E-03 |
| 49 | GO:0010583: response to cyclopentenone | 8.56E-03 |
| 50 | GO:0030163: protein catabolic process | 8.94E-03 |
| 51 | GO:0009828: plant-type cell wall loosening | 9.34E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 1.19E-02 |
| 53 | GO:0000160: phosphorelay signal transduction system | 1.32E-02 |
| 54 | GO:0009813: flavonoid biosynthetic process | 1.32E-02 |
| 55 | GO:0006839: mitochondrial transport | 1.65E-02 |
| 56 | GO:0048364: root development | 1.69E-02 |
| 57 | GO:0006897: endocytosis | 1.70E-02 |
| 58 | GO:0009664: plant-type cell wall organization | 2.12E-02 |
| 59 | GO:0009736: cytokinin-activated signaling pathway | 2.23E-02 |
| 60 | GO:0048367: shoot system development | 2.57E-02 |
| 61 | GO:0009620: response to fungus | 2.69E-02 |
| 62 | GO:0009742: brassinosteroid mediated signaling pathway | 2.99E-02 |
| 63 | GO:0009058: biosynthetic process | 3.49E-02 |
| 64 | GO:0009790: embryo development | 3.76E-02 |
| 65 | GO:0006413: translational initiation | 4.02E-02 |
| 66 | GO:0010468: regulation of gene expression | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047341: fucose-1-phosphate guanylyltransferase activity | 0.00E+00 |
| 2 | GO:0050201: fucokinase activity | 0.00E+00 |
| 3 | GO:0047661: amino-acid racemase activity | 0.00E+00 |
| 4 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 5 | GO:0004176: ATP-dependent peptidase activity | 8.34E-06 |
| 6 | GO:0008237: metallopeptidase activity | 4.13E-05 |
| 7 | GO:0008184: glycogen phosphorylase activity | 8.09E-05 |
| 8 | GO:0004645: phosphorylase activity | 8.09E-05 |
| 9 | GO:0009374: biotin binding | 8.09E-05 |
| 10 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.93E-04 |
| 11 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.93E-04 |
| 12 | GO:0016630: protochlorophyllide reductase activity | 1.93E-04 |
| 13 | GO:0070180: large ribosomal subunit rRNA binding | 3.24E-04 |
| 14 | GO:0070330: aromatase activity | 3.24E-04 |
| 15 | GO:0043169: cation binding | 3.24E-04 |
| 16 | GO:0005504: fatty acid binding | 3.24E-04 |
| 17 | GO:0004335: galactokinase activity | 6.21E-04 |
| 18 | GO:0016279: protein-lysine N-methyltransferase activity | 6.21E-04 |
| 19 | GO:0045430: chalcone isomerase activity | 6.21E-04 |
| 20 | GO:0003989: acetyl-CoA carboxylase activity | 7.86E-04 |
| 21 | GO:0018685: alkane 1-monooxygenase activity | 7.86E-04 |
| 22 | GO:0004556: alpha-amylase activity | 9.59E-04 |
| 23 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.71E-03 |
| 24 | GO:0004386: helicase activity | 3.60E-03 |
| 25 | GO:0004190: aspartic-type endopeptidase activity | 3.81E-03 |
| 26 | GO:0008408: 3'-5' exonuclease activity | 5.02E-03 |
| 27 | GO:0003727: single-stranded RNA binding | 6.01E-03 |
| 28 | GO:0004527: exonuclease activity | 7.06E-03 |
| 29 | GO:0051015: actin filament binding | 8.94E-03 |
| 30 | GO:0000156: phosphorelay response regulator activity | 8.94E-03 |
| 31 | GO:0016413: O-acetyltransferase activity | 1.02E-02 |
| 32 | GO:0008233: peptidase activity | 1.07E-02 |
| 33 | GO:0052689: carboxylic ester hydrolase activity | 1.21E-02 |
| 34 | GO:0008236: serine-type peptidase activity | 1.23E-02 |
| 35 | GO:0004222: metalloendopeptidase activity | 1.37E-02 |
| 36 | GO:0043621: protein self-association | 1.91E-02 |
| 37 | GO:0035091: phosphatidylinositol binding | 1.91E-02 |
| 38 | GO:0005198: structural molecule activity | 1.96E-02 |
| 39 | GO:0016298: lipase activity | 2.29E-02 |
| 40 | GO:0003690: double-stranded DNA binding | 2.29E-02 |
| 41 | GO:0016887: ATPase activity | 2.51E-02 |
| 42 | GO:0004650: polygalacturonase activity | 2.69E-02 |
| 43 | GO:0019843: rRNA binding | 3.36E-02 |
| 44 | GO:0016829: lyase activity | 3.56E-02 |
| 45 | GO:0004252: serine-type endopeptidase activity | 3.62E-02 |
| 46 | GO:0030170: pyridoxal phosphate binding | 3.62E-02 |
| 47 | GO:0003743: translation initiation factor activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.58E-07 |
| 2 | GO:0009534: chloroplast thylakoid | 3.17E-05 |
| 3 | GO:0009507: chloroplast | 3.53E-05 |
| 4 | GO:0000796: condensin complex | 8.09E-05 |
| 5 | GO:0009508: plastid chromosome | 1.49E-04 |
| 6 | GO:0009536: plastid | 1.84E-04 |
| 7 | GO:0009941: chloroplast envelope | 2.07E-04 |
| 8 | GO:0009317: acetyl-CoA carboxylase complex | 3.24E-04 |
| 9 | GO:0042646: plastid nucleoid | 4.66E-04 |
| 10 | GO:0030286: dynein complex | 6.21E-04 |
| 11 | GO:0009295: nucleoid | 7.56E-04 |
| 12 | GO:0000815: ESCRT III complex | 1.14E-03 |
| 13 | GO:0005762: mitochondrial large ribosomal subunit | 1.14E-03 |
| 14 | GO:0005655: nucleolar ribonuclease P complex | 1.14E-03 |
| 15 | GO:0009501: amyloplast | 1.54E-03 |
| 16 | GO:0009570: chloroplast stroma | 1.65E-03 |
| 17 | GO:0042644: chloroplast nucleoid | 1.98E-03 |
| 18 | GO:0005884: actin filament | 2.71E-03 |
| 19 | GO:0090404: pollen tube tip | 2.71E-03 |
| 20 | GO:0009506: plasmodesma | 7.58E-03 |
| 21 | GO:0005622: intracellular | 1.16E-02 |
| 22 | GO:0031977: thylakoid lumen | 1.70E-02 |
| 23 | GO:0005856: cytoskeleton | 1.96E-02 |
| 24 | GO:0009543: chloroplast thylakoid lumen | 3.36E-02 |
| 25 | GO:0005623: cell | 3.43E-02 |
| 26 | GO:0005576: extracellular region | 4.66E-02 |