co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G63010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0052386: cell wall thickening	0.00E+00
3	GO:0043619: regulation of transcription from RNA polymerase II promoter in response to oxidative stress	0.00E+00
4	GO:0018063: cytochrome c-heme linkage	0.00E+00
5	GO:0051553: flavone biosynthetic process	0.00E+00
6	GO:2000068: regulation of defense response to insect	0.00E+00
7	GO:0072722: response to amitrole	0.00E+00
8	GO:0010055: atrichoblast differentiation	0.00E+00
9	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
10	GO:0051607: defense response to virus	3.83E-05
11	GO:0009620: response to fungus	5.14E-05
12	GO:0009759: indole glucosinolate biosynthetic process	1.13E-04
13	GO:0051707: response to other organism	1.74E-04
14	GO:0006605: protein targeting	2.58E-04
15	GO:0006102: isocitrate metabolic process	2.58E-04
16	GO:1990641: response to iron ion starvation	2.70E-04
17	GO:0019567: arabinose biosynthetic process	2.70E-04
18	GO:0034214: protein hexamerization	2.70E-04
19	GO:0046246: terpene biosynthetic process	2.70E-04
20	GO:0019478: D-amino acid catabolic process	2.70E-04
21	GO:0051090: regulation of sequence-specific DNA binding transcription factor activity	2.70E-04
22	GO:0006680: glucosylceramide catabolic process	2.70E-04
23	GO:0032107: regulation of response to nutrient levels	2.70E-04
24	GO:0009617: response to bacterium	2.81E-04
25	GO:0010112: regulation of systemic acquired resistance	3.84E-04
26	GO:0008202: steroid metabolic process	4.56E-04
27	GO:0009816: defense response to bacterium, incompatible interaction	5.53E-04
28	GO:0015031: protein transport	5.87E-04
29	GO:0006101: citrate metabolic process	5.94E-04
30	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.94E-04
31	GO:0051252: regulation of RNA metabolic process	5.94E-04
32	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.94E-04
33	GO:0006568: tryptophan metabolic process	5.94E-04
34	GO:0010102: lateral root morphogenesis	7.96E-04
35	GO:0010272: response to silver ion	9.62E-04
36	GO:0006556: S-adenosylmethionine biosynthetic process	9.62E-04
37	GO:0080163: regulation of protein serine/threonine phosphatase activity	9.62E-04
38	GO:0061158: 3'-UTR-mediated mRNA destabilization	9.62E-04
39	GO:0071398: cellular response to fatty acid	9.62E-04
40	GO:0032504: multicellular organism reproduction	9.62E-04
41	GO:0009410: response to xenobiotic stimulus	9.62E-04
42	GO:0009611: response to wounding	9.88E-04
43	GO:0006099: tricarboxylic acid cycle	1.02E-03
44	GO:0000162: tryptophan biosynthetic process	1.11E-03
45	GO:0042742: defense response to bacterium	1.13E-03
46	GO:0010150: leaf senescence	1.15E-03
47	GO:0006631: fatty acid metabolic process	1.20E-03
48	GO:0070301: cellular response to hydrogen peroxide	1.38E-03
49	GO:0002239: response to oomycetes	1.38E-03
50	GO:0009963: positive regulation of flavonoid biosynthetic process	1.38E-03
51	GO:0071323: cellular response to chitin	1.38E-03
52	GO:0080024: indolebutyric acid metabolic process	1.38E-03
53	GO:0001676: long-chain fatty acid metabolic process	1.38E-03
54	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.38E-03
55	GO:0016998: cell wall macromolecule catabolic process	1.48E-03
56	GO:0009636: response to toxic substance	1.54E-03
57	GO:0009693: ethylene biosynthetic process	1.76E-03
58	GO:0048830: adventitious root development	1.84E-03
59	GO:1902584: positive regulation of response to water deprivation	1.84E-03
60	GO:0006621: protein retention in ER lumen	1.84E-03
61	GO:0033356: UDP-L-arabinose metabolic process	1.84E-03
62	GO:1901002: positive regulation of response to salt stress	1.84E-03
63	GO:0015867: ATP transport	1.84E-03
64	GO:0010188: response to microbial phytotoxin	1.84E-03
65	GO:0045927: positive regulation of growth	2.35E-03
66	GO:0006564: L-serine biosynthetic process	2.35E-03
67	GO:0006097: glyoxylate cycle	2.35E-03
68	GO:0009229: thiamine diphosphate biosynthetic process	2.35E-03
69	GO:0006623: protein targeting to vacuole	2.79E-03
70	GO:0009228: thiamine biosynthetic process	2.90E-03
71	GO:0015866: ADP transport	2.90E-03
72	GO:0010256: endomembrane system organization	2.90E-03
73	GO:0010193: response to ozone	2.98E-03
74	GO:0030643: cellular phosphate ion homeostasis	3.49E-03
75	GO:0034389: lipid particle organization	3.49E-03
76	GO:0080113: regulation of seed growth	3.49E-03
77	GO:0080186: developmental vegetative growth	4.12E-03
78	GO:0071669: plant-type cell wall organization or biogenesis	4.12E-03
79	GO:0050829: defense response to Gram-negative bacterium	4.12E-03
80	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	4.12E-03
81	GO:1902074: response to salt	4.12E-03
82	GO:0010044: response to aluminum ion	4.12E-03
83	GO:0006886: intracellular protein transport	4.28E-03
84	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.77E-03
85	GO:0009819: drought recovery	4.77E-03
86	GO:0009627: systemic acquired resistance	4.80E-03
87	GO:0016311: dephosphorylation	5.33E-03
88	GO:0010417: glucuronoxylan biosynthetic process	5.47E-03
89	GO:0010204: defense response signaling pathway, resistance gene-independent	5.47E-03
90	GO:0030968: endoplasmic reticulum unfolded protein response	5.47E-03
91	GO:0017004: cytochrome complex assembly	5.47E-03
92	GO:0009817: defense response to fungus, incompatible interaction	5.61E-03
93	GO:0055114: oxidation-reduction process	5.76E-03
94	GO:0007338: single fertilization	6.20E-03
95	GO:0015780: nucleotide-sugar transport	6.20E-03
96	GO:0009835: fruit ripening	6.20E-03
97	GO:0008152: metabolic process	6.51E-03
98	GO:0010629: negative regulation of gene expression	7.75E-03
99	GO:0019538: protein metabolic process	7.75E-03
100	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.75E-03
101	GO:0006032: chitin catabolic process	7.75E-03
102	GO:0009641: shade avoidance	7.75E-03
103	GO:0009682: induced systemic resistance	8.58E-03
104	GO:0052544: defense response by callose deposition in cell wall	8.58E-03
105	GO:0006415: translational termination	8.58E-03
106	GO:0000272: polysaccharide catabolic process	8.58E-03
107	GO:0009684: indoleacetic acid biosynthetic process	8.58E-03
108	GO:0042542: response to hydrogen peroxide	8.81E-03
109	GO:0046686: response to cadmium ion	9.08E-03
110	GO:0071365: cellular response to auxin stimulus	9.44E-03
111	GO:0006970: response to osmotic stress	1.17E-02
112	GO:0090351: seedling development	1.22E-02
113	GO:0006979: response to oxidative stress	1.26E-02
114	GO:0034976: response to endoplasmic reticulum stress	1.32E-02
115	GO:0009863: salicylic acid mediated signaling pathway	1.42E-02
116	GO:0051302: regulation of cell division	1.52E-02
117	GO:0006874: cellular calcium ion homeostasis	1.52E-02
118	GO:0010073: meristem maintenance	1.52E-02
119	GO:0019915: lipid storage	1.62E-02
120	GO:0009269: response to desiccation	1.62E-02
121	GO:0016114: terpenoid biosynthetic process	1.62E-02
122	GO:0030245: cellulose catabolic process	1.73E-02
123	GO:0009814: defense response, incompatible interaction	1.73E-02
124	GO:0016226: iron-sulfur cluster assembly	1.73E-02
125	GO:0006730: one-carbon metabolic process	1.73E-02
126	GO:0030433: ubiquitin-dependent ERAD pathway	1.73E-02
127	GO:0031348: negative regulation of defense response	1.73E-02
128	GO:0071456: cellular response to hypoxia	1.73E-02
129	GO:0010227: floral organ abscission	1.84E-02
130	GO:0006869: lipid transport	1.97E-02
131	GO:0010051: xylem and phloem pattern formation	2.19E-02
132	GO:0009751: response to salicylic acid	2.24E-02
133	GO:0045489: pectin biosynthetic process	2.31E-02
134	GO:0006520: cellular amino acid metabolic process	2.31E-02
135	GO:0006662: glycerol ether metabolic process	2.31E-02
136	GO:0046323: glucose import	2.31E-02
137	GO:0048544: recognition of pollen	2.43E-02
138	GO:0071554: cell wall organization or biogenesis	2.68E-02
139	GO:0002229: defense response to oomycetes	2.68E-02
140	GO:0000302: response to reactive oxygen species	2.68E-02
141	GO:0006891: intra-Golgi vesicle-mediated transport	2.68E-02
142	GO:0006635: fatty acid beta-oxidation	2.68E-02
143	GO:0016032: viral process	2.81E-02
144	GO:0040008: regulation of growth	2.92E-02
145	GO:0071281: cellular response to iron ion	2.94E-02
146	GO:0045490: pectin catabolic process	3.06E-02
147	GO:0009567: double fertilization forming a zygote and endosperm	3.07E-02
148	GO:0019760: glucosinolate metabolic process	3.07E-02
149	GO:0006464: cellular protein modification process	3.07E-02
150	GO:0009615: response to virus	3.48E-02
151	GO:0009607: response to biotic stimulus	3.63E-02
152	GO:0006906: vesicle fusion	3.77E-02
153	GO:0009651: response to salt stress	3.87E-02
154	GO:0007275: multicellular organism development	3.88E-02
155	GO:0030244: cellulose biosynthetic process	4.21E-02
156	GO:0008219: cell death	4.21E-02
157	GO:0009813: flavonoid biosynthetic process	4.36E-02
158	GO:0010311: lateral root formation	4.36E-02
159	GO:0009832: plant-type cell wall biogenesis	4.36E-02
160	GO:0009737: response to abscisic acid	4.41E-02
161	GO:0048527: lateral root development	4.66E-02
162	GO:0010043: response to zinc ion	4.66E-02
163	GO:0009867: jasmonic acid mediated signaling pathway	4.97E-02
164	GO:0045087: innate immune response	4.97E-02
165	GO:0016051: carbohydrate biosynthetic process	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
4	GO:0050334: thiaminase activity	0.00E+00
5	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
6	GO:0005046: KDEL sequence binding	0.00E+00
7	GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity	0.00E+00
8	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
9	GO:0034338: short-chain carboxylesterase activity	0.00E+00
10	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
11	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
12	GO:0033759: flavone synthase activity	0.00E+00
13	GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity	0.00E+00
14	GO:0102391: decanoate--CoA ligase activity	1.56E-04
15	GO:0004467: long-chain fatty acid-CoA ligase activity	2.04E-04
16	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.70E-04
17	GO:0070401: NADP+ binding	2.70E-04
18	GO:0004348: glucosylceramidase activity	2.70E-04
19	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	2.70E-04
20	GO:0015168: glycerol transmembrane transporter activity	2.70E-04
21	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.70E-04
22	GO:0016229: steroid dehydrogenase activity	2.70E-04
23	GO:0010179: IAA-Ala conjugate hydrolase activity	2.70E-04
24	GO:0004630: phospholipase D activity	3.19E-04
25	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.19E-04
26	GO:0008142: oxysterol binding	3.19E-04
27	GO:0003994: aconitate hydratase activity	5.94E-04
28	GO:0032934: sterol binding	5.94E-04
29	GO:0052691: UDP-arabinopyranose mutase activity	5.94E-04
30	GO:0008428: ribonuclease inhibitor activity	5.94E-04
31	GO:0050736: O-malonyltransferase activity	5.94E-04
32	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.94E-04
33	GO:0004617: phosphoglycerate dehydrogenase activity	5.94E-04
34	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	9.62E-04
35	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.62E-04
36	GO:0004478: methionine adenosyltransferase activity	9.62E-04
37	GO:0008061: chitin binding	9.99E-04
38	GO:0031418: L-ascorbic acid binding	1.23E-03
39	GO:0005354: galactose transmembrane transporter activity	1.38E-03
40	GO:0035529: NADH pyrophosphatase activity	1.38E-03
41	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.38E-03
42	GO:0016149: translation release factor activity, codon specific	1.38E-03
43	GO:0008106: alcohol dehydrogenase (NADP+) activity	1.38E-03
44	GO:0005460: UDP-glucose transmembrane transporter activity	1.38E-03
45	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.38E-03
46	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.38E-03
47	GO:0008810: cellulase activity	1.76E-03
48	GO:0046923: ER retention sequence binding	1.84E-03
49	GO:0016866: intramolecular transferase activity	1.84E-03
50	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.84E-03
51	GO:0005459: UDP-galactose transmembrane transporter activity	2.35E-03
52	GO:0015145: monosaccharide transmembrane transporter activity	2.35E-03
53	GO:0008948: oxaloacetate decarboxylase activity	2.35E-03
54	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.35E-03
55	GO:0004623: phospholipase A2 activity	2.35E-03
56	GO:0018685: alkane 1-monooxygenase activity	2.35E-03
57	GO:0047631: ADP-ribose diphosphatase activity	2.35E-03
58	GO:0000210: NAD+ diphosphatase activity	2.90E-03
59	GO:0005347: ATP transmembrane transporter activity	3.49E-03
60	GO:0004656: procollagen-proline 4-dioxygenase activity	3.49E-03
61	GO:0015217: ADP transmembrane transporter activity	3.49E-03
62	GO:0008237: metallopeptidase activity	3.83E-03
63	GO:0008320: protein transmembrane transporter activity	4.12E-03
64	GO:0052747: sinapyl alcohol dehydrogenase activity	4.77E-03
65	GO:0004033: aldo-keto reductase (NADP) activity	4.77E-03
66	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.77E-03
67	GO:0030247: polysaccharide binding	5.06E-03
68	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.20E-03
69	GO:0003747: translation release factor activity	6.20E-03
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	7.11E-03
71	GO:0003993: acid phosphatase activity	7.44E-03
72	GO:0004864: protein phosphatase inhibitor activity	7.75E-03
73	GO:0004568: chitinase activity	7.75E-03
74	GO:0051539: 4 iron, 4 sulfur cluster binding	8.11E-03
75	GO:0045551: cinnamyl-alcohol dehydrogenase activity	9.44E-03
76	GO:0005198: structural molecule activity	1.03E-02
77	GO:0016887: ATPase activity	1.09E-02
78	GO:0051287: NAD binding	1.11E-02
79	GO:0003712: transcription cofactor activity	1.22E-02
80	GO:0005217: intracellular ligand-gated ion channel activity	1.22E-02
81	GO:0004970: ionotropic glutamate receptor activity	1.22E-02
82	GO:0001046: core promoter sequence-specific DNA binding	1.42E-02
83	GO:0051536: iron-sulfur cluster binding	1.42E-02
84	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.73E-02
85	GO:0015035: protein disulfide oxidoreductase activity	1.82E-02
86	GO:0042803: protein homodimerization activity	1.86E-02
87	GO:0003756: protein disulfide isomerase activity	1.95E-02
88	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.95E-02
89	GO:0003727: single-stranded RNA binding	1.95E-02
90	GO:0005102: receptor binding	2.07E-02
91	GO:0047134: protein-disulfide reductase activity	2.07E-02
92	GO:0016758: transferase activity, transferring hexosyl groups	2.16E-02
93	GO:0005507: copper ion binding	2.27E-02
94	GO:0005355: glucose transmembrane transporter activity	2.43E-02
95	GO:0010181: FMN binding	2.43E-02
96	GO:0004791: thioredoxin-disulfide reductase activity	2.43E-02
97	GO:0004872: receptor activity	2.55E-02
98	GO:0015297: antiporter activity	2.92E-02
99	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.94E-02
100	GO:0016791: phosphatase activity	3.07E-02
101	GO:0008483: transaminase activity	3.21E-02
102	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.21E-02
103	GO:0016413: O-acetyltransferase activity	3.34E-02
104	GO:0016597: amino acid binding	3.34E-02
105	GO:0008194: UDP-glycosyltransferase activity	3.42E-02
106	GO:0046872: metal ion binding	3.71E-02
107	GO:0005506: iron ion binding	3.72E-02
108	GO:0004806: triglyceride lipase activity	3.91E-02
109	GO:0015238: drug transmembrane transporter activity	4.36E-02
110	GO:0005096: GTPase activator activity	4.36E-02
111	GO:0003746: translation elongation factor activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	4.06E-06
2	GO:0005789: endoplasmic reticulum membrane	1.30E-05
3	GO:0017119: Golgi transport complex	2.16E-05
4	GO:0005783: endoplasmic reticulum	3.77E-05
5	GO:0016021: integral component of membrane	7.77E-05
6	GO:0005801: cis-Golgi network	1.56E-04
7	GO:0045252: oxoglutarate dehydrogenase complex	2.70E-04
8	GO:0005788: endoplasmic reticulum lumen	5.53E-04
9	GO:0030134: ER to Golgi transport vesicle	5.94E-04
10	GO:0005886: plasma membrane	6.25E-04
11	GO:0005829: cytosol	7.46E-04
12	GO:0030658: transport vesicle membrane	1.38E-03
13	GO:0000164: protein phosphatase type 1 complex	2.35E-03
14	GO:0009506: plasmodesma	3.10E-03
15	GO:0009986: cell surface	4.12E-03
16	GO:0005623: cell	4.18E-03
17	GO:0005779: integral component of peroxisomal membrane	5.47E-03
18	GO:0005811: lipid particle	5.47E-03
19	GO:0030665: clathrin-coated vesicle membrane	6.96E-03
20	GO:0046658: anchored component of plasma membrane	8.69E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	1.22E-02
22	GO:0005774: vacuolar membrane	1.66E-02
23	GO:0031410: cytoplasmic vesicle	1.73E-02
24	GO:0031965: nuclear membrane	2.55E-02
25	GO:0019898: extrinsic component of membrane	2.55E-02
26	GO:0031225: anchored component of membrane	2.60E-02
27	GO:0005802: trans-Golgi network	2.70E-02
28	GO:0071944: cell periphery	2.94E-02
29	GO:0005768: endosome	3.26E-02
30	GO:0016020: membrane	3.82E-02
31	GO:0000151: ubiquitin ligase complex	4.21E-02
32	GO:0005737: cytoplasm	4.60E-02
33	GO:0000325: plant-type vacuole	4.66E-02