GO Enrichment Analysis of Co-expressed Genes with
AT3G62600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006654: phosphatidic acid biosynthetic process | 0.00E+00 |
| 2 | GO:0080149: sucrose induced translational repression | 0.00E+00 |
| 3 | GO:0072334: UDP-galactose transmembrane transport | 2.19E-06 |
| 4 | GO:0016192: vesicle-mediated transport | 1.14E-05 |
| 5 | GO:0030968: endoplasmic reticulum unfolded protein response | 3.64E-05 |
| 6 | GO:0044376: RNA polymerase II complex import to nucleus | 6.42E-05 |
| 7 | GO:0000077: DNA damage checkpoint | 6.42E-05 |
| 8 | GO:0042350: GDP-L-fucose biosynthetic process | 6.42E-05 |
| 9 | GO:1990022: RNA polymerase III complex localization to nucleus | 6.42E-05 |
| 10 | GO:0043182: vacuolar sequestering of sodium ion | 6.42E-05 |
| 11 | GO:0042853: L-alanine catabolic process | 1.55E-04 |
| 12 | GO:0040020: regulation of meiotic nuclear division | 1.55E-04 |
| 13 | GO:0006457: protein folding | 1.56E-04 |
| 14 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 2.63E-04 |
| 15 | GO:0009410: response to xenobiotic stimulus | 2.63E-04 |
| 16 | GO:0009226: nucleotide-sugar biosynthetic process | 3.82E-04 |
| 17 | GO:1901002: positive regulation of response to salt stress | 5.10E-04 |
| 18 | GO:1902584: positive regulation of response to water deprivation | 5.10E-04 |
| 19 | GO:0006621: protein retention in ER lumen | 5.10E-04 |
| 20 | GO:0045927: positive regulation of growth | 6.45E-04 |
| 21 | GO:0047484: regulation of response to osmotic stress | 7.90E-04 |
| 22 | GO:0017148: negative regulation of translation | 9.40E-04 |
| 23 | GO:0034389: lipid particle organization | 9.40E-04 |
| 24 | GO:0006744: ubiquinone biosynthetic process | 1.10E-03 |
| 25 | GO:0080186: developmental vegetative growth | 1.10E-03 |
| 26 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 1.26E-03 |
| 27 | GO:0015780: nucleotide-sugar transport | 1.62E-03 |
| 28 | GO:0010332: response to gamma radiation | 1.62E-03 |
| 29 | GO:0090332: stomatal closure | 1.81E-03 |
| 30 | GO:0043085: positive regulation of catalytic activity | 2.21E-03 |
| 31 | GO:0000266: mitochondrial fission | 2.42E-03 |
| 32 | GO:0015031: protein transport | 2.72E-03 |
| 33 | GO:0007033: vacuole organization | 3.09E-03 |
| 34 | GO:0009058: biosynthetic process | 3.22E-03 |
| 35 | GO:0000162: tryptophan biosynthetic process | 3.33E-03 |
| 36 | GO:0034976: response to endoplasmic reticulum stress | 3.33E-03 |
| 37 | GO:0009790: embryo development | 3.56E-03 |
| 38 | GO:0009863: salicylic acid mediated signaling pathway | 3.57E-03 |
| 39 | GO:0030150: protein import into mitochondrial matrix | 3.57E-03 |
| 40 | GO:0008299: isoprenoid biosynthetic process | 3.82E-03 |
| 41 | GO:0006413: translational initiation | 3.92E-03 |
| 42 | GO:0009814: defense response, incompatible interaction | 4.34E-03 |
| 43 | GO:0030433: ubiquitin-dependent ERAD pathway | 4.34E-03 |
| 44 | GO:0009411: response to UV | 4.60E-03 |
| 45 | GO:0009306: protein secretion | 4.87E-03 |
| 46 | GO:0007275: multicellular organism development | 5.27E-03 |
| 47 | GO:0006623: protein targeting to vacuole | 6.31E-03 |
| 48 | GO:0001666: response to hypoxia | 8.54E-03 |
| 49 | GO:0009816: defense response to bacterium, incompatible interaction | 8.88E-03 |
| 50 | GO:0006906: vesicle fusion | 9.22E-03 |
| 51 | GO:0006887: exocytosis | 1.37E-02 |
| 52 | GO:0006631: fatty acid metabolic process | 1.37E-02 |
| 53 | GO:0010114: response to red light | 1.45E-02 |
| 54 | GO:0009744: response to sucrose | 1.45E-02 |
| 55 | GO:0000209: protein polyubiquitination | 1.50E-02 |
| 56 | GO:0008643: carbohydrate transport | 1.54E-02 |
| 57 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.66E-02 |
| 58 | GO:0006486: protein glycosylation | 1.80E-02 |
| 59 | GO:0010224: response to UV-B | 1.84E-02 |
| 60 | GO:0009555: pollen development | 2.11E-02 |
| 61 | GO:0009553: embryo sac development | 2.26E-02 |
| 62 | GO:0051301: cell division | 2.30E-02 |
| 63 | GO:0006470: protein dephosphorylation | 3.75E-02 |
| 64 | GO:0009860: pollen tube growth | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0005046: KDEL sequence binding | 0.00E+00 |
| 3 | GO:0034338: short-chain carboxylesterase activity | 0.00E+00 |
| 4 | GO:0019211: phosphatase activator activity | 0.00E+00 |
| 5 | GO:0005459: UDP-galactose transmembrane transporter activity | 7.07E-06 |
| 6 | GO:0050577: GDP-L-fucose synthase activity | 6.42E-05 |
| 7 | GO:1990381: ubiquitin-specific protease binding | 6.42E-05 |
| 8 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 6.42E-05 |
| 9 | GO:0050347: trans-octaprenyltranstransferase activity | 1.55E-04 |
| 10 | GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity | 1.55E-04 |
| 11 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.55E-04 |
| 12 | GO:0051082: unfolded protein binding | 2.48E-04 |
| 13 | GO:0005460: UDP-glucose transmembrane transporter activity | 3.82E-04 |
| 14 | GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity | 3.82E-04 |
| 15 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 5.10E-04 |
| 16 | GO:0004659: prenyltransferase activity | 5.10E-04 |
| 17 | GO:0004834: tryptophan synthase activity | 5.10E-04 |
| 18 | GO:0046923: ER retention sequence binding | 5.10E-04 |
| 19 | GO:0004623: phospholipase A2 activity | 6.45E-04 |
| 20 | GO:0004656: procollagen-proline 4-dioxygenase activity | 9.40E-04 |
| 21 | GO:0008320: protein transmembrane transporter activity | 1.10E-03 |
| 22 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 1.10E-03 |
| 23 | GO:0008417: fucosyltransferase activity | 1.62E-03 |
| 24 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.62E-03 |
| 25 | GO:0003924: GTPase activity | 1.84E-03 |
| 26 | GO:0004161: dimethylallyltranstransferase activity | 2.21E-03 |
| 27 | GO:0022857: transmembrane transporter activity | 2.31E-03 |
| 28 | GO:0005388: calcium-transporting ATPase activity | 2.64E-03 |
| 29 | GO:0004725: protein tyrosine phosphatase activity | 3.33E-03 |
| 30 | GO:0030170: pyridoxal phosphate binding | 3.39E-03 |
| 31 | GO:0031418: L-ascorbic acid binding | 3.57E-03 |
| 32 | GO:0051087: chaperone binding | 3.82E-03 |
| 33 | GO:0003756: protein disulfide isomerase activity | 4.87E-03 |
| 34 | GO:0003743: translation initiation factor activity | 4.90E-03 |
| 35 | GO:0005102: receptor binding | 5.15E-03 |
| 36 | GO:0050662: coenzyme binding | 6.01E-03 |
| 37 | GO:0016853: isomerase activity | 6.01E-03 |
| 38 | GO:0004872: receptor activity | 6.31E-03 |
| 39 | GO:0042803: protein homodimerization activity | 1.01E-02 |
| 40 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.03E-02 |
| 41 | GO:0004222: metalloendopeptidase activity | 1.10E-02 |
| 42 | GO:0050897: cobalt ion binding | 1.14E-02 |
| 43 | GO:0003746: translation elongation factor activity | 1.22E-02 |
| 44 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.22E-02 |
| 45 | GO:0000149: SNARE binding | 1.29E-02 |
| 46 | GO:0005484: SNAP receptor activity | 1.45E-02 |
| 47 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.54E-02 |
| 48 | GO:0005198: structural molecule activity | 1.58E-02 |
| 49 | GO:0045735: nutrient reservoir activity | 2.02E-02 |
| 50 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.76E-02 |
| 51 | GO:0005507: copper ion binding | 3.01E-02 |
| 52 | GO:0015297: antiporter activity | 3.30E-02 |
| 53 | GO:0005525: GTP binding | 3.48E-02 |
| 54 | GO:0008017: microtubule binding | 3.52E-02 |
| 55 | GO:0042802: identical protein binding | 4.04E-02 |
| 56 | GO:0046982: protein heterodimerization activity | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005801: cis-Golgi network | 1.57E-05 |
| 2 | GO:0005783: endoplasmic reticulum | 5.37E-05 |
| 3 | GO:0000836: Hrd1p ubiquitin ligase complex | 6.42E-05 |
| 4 | GO:0044322: endoplasmic reticulum quality control compartment | 6.42E-05 |
| 5 | GO:0001405: presequence translocase-associated import motor | 6.42E-05 |
| 6 | GO:0005789: endoplasmic reticulum membrane | 1.49E-04 |
| 7 | GO:0030134: ER to Golgi transport vesicle | 1.55E-04 |
| 8 | GO:0036513: Derlin-1 retrotranslocation complex | 3.82E-04 |
| 9 | GO:0005788: endoplasmic reticulum lumen | 6.66E-04 |
| 10 | GO:0005794: Golgi apparatus | 8.48E-04 |
| 11 | GO:0030173: integral component of Golgi membrane | 9.40E-04 |
| 12 | GO:0005811: lipid particle | 1.44E-03 |
| 13 | GO:0031901: early endosome membrane | 1.62E-03 |
| 14 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.09E-03 |
| 15 | GO:0016592: mediator complex | 6.92E-03 |
| 16 | GO:0032580: Golgi cisterna membrane | 7.55E-03 |
| 17 | GO:0005874: microtubule | 7.76E-03 |
| 18 | GO:0005768: endosome | 8.11E-03 |
| 19 | GO:0016021: integral component of membrane | 8.89E-03 |
| 20 | GO:0005774: vacuolar membrane | 1.24E-02 |
| 21 | GO:0031201: SNARE complex | 1.37E-02 |
| 22 | GO:0005739: mitochondrion | 1.62E-02 |
| 23 | GO:0005834: heterotrimeric G-protein complex | 2.12E-02 |
| 24 | GO:0005623: cell | 2.76E-02 |
| 25 | GO:0009524: phragmoplast | 2.81E-02 |
| 26 | GO:0016020: membrane | 3.13E-02 |
| 27 | GO:0005759: mitochondrial matrix | 3.19E-02 |
| 28 | GO:0005802: trans-Golgi network | 3.39E-02 |
| 29 | GO:0005615: extracellular space | 3.69E-02 |
| 30 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.96E-02 |