Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT3G61860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0006654: phosphatidic acid biosynthetic process0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
7GO:0005993: trehalose catabolic process0.00E+00
8GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
9GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
10GO:0009312: oligosaccharide biosynthetic process0.00E+00
11GO:0032515: negative regulation of phosphoprotein phosphatase activity0.00E+00
12GO:0046865: terpenoid transport0.00E+00
13GO:0006983: ER overload response0.00E+00
14GO:0018063: cytochrome c-heme linkage0.00E+00
15GO:1902009: positive regulation of toxin transport0.00E+00
16GO:0051553: flavone biosynthetic process0.00E+00
17GO:0042742: defense response to bacterium1.18E-05
18GO:0010112: regulation of systemic acquired resistance4.26E-05
19GO:0002237: response to molecule of bacterial origin1.63E-04
20GO:0009751: response to salicylic acid3.57E-04
21GO:0071456: cellular response to hypoxia3.83E-04
22GO:1900057: positive regulation of leaf senescence4.45E-04
23GO:0043547: positive regulation of GTPase activity4.53E-04
24GO:1990641: response to iron ion starvation4.53E-04
25GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.53E-04
26GO:0033306: phytol metabolic process4.53E-04
27GO:0010230: alternative respiration4.53E-04
28GO:0050691: regulation of defense response to virus by host4.53E-04
29GO:1902065: response to L-glutamate4.53E-04
30GO:0009968: negative regulation of signal transduction4.53E-04
31GO:1990542: mitochondrial transmembrane transport4.53E-04
32GO:0032107: regulation of response to nutrient levels4.53E-04
33GO:0015031: protein transport4.63E-04
34GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.55E-04
35GO:0051707: response to other organism6.01E-04
36GO:0010200: response to chitin6.97E-04
37GO:0010193: response to ozone8.46E-04
38GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.56E-04
39GO:0010155: regulation of proton transport9.79E-04
40GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.79E-04
41GO:0080181: lateral root branching9.79E-04
42GO:0006024: glycosaminoglycan biosynthetic process9.79E-04
43GO:0055088: lipid homeostasis9.79E-04
44GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex9.79E-04
45GO:0006101: citrate metabolic process9.79E-04
46GO:0015908: fatty acid transport9.79E-04
47GO:0043066: negative regulation of apoptotic process9.79E-04
48GO:0044419: interspecies interaction between organisms9.79E-04
49GO:0051258: protein polymerization9.79E-04
50GO:0015012: heparan sulfate proteoglycan biosynthetic process9.79E-04
51GO:0071668: plant-type cell wall assembly9.79E-04
52GO:0080183: response to photooxidative stress9.79E-04
53GO:0009617: response to bacterium1.12E-03
54GO:0051607: defense response to virus1.25E-03
55GO:0000266: mitochondrial fission1.47E-03
56GO:0045037: protein import into chloroplast stroma1.47E-03
57GO:0015783: GDP-fucose transport1.59E-03
58GO:0009410: response to xenobiotic stimulus1.59E-03
59GO:0015692: lead ion transport1.59E-03
60GO:0052546: cell wall pectin metabolic process1.59E-03
61GO:0015695: organic cation transport1.59E-03
62GO:0080168: abscisic acid transport1.59E-03
63GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.59E-03
64GO:0080163: regulation of protein serine/threonine phosphatase activity1.59E-03
65GO:0006065: UDP-glucuronate biosynthetic process1.59E-03
66GO:0070301: cellular response to hydrogen peroxide2.31E-03
67GO:0051639: actin filament network formation2.31E-03
68GO:0002239: response to oomycetes2.31E-03
69GO:0010731: protein glutathionylation2.31E-03
70GO:0015696: ammonium transport2.31E-03
71GO:0071323: cellular response to chitin2.31E-03
72GO:0080024: indolebutyric acid metabolic process2.31E-03
73GO:0055070: copper ion homeostasis2.31E-03
74GO:0001676: long-chain fatty acid metabolic process2.31E-03
75GO:0055089: fatty acid homeostasis2.31E-03
76GO:0010116: positive regulation of abscisic acid biosynthetic process2.31E-03
77GO:0000162: tryptophan biosynthetic process2.35E-03
78GO:0009863: salicylic acid mediated signaling pathway2.61E-03
79GO:0030150: protein import into mitochondrial matrix2.61E-03
80GO:0051764: actin crosslink formation3.10E-03
81GO:0072488: ammonium transmembrane transport3.10E-03
82GO:0022622: root system development3.10E-03
83GO:1901002: positive regulation of response to salt stress3.10E-03
84GO:0006621: protein retention in ER lumen3.10E-03
85GO:0015867: ATP transport3.10E-03
86GO:0006631: fatty acid metabolic process3.18E-03
87GO:0009814: defense response, incompatible interaction3.47E-03
88GO:0010150: leaf senescence3.73E-03
89GO:0034052: positive regulation of plant-type hypersensitive response3.98E-03
90GO:0006097: glyoxylate cycle3.98E-03
91GO:0009229: thiamine diphosphate biosynthetic process3.98E-03
92GO:0007275: multicellular organism development4.13E-03
93GO:0031347: regulation of defense response4.51E-03
94GO:0015866: ADP transport4.92E-03
95GO:0006777: Mo-molybdopterin cofactor biosynthetic process4.92E-03
96GO:0010256: endomembrane system organization4.92E-03
97GO:0045040: protein import into mitochondrial outer membrane4.92E-03
98GO:1900425: negative regulation of defense response to bacterium4.92E-03
99GO:0033365: protein localization to organelle4.92E-03
100GO:0009228: thiamine biosynthetic process4.92E-03
101GO:0009643: photosynthetic acclimation4.92E-03
102GO:0009759: indole glucosinolate biosynthetic process4.92E-03
103GO:0010182: sugar mediated signaling pathway5.20E-03
104GO:0010224: response to UV-B5.40E-03
105GO:0045926: negative regulation of growth5.94E-03
106GO:0006623: protein targeting to vacuole6.00E-03
107GO:0002229: defense response to oomycetes6.43E-03
108GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway7.03E-03
109GO:0046470: phosphatidylcholine metabolic process7.03E-03
110GO:1900056: negative regulation of leaf senescence7.03E-03
111GO:2000014: regulation of endosperm development7.03E-03
112GO:0000122: negative regulation of transcription from RNA polymerase II promoter7.03E-03
113GO:0006333: chromatin assembly or disassembly7.03E-03
114GO:1902074: response to salt7.03E-03
115GO:0010044: response to aluminum ion7.03E-03
116GO:0016559: peroxisome fission8.18E-03
117GO:0009819: drought recovery8.18E-03
118GO:0009850: auxin metabolic process8.18E-03
119GO:0006605: protein targeting8.18E-03
120GO:0045010: actin nucleation8.18E-03
121GO:0031540: regulation of anthocyanin biosynthetic process8.18E-03
122GO:0006102: isocitrate metabolic process8.18E-03
123GO:0010208: pollen wall assembly9.38E-03
124GO:0010120: camalexin biosynthetic process9.38E-03
125GO:0006997: nucleus organization9.38E-03
126GO:0010204: defense response signaling pathway, resistance gene-independent9.38E-03
127GO:0017004: cytochrome complex assembly9.38E-03
128GO:0010029: regulation of seed germination9.87E-03
129GO:0009816: defense response to bacterium, incompatible interaction9.87E-03
130GO:0009627: systemic acquired resistance1.04E-02
131GO:0015780: nucleotide-sugar transport1.07E-02
132GO:0007338: single fertilization1.07E-02
133GO:0019432: triglyceride biosynthetic process1.07E-02
134GO:0000902: cell morphogenesis1.07E-02
135GO:0009086: methionine biosynthetic process1.20E-02
136GO:0008202: steroid metabolic process1.20E-02
137GO:0009737: response to abscisic acid1.27E-02
138GO:0051555: flavonol biosynthetic process1.34E-02
139GO:0009870: defense response signaling pathway, resistance gene-dependent1.34E-02
140GO:0006032: chitin catabolic process1.34E-02
141GO:0009688: abscisic acid biosynthetic process1.34E-02
142GO:0043069: negative regulation of programmed cell death1.34E-02
143GO:0009684: indoleacetic acid biosynthetic process1.48E-02
144GO:0000038: very long-chain fatty acid metabolic process1.48E-02
145GO:0006913: nucleocytoplasmic transport1.48E-02
146GO:0019684: photosynthesis, light reaction1.48E-02
147GO:0009089: lysine biosynthetic process via diaminopimelate1.48E-02
148GO:0045087: innate immune response1.55E-02
149GO:0006979: response to oxidative stress1.76E-02
150GO:0006829: zinc II ion transport1.79E-02
151GO:2000012: regulation of auxin polar transport1.79E-02
152GO:0010102: lateral root morphogenesis1.79E-02
153GO:0006626: protein targeting to mitochondrion1.79E-02
154GO:0030036: actin cytoskeleton organization1.79E-02
155GO:0018107: peptidyl-threonine phosphorylation1.79E-02
156GO:0009408: response to heat1.82E-02
157GO:0007166: cell surface receptor signaling pathway1.93E-02
158GO:0007015: actin filament organization1.95E-02
159GO:0009753: response to jasmonic acid2.02E-02
160GO:0046688: response to copper ion2.12E-02
161GO:0090351: seedling development2.12E-02
162GO:0070588: calcium ion transmembrane transport2.12E-02
163GO:0009636: response to toxic substance2.25E-02
164GO:0034976: response to endoplasmic reticulum stress2.29E-02
165GO:0006636: unsaturated fatty acid biosynthetic process2.29E-02
166GO:0006855: drug transmembrane transport2.34E-02
167GO:0000027: ribosomal large subunit assembly2.46E-02
168GO:0080147: root hair cell development2.46E-02
169GO:0051017: actin filament bundle assembly2.46E-02
170GO:0006289: nucleotide-excision repair2.46E-02
171GO:2000377: regulation of reactive oxygen species metabolic process2.46E-02
172GO:0009846: pollen germination2.52E-02
173GO:0006825: copper ion transport2.64E-02
174GO:0050832: defense response to fungus2.68E-02
175GO:0006486: protein glycosylation2.70E-02
176GO:0006334: nucleosome assembly2.82E-02
177GO:0009269: response to desiccation2.82E-02
178GO:0016998: cell wall macromolecule catabolic process2.82E-02
179GO:0031348: negative regulation of defense response3.01E-02
180GO:0006970: response to osmotic stress3.10E-02
181GO:0006012: galactose metabolic process3.20E-02
182GO:0009723: response to ethylene3.39E-02
183GO:0042127: regulation of cell proliferation3.40E-02
184GO:0009306: protein secretion3.40E-02
185GO:0009626: plant-type hypersensitive response3.41E-02
186GO:0009620: response to fungus3.51E-02
187GO:0006810: transport3.56E-02
188GO:0010118: stomatal movement3.81E-02
189GO:0042391: regulation of membrane potential3.81E-02
190GO:0018105: peptidyl-serine phosphorylation3.96E-02
191GO:0009960: endosperm development4.01E-02
192GO:0006520: cellular amino acid metabolic process4.01E-02
193GO:0010197: polar nucleus fusion4.01E-02
194GO:0009738: abscisic acid-activated signaling pathway4.02E-02
195GO:0009611: response to wounding4.35E-02
196GO:0009414: response to water deprivation4.40E-02
197GO:0009749: response to glucose4.44E-02
198GO:0071554: cell wall organization or biogenesis4.66E-02
199GO:0000302: response to reactive oxygen species4.66E-02
200GO:0006635: fatty acid beta-oxidation4.66E-02
201GO:0032502: developmental process4.88E-02
RankGO TermAdjusted P value
1GO:0033759: flavone synthase activity0.00E+00
2GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
3GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
4GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity0.00E+00
5GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
6GO:0050334: thiaminase activity0.00E+00
7GO:0004865: protein serine/threonine phosphatase inhibitor activity0.00E+00
8GO:0004555: alpha,alpha-trehalase activity0.00E+00
9GO:0005212: structural constituent of eye lens0.00E+00
10GO:0005046: KDEL sequence binding0.00E+00
11GO:0034338: short-chain carboxylesterase activity0.00E+00
12GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
13GO:0004834: tryptophan synthase activity1.18E-04
14GO:0005509: calcium ion binding1.73E-04
15GO:0102391: decanoate--CoA ligase activity3.46E-04
16GO:0004656: procollagen-proline 4-dioxygenase activity3.46E-04
17GO:0004467: long-chain fatty acid-CoA ligase activity4.45E-04
18GO:0015927: trehalase activity4.53E-04
19GO:0047150: betaine-homocysteine S-methyltransferase activity4.53E-04
20GO:0009000: selenocysteine lyase activity4.53E-04
21GO:0015245: fatty acid transporter activity4.53E-04
22GO:0010285: L,L-diaminopimelate aminotransferase activity4.53E-04
23GO:0016920: pyroglutamyl-peptidase activity4.53E-04
24GO:0003994: aconitate hydratase activity9.79E-04
25GO:0032934: sterol binding9.79E-04
26GO:0050736: O-malonyltransferase activity9.79E-04
27GO:0015036: disulfide oxidoreductase activity9.79E-04
28GO:0048531: beta-1,3-galactosyltransferase activity9.79E-04
29GO:0003979: UDP-glucose 6-dehydrogenase activity1.59E-03
30GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.59E-03
31GO:0004324: ferredoxin-NADP+ reductase activity1.59E-03
32GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.59E-03
33GO:0016531: copper chaperone activity1.59E-03
34GO:0032403: protein complex binding1.59E-03
35GO:0005457: GDP-fucose transmembrane transporter activity1.59E-03
36GO:0030247: polysaccharide binding1.65E-03
37GO:0017077: oxidative phosphorylation uncoupler activity2.31E-03
38GO:0035529: NADH pyrophosphatase activity2.31E-03
39GO:0030527: structural constituent of chromatin2.31E-03
40GO:0010178: IAA-amino acid conjugate hydrolase activity2.31E-03
41GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.55E-03
42GO:0031418: L-ascorbic acid binding2.61E-03
43GO:0001046: core promoter sequence-specific DNA binding2.61E-03
44GO:0030170: pyridoxal phosphate binding2.68E-03
45GO:0046923: ER retention sequence binding3.10E-03
46GO:0004930: G-protein coupled receptor activity3.10E-03
47GO:0030151: molybdenum ion binding3.98E-03
48GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.98E-03
49GO:0004623: phospholipase A2 activity3.98E-03
50GO:0047631: ADP-ribose diphosphatase activity3.98E-03
51GO:0043565: sequence-specific DNA binding4.24E-03
52GO:0000210: NAD+ diphosphatase activity4.92E-03
53GO:0008519: ammonium transmembrane transporter activity4.92E-03
54GO:0015217: ADP transmembrane transporter activity5.94E-03
55GO:0004144: diacylglycerol O-acyltransferase activity5.94E-03
56GO:0005347: ATP transmembrane transporter activity5.94E-03
57GO:0003978: UDP-glucose 4-epimerase activity5.94E-03
58GO:0047893: flavonol 3-O-glucosyltransferase activity8.18E-03
59GO:0052747: sinapyl alcohol dehydrogenase activity8.18E-03
60GO:0004869: cysteine-type endopeptidase inhibitor activity8.18E-03
61GO:0004708: MAP kinase kinase activity8.18E-03
62GO:0008483: transaminase activity8.30E-03
63GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.30E-03
64GO:0008142: oxysterol binding9.38E-03
65GO:0004630: phospholipase D activity9.38E-03
66GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.38E-03
67GO:0008375: acetylglucosaminyltransferase activity1.04E-02
68GO:0004806: triglyceride lipase activity1.10E-02
69GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.22E-02
70GO:0003700: transcription factor activity, sequence-specific DNA binding1.22E-02
71GO:0030234: enzyme regulator activity1.34E-02
72GO:0004568: chitinase activity1.34E-02
73GO:0004864: protein phosphatase inhibitor activity1.34E-02
74GO:0015297: antiporter activity1.54E-02
75GO:0045551: cinnamyl-alcohol dehydrogenase activity1.63E-02
76GO:0005388: calcium-transporting ATPase activity1.79E-02
77GO:0015266: protein channel activity1.79E-02
78GO:0004022: alcohol dehydrogenase (NAD) activity1.79E-02
79GO:0030552: cAMP binding2.12E-02
80GO:0030553: cGMP binding2.12E-02
81GO:0008061: chitin binding2.12E-02
82GO:0003712: transcription cofactor activity2.12E-02
83GO:0051287: NAD binding2.43E-02
84GO:0005216: ion channel activity2.64E-02
85GO:0015079: potassium ion transmembrane transporter activity2.64E-02
86GO:0008324: cation transmembrane transporter activity2.64E-02
87GO:0005516: calmodulin binding2.81E-02
88GO:0035251: UDP-glucosyltransferase activity2.82E-02
89GO:0004707: MAP kinase activity2.82E-02
90GO:0005515: protein binding2.94E-02
91GO:0003682: chromatin binding3.03E-02
92GO:0008810: cellulase activity3.20E-02
93GO:0004499: N,N-dimethylaniline monooxygenase activity3.40E-02
94GO:0005102: receptor binding3.60E-02
95GO:0016874: ligase activity3.62E-02
96GO:0005249: voltage-gated potassium channel activity3.81E-02
97GO:0030551: cyclic nucleotide binding3.81E-02
98GO:0046873: metal ion transmembrane transporter activity4.01E-02
99GO:0050662: coenzyme binding4.23E-02
100GO:0004872: receptor activity4.44E-02
101GO:0042803: protein homodimerization activity4.87E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane1.80E-07
2GO:0005789: endoplasmic reticulum membrane7.52E-05
3GO:0005794: Golgi apparatus9.93E-05
4GO:0000813: ESCRT I complex1.82E-04
5GO:0000164: protein phosphatase type 1 complex1.82E-04
6GO:0030665: clathrin-coated vesicle membrane9.56E-04
7GO:0031314: extrinsic component of mitochondrial inner membrane9.79E-04
8GO:0017119: Golgi transport complex1.11E-03
9GO:0005743: mitochondrial inner membrane1.22E-03
10GO:0032432: actin filament bundle2.31E-03
11GO:0030658: transport vesicle membrane2.31E-03
12GO:0005741: mitochondrial outer membrane3.17E-03
13GO:0031902: late endosome membrane3.18E-03
14GO:0005801: cis-Golgi network5.94E-03
15GO:0005885: Arp2/3 protein complex5.94E-03
16GO:0005887: integral component of plasma membrane8.81E-03
17GO:0005779: integral component of peroxisomal membrane9.38E-03
18GO:0005742: mitochondrial outer membrane translocase complex9.38E-03
19GO:0005783: endoplasmic reticulum1.08E-02
20GO:0005886: plasma membrane1.37E-02
21GO:0005884: actin filament1.48E-02
22GO:0031307: integral component of mitochondrial outer membrane1.63E-02
23GO:0005774: vacuolar membrane1.69E-02
24GO:0005795: Golgi stack2.12E-02
25GO:0046658: anchored component of plasma membrane2.32E-02
26GO:0005758: mitochondrial intermembrane space2.46E-02
27GO:0005635: nuclear envelope2.90E-02
28GO:0000139: Golgi membrane3.06E-02
29GO:0005737: cytoplasm3.11E-02
30GO:0005802: trans-Golgi network3.12E-02
31GO:0005744: mitochondrial inner membrane presequence translocase complex3.40E-02
32GO:0009706: chloroplast inner membrane3.84E-02
33GO:0019898: extrinsic component of membrane4.44E-02
34GO:0009504: cell plate4.44E-02
35GO:0031965: nuclear membrane4.44E-02
36GO:0009543: chloroplast thylakoid lumen4.80E-02
37GO:0016592: mediator complex4.88E-02
38GO:0000785: chromatin4.88E-02
39GO:0005623: cell4.92E-02
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Gene type



Gene DE type