co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT3G61470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015979: photosynthesis	7.10E-19
2	GO:0009768: photosynthesis, light harvesting in photosystem I	3.22E-13
3	GO:0018298: protein-chromophore linkage	2.18E-11
4	GO:0010218: response to far red light	6.18E-09
5	GO:0009637: response to blue light	8.55E-09
6	GO:0010114: response to red light	1.54E-08
7	GO:0010196: nonphotochemical quenching	1.00E-06
8	GO:0019684: photosynthesis, light reaction	4.34E-06
9	GO:0009773: photosynthetic electron transport in photosystem I	4.34E-06
10	GO:0019510: S-adenosylhomocysteine catabolic process	9.64E-06
11	GO:0033353: S-adenosylmethionine cycle	2.58E-05
12	GO:0009765: photosynthesis, light harvesting	9.96E-05
13	GO:0009645: response to low light intensity stimulus	2.34E-04
14	GO:0010150: leaf senescence	4.22E-04
15	GO:0072593: reactive oxygen species metabolic process	4.78E-04
16	GO:0018119: peptidyl-cysteine S-nitrosylation	4.78E-04
17	GO:0010207: photosystem II assembly	6.14E-04
18	GO:0006730: one-carbon metabolic process	9.08E-04
19	GO:0009737: response to abscisic acid	1.16E-03
20	GO:0055072: iron ion homeostasis	1.29E-03
21	GO:0009735: response to cytokinin	1.82E-03
22	GO:0009631: cold acclimation	2.26E-03
23	GO:0009644: response to high light intensity	3.01E-03
24	GO:0009409: response to cold	5.35E-03
25	GO:0006633: fatty acid biosynthetic process	6.05E-03
26	GO:0009751: response to salicylic acid	1.32E-02
27	GO:0008152: metabolic process	1.43E-02
28	GO:0042742: defense response to bacterium	3.33E-02

Rank	GO Term	Adjusted P value
1	GO:0031409: pigment binding	1.74E-13
2	GO:0016168: chlorophyll binding	1.19E-11
3	GO:0004013: adenosylhomocysteinase activity	9.64E-06
4	GO:0005534: galactose binding	9.64E-06
5	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.58E-05
6	GO:0016836: hydro-lyase activity	9.96E-05
7	GO:0046872: metal ion binding	6.13E-04
8	GO:0008266: poly(U) RNA binding	6.14E-04
9	GO:0051537: 2 iron, 2 sulfur cluster binding	3.01E-03
10	GO:0051287: NAD binding	3.24E-03
11	GO:0005509: calcium ion binding	3.66E-03
12	GO:0016787: hydrolase activity	8.47E-03
13	GO:0008289: lipid binding	1.69E-02
14	GO:0005516: calmodulin binding	2.69E-02

Rank	GO Term	Adjusted P value
1	GO:0009783: photosystem II antenna complex	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009534: chloroplast thylakoid	5.77E-28
4	GO:0009579: thylakoid	3.27E-23
5	GO:0009535: chloroplast thylakoid membrane	1.65E-21
6	GO:0009941: chloroplast envelope	2.28E-17
7	GO:0009507: chloroplast	6.55E-17
8	GO:0010287: plastoglobule	1.43E-16
9	GO:0009522: photosystem I	5.22E-15
10	GO:0009538: photosystem I reaction center	2.26E-12
11	GO:0030093: chloroplast photosystem I	9.23E-09
12	GO:0030076: light-harvesting complex	3.15E-08
13	GO:0009543: chloroplast thylakoid lumen	1.15E-07
14	GO:0009523: photosystem II	2.24E-07
15	GO:0016020: membrane	4.98E-07
16	GO:0031977: thylakoid lumen	1.69E-06
17	GO:0030095: chloroplast photosystem II	7.22E-06
18	GO:0009570: chloroplast stroma	9.96E-06
19	GO:0009654: photosystem II oxygen evolving complex	1.25E-05
20	GO:0019898: extrinsic component of membrane	3.11E-05
21	GO:0009517: PSII associated light-harvesting complex II	9.96E-05
22	GO:0009533: chloroplast stromal thylakoid	2.34E-04
23	GO:0009508: plastid chromosome	5.68E-04
24	GO:0042651: thylakoid membrane	8.07E-04
25	GO:0009295: nucleoid	1.59E-03
26	GO:0016021: integral component of membrane	1.61E-03
27	GO:0031969: chloroplast membrane	1.02E-02
28	GO:0048046: apoplast	1.44E-02